FFCP PHASE1:Mm9::chr4:116924378..116924412,-: Difference between revisions
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{{FFCP|EntrezGene=381544|HGNC=|MCL_coexpression_id=0|UniProt=Q3V0P4,E9Q963|association_with_transcript=109bp_to_ENSMUST00000077500,ENSMUST00000165128,NM_001033774,NM_001145637,uc008uig.2,uc008uih.1_5end|description=CAGE_peak_1_at_Gm1661_5end|id=chr4:116924378..116924412,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,5.49e-12,8;CL:0000333,2.55e-09,10;CL:0000095,2.55e-09,10;CL:0000243,2.55e-09,10;CL:0000123,2.55e-09,10;CL:0000125,2.55e-09,10;CL:0000030,2.55e-09,10;CL:0000339,2.55e-09,10;CL:0000128,1.81e-08,6;CL:0000126,1.81e-08,6;CL:0000127,1.81e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!5.44e-09!27|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.08e-13,14;UBERON:0000117,1.08e-13,14;UBERON:0000171,1.08e-13,14;UBERON:0000170,1.08e-13,14;UBERON:0005597,1.08e-13,14;UBERON:0000118,1.08e-13,14;UBERON:0005153,9.09e-13,17;UBERON:0005178,7.82e-11,17;UBERON:0005181,7.82e-11,17;UBERON:0002224,7.82e-11,17;UBERON:0000915,7.82e-11,17;UBERON:0008947,7.82e-11,17;UBERON:0003258,7.82e-11,17;UBERON:0005157,1.95e-10,20|phase1_expression=0.960893082628764,0,0,0.60492842261366,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0,0,0,10.4603246885816,0,0,0.319984845586813,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,3.70642765846759,5.05278220289285,6.02732687130279,1.53985063787899,7.18762821824858,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,2.69640099466564,18.0582603501131,0,0,0,0,0.441737081903227,0.244981598429908,0,0,0,0.383062014255563,0,0.263772575460388,0.182975287204819,0,0,0,0.30559649555362,0,0.569486723196412,0.186399445825301,0,0.226714680320357,0.579728977403356,0,0,0,0,0,1.26399978118577,2.72688516124892,2.59786004602869,1.7666978725517,2.67602497575693,2.56652954828636,2.54805239706646,0,0.216491041011214,0.760079596425296,0,1.59857431606684,0.258937883647172,1.63286352971307,0.173485326766136,1.82679286987285,0.922461989024234,1.3565037649736,0.587943535678524,2.63899841792318,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.748953197024114,0.915001205637253,0.251308704225729,0,0,0.83115217823824,0.486723789203273,0.101839363850316,0.497627882440372,0.758168275301024,0,0.130120442962704,0.229902104433473,1.62055916824814,0.90422890701429,0.95251098811859,0.384341160854549,0.187403449119458,0,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0.61734640922383,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.462801338662135,0.697601834251224,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0.841159794256509,0.92614151141356,0.660837565967596,0,0,0.232236671860439,0,0.403367049246685,0.444756087689741,0,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.505892296994058,0.295220295959204,0.784993639206874,0.493588655687202,0,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,5.35784251483154,0,0.325929952884052,0.339490171550376,1.40814148973101,1.84256883185997,2.38043640886014,1.75620283072019,2.36452716159286,1.32878813789265,1.43509291791738,1.14704320301017,3.45369963731791,2.89298117163023,0,0,0.491764273019036,1.10374698521893,0.160550589987792,0.35163505977661,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0.238968797952552,0.445597348164788,0,0.404810701674894,0,0,0,3.83238230062325,0.35613120733451,0.325773918707152,3.95928295134085,0,0.242780636154981,0,0.188605079755898,1.18120757152309,0.307435147943927,0.258428293168221,1.09060118843252,0.356497378384721,0.316036757935816,0,0,1.36175842301515,0.18006109403131,0.646793418913773,0.214337035031592,0.709360934569094,0.178368817602071,0.822745103010605,1.2178597964584,0.469343416127421,0,0,0,0.161464426695906,0.0603129