FFCP PHASE1:Mm9::chr10:59756164..59756188,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:59756164..59756188,+
|short_description=p@chr10:59756164..59756188,+
|description=CAGE_peak_at_chr10:59756164..59756188,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:59756164..59756188,+ | |||
|description=CAGE_peak_at_chr10:59756164..59756188,+ | |||
|id=chr10:59756164..59756188,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.62e-12!50;CL:0002319!1.77e-09!43;CL:0000221!3.62e-09!44;CL:0000133!3.62e-09!44;CL:0002371!6.75e-09!118;CL:0002321!1.13e-08!70;CL:0000220!1.13e-08!70;CL:0000548!2.12e-08!115;CL:0000004!2.12e-08!115;CL:0000255!2.12e-08!115;CL:0000144!3.38e-08!121;CL:0000012!3.38e-08!121;CL:0000393!1.32e-07!39;CL:0000211!1.32e-07!39;CL:0000723!2.43e-07!91;CL:0000048!2.43e-07!91;CL:0000034!2.88e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.30e-10,70;CL:0002319,1.67e-10,43;CL:0000221,6.67e-10,44;CL:0000133,6.67e-10,44;CL:0000723,9.53e-09,91;CL:0000048,9.53e-09,91;CL:0000034,1.79e-08,97;CL:0000393,2.05e-08,39;CL:0000211,2.05e-08,39;CL:0000333,4.81e-07,10;CL:0000095,4.81e-07,10;CL:0000243,4.81e-07,10;CL:0000123,4.81e-07,10;CL:0000125,4.81e-07,10;CL:0000030,4.81e-07,10;CL:0000339,4.81e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.13e-14!75;UBERON:0001016!4.13e-14!75;UBERON:0001017!2.03e-13!73;UBERON:0005743!2.03e-13!73;UBERON:0004121!4.55e-11!102;UBERON:0000924!4.55e-11!102;UBERON:0006601!4.55e-11!102;UBERON:0001049!1.36e-10!52;UBERON:0005068!1.36e-10!52;UBERON:0006241!1.36e-10!52;UBERON:0007135!1.36e-10!52;UBERON:0000955!7.96e-10!50;UBERON:0006238!7.96e-10!50;UBERON:0002616!9.30e-10!49;UBERON:0002020!1.31e-09!34;UBERON:0002346!7.19e-08!71;UBERON:0003075!7.19e-08!71;UBERON:0007284!7.19e-08!71;UBERON:0002791!1.45e-07!29;UBERON:0003528!1.45e-07!29;UBERON:0001893!1.45e-07!29;UBERON:0000033!1.88e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.73e-14,75;UBERON:0001017,9.69e-14,73;UBERON:0004121,5.79e-12,95;UBERON:0000924,5.79e-12,95;UBERON:0006601,5.79e-12,95;UBERON:0000073,1.90e-11,54;UBERON:0001049,3.60e-10,52;UBERON:0005068,3.60e-10,52;UBERON:0006241,3.60e-10,52;UBERON:0007135,3.60e-10,52;UBERON:0002020,1.17e-09,34;UBERON:0002346,1.85e-08,64;UBERON:0003075,1.85e-08,64;UBERON:0007284,1.85e-08,64;UBERON:0000955,7.78e-08,47;UBERON:0006238,7.78e-08,47;UBERON:0002616,9.40e-08,46;UBERON:0003528,1.88e-07,29;UBERON:0002791,1.88e-07,29;UBERON:0001893,1.88e-07,29;UBERON:0002021,5.52e-07,10;UBERON:0000411,5.52e-07,10;UBERON:0001950,5.52e-07,10;UBERON:0010371,5.83e-07,73 | |||
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| ||
|short_description=p@chr10:59756164..59756188,+ | |||
}} | }} |
Latest revision as of 12:46, 4 August 2015
Short description: | p@chr10:59756164..59756188, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:59756164..59756188, + |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.30e-10 | 70 |
neural cell | 1.67e-10 | 43 |
ectodermal cell | 6.67e-10 | 44 |
neurectodermal cell | 6.67e-10 | 44 |
somatic stem cell | 9.53e-09 | 91 |
multi fate stem cell | 9.53e-09 | 91 |
stem cell | 1.79e-08 | 97 |
electrically responsive cell | 2.05e-08 | 39 |
electrically active cell | 2.05e-08 | 39 |
migratory neural crest cell | 4.81e-07 | 10 |
neuron associated cell | 4.81e-07 | 10 |
glial cell (sensu Vertebrata) | 4.81e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.81e-07 | 10 |
glial cell | 4.81e-07 | 10 |
glioblast | 4.81e-07 | 10 |
glioblast (sensu Vertebrata) | 4.81e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.73e-14 | 75 |
central nervous system | 9.69e-14 | 73 |
ectoderm-derived structure | 5.79e-12 | 95 |
ectoderm | 5.79e-12 | 95 |
presumptive ectoderm | 5.79e-12 | 95 |
regional part of nervous system | 1.90e-11 | 54 |
neural tube | 3.60e-10 | 52 |
neural rod | 3.60e-10 | 52 |
future spinal cord | 3.60e-10 | 52 |
neural keel | 3.60e-10 | 52 |
gray matter | 1.17e-09 | 34 |
neurectoderm | 1.85e-08 | 64 |
neural plate | 1.85e-08 | 64 |
presumptive neural plate | 1.85e-08 | 64 |
brain | 7.78e-08 | 47 |
future brain | 7.78e-08 | 47 |
regional part of brain | 9.40e-08 | 46 |
brain grey matter | 1.88e-07 | 29 |
regional part of telencephalon | 1.88e-07 | 29 |
telencephalon | 1.88e-07 | 29 |
occipital lobe | 5.52e-07 | 10 |
visual cortex | 5.52e-07 | 10 |
neocortex | 5.52e-07 | 10 |
ecto-epithelium | 5.83e-07 | 73 |