249281559,0.358117032009409,0.656563598980245,0,1.11255181206306,0,0,0,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.330613822901344,0,0,0.621339313086926,62.0062232552609,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.469428954583016,0.13020438484395,0.629156066554265,12.0792060413003,31.1072406758495,0,0,0.205421914329655,0.129920822977795,0,0,0,0.443068581523732,0.201932899896295,0,0.100826185136841,0,0,0,0,0.443971906748129,0.62799699626633,0.503653849092235,0.19318959403219,0.187682475451182,0.549454872801795,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.628839487883947,0.919217542250071,0.44449345560323,1.03017528619447,1.28367683836726,0.505394423527595,1.2673964994512,0.565879024158229,0.561849044819294,0.640251524048693,0.574354689556133,0.952587382566147,0.231768651889711,1.35036454324594,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.715308569841963,0.872078499793971,0.564656282491984,0.676916863133412,1.46342378298218,1.05227884575137,0.407412341537585,0,0.711810108745045,0.394017929502254,2.04615521584845,0.929621047115796,0.385813221962283,1.49886346762768,0.935726433781634,0.429742108096597,0,0,0.463735671240843|short_description=p1@Gm1661}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381544 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q3V0P4,E9Q963 | |||
|association_with_transcript=109bp_to_ENSMUST00000077500,ENSMUST00000165128,NM_001033774,NM_001145637,uc008uig.2,uc008uih.1_5end | |||
|cluster_id=chr4:116924378..116924412,- | |||
|description=CAGE_peak_1_at_Gm1661_5end | |||
|id=chr4:116924378..116924412,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,5.49e-12,8;CL:0000333,2.55e-09,10;CL:0000095,2.55e-09,10;CL:0000243,2.55e-09,10;CL:0000123,2.55e-09,10;CL:0000125,2.55e-09,10;CL:0000030,2.55e-09,10;CL:0000339,2.55e-09,10;CL:0000128,1.81e-08,6;CL:0000126,1.81e-08,6;CL:0000127,1.81e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!5.44e-09!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.08e-13,14;UBERON:0000117,1.08e-13,14;UBERON:0000171,1.08e-13,14;UBERON:0000170,1.08e-13,14;UBERON:0005597,1.08e-13,14;UBERON:0000118,1.08e-13,14;UBERON:0005153,9.09e-13,17;UBERON:0005178,7.82e-11,17;UBERON:0005181,7.82e-11,17;UBERON:0002224,7.82e-11,17;UBERON:0000915,7.82e-11,17;UBERON:0008947,7.82e-11,17;UBERON:0003258,7.82e-11,17;UBERON:0005157,1.95e-10,20 | |||
|phase1_expression=0.960893082628764,0,0,0.60492842261366,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0,0,0,10.4603246885816,0,0,0.319984845586813,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,3.70642765846759,5.05278220289285,6.02732687130279,1.53985063787899,7.18762821824858,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,2.69640099466564,18.0582603501131,0,0,0,0,0.441737081903227,0.244981598429908,0,0,0,0.383062014255563,0,0.263772575460388,0.182975287204819,0,0,0,0.30559649555362,0,0.569486723196412,0.186399445825301,0,0.226714680320357,0.579728977403356,0,0,0,0,0,1.26399978118577,2.72688516124892,2.59786004602869,1.7666978725517,2.67602497575693,2.56652954828636,2.54805239706646,0,0.216491041011214,0.760079596425296,0,1.59857431606684,0.258937883647172,1.63286352971307,0.173485326766136,1.82679286987285,0.922461989024234,1.3565037649736,0.587943535678524,2.63899841792318,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.748953197024114,0.915001205637253,0.251308704225729,0,0,0.83115217823824,0.486723789203273,0.101839363850316,0.497627882440372,0.758168275301024,0,0.130120442962704,0.229902104433473,1.62055916824814,0.90422890701429,0.95251098811859,0.384341160854549,0.187403449119458,0,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0.61734640922383,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.462801338662135,0.697601834251224,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0.841159794256509,0.92614151141356,0.660837565967596,0,0,0.232236671860439,0,0.403367049246685,0.444756087689741,0,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.505892296994058,0.295220295959204,0.784993639206874,0.493588655687202,0,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,5.35784251483154,0,0.325929952884052,0.339490171550376,1.40814148973101,1.84256883185997,2.38043640886014,1.75620283072019,2.36452716159286,1.32878813789265,1.43509291791738,1.14704320301017,3.45369963731791,2.89298117163023,0,0,0.491764273019036,1.10374698521893,0.160550589987792,0.35163505977661,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0.238968797952552,0.445597348164788,0,0.404810701674894,0,0,0,3.83238230062325,0.35613120733451,0.325773918707152,3.95928295134085,0,0.242780636154981,0,0.188605079755898,1.18120757152309,0.307435147943927,0.258428293168221,1.09060118843252,0.356497378384721,0.316036757935816,0,0,1.36175842301515,0.18006109403131,0.646793418913773,0.214337035031592,0.709360934569094,0.178368817602071,0.822745103010605,1.2178597964584,0.469343416127421,0,0,0,0.161464426695906,0.0603129249281559,0.358117032009409,0.656563598980245,0,1.11255181206306,0,0,0,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.330613822901344,0,0,0.621339313086926,62.0062232552609,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.469428954583016,0.13020438484395,0.629156066554265,12.0792060413003,31.1072406758495,0,0,0.205421914329655,0.129920822977795,0,0,0,0.443068581523732,0.201932899896295,0,0.100826185136841,0,0,0,0,0.443971906748129,0.62799699626633,0.503653849092235,0.19318959403219,0.187682475451182,0.549454872801795,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.628839487883947,0.919217542250071,0.44449345560323,1.03017528619447,1.28367683836726,0.505394423527595,1.2673964994512,0.565879024158229,0.561849044819294,0.640251524048693,0.574354689556133,0.952587382566147,0.231768651889711,1.35036454324594,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.715308569841963,0.872078499793971,0.564656282491984,0.676916863133412,1.46342378298218,1.05227884575137,0.407412341537585,0,0.711810108745045,0.394017929502254,2.04615521584845,0.929621047115796,0.385813221962283,1.49886346762768,0.935726433781634,0.429742108096597,0,0,0.463735671240843 | |||
|short_description=p1@Gm1661 | |||
}} |
Latest revision as of 05:36, 26 September 2015
Short description: | p1@Gm1661 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm1661_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 109bp_to_ENSMUST00000077500, ENSMUST00000165128, NM_001033774, NM_001145637, uc008uig.2, uc008uih.1_5end |
EntrezGene: | Gm1661 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 5.49e-12 | 8 |
migratory neural crest cell | 2.55e-09 | 10 |
neuron associated cell | 2.55e-09 | 10 |
glial cell (sensu Vertebrata) | 2.55e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 2.55e-09 | 10 |
glial cell | 2.55e-09 | 10 |
glioblast | 2.55e-09 | 10 |
glioblast (sensu Vertebrata) | 2.55e-09 | 10 |
oligodendrocyte | 1.81e-08 | 6 |
macroglial cell | 1.81e-08 | 6 |
astrocyte | 1.81e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lung | 1.08e-13 | 14 |
respiratory tube | 1.08e-13 | 14 |
respiration organ | 1.08e-13 | 14 |
pair of lungs | 1.08e-13 | 14 |
lung primordium | 1.08e-13 | 14 |
lung bud | 1.08e-13 | 14 |
epithelial bud | 9.09e-13 | 17 |
thoracic cavity element | 7.82e-11 | 17 |
thoracic segment organ | 7.82e-11 | 17 |
thoracic cavity | 7.82e-11 | 17 |
thoracic segment of trunk | 7.82e-11 | 17 |
respiratory primordium | 7.82e-11 | 17 |
endoderm of foregut | 7.82e-11 | 17 |
epithelial fold | 1.95e-10 | 20 |