FFCP PHASE1:Hg19::chr8:11706577..11706604,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:11706577..11706604,+ | |||
|coexpression_cluster_id=C632 | |||
|description=CAGE_peak_at_chr8:11706577..11706604,+ | |||
|id=chr8:11706577..11706604,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.19e-10!65;CL:0002194!1.70e-10!63;CL:0000576!1.70e-10!63;CL:0000040!1.70e-10!63;CL:0000559!1.70e-10!63;CL:0000557!1.27e-08!71;CL:0000839!3.71e-08!70;CL:0000766!5.20e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000235;6.19e-34;6!CL:0000840;9.15e-09;5!CL:0002619;4.71e-08;3!CL:0000214;4.71e-08;3!CL:0002591;3.83e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.93e-34,6;CL:0002194,4.93e-11,59;CL:0000576,4.93e-11,59;CL:0000040,4.93e-11,59;CL:0000559,4.93e-11,59;CL:0002009,1.33e-10,61;CL:0000839,1.24e-09,66;CL:0000557,1.86e-09,67;CL:0000840,6.05e-09,5;CL:0001029,6.05e-09,5;CL:0000766,1.20e-08,72;CL:0002619,4.08e-08,3;CL:0000214,6.28e-08,3;CL:0002591,3.73e-07,1;CL:0000511,8.75e-07,1;CL:0002625,8.75e-07,1;CL:0000216,8.75e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.50e-09!167;UBERON:0002371!1.14e-08!80;UBERON:0004765!3.04e-08!101;UBERON:0001434!3.04e-08!101;UBERON:0001474!3.74e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;4.71e-08;3!UBERON:0007616;4.71e-08;3!UBERON:0002217;4.71e-08;3!UBERON:0002018;4.71e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,1.56e-10,100;UBERON:0002371,4.45e-08,76;UBERON:0006915,6.28e-08,3;UBERON:0007616,6.28e-08,3;UBERON:0002217,6.28e-08,3;UBERON:0002018,6.28e-08,3;UBERON:0002204,9.72e-08,167;UBERON:0004765,1.01e-07,90;UBERON:0001474,2.50e-07,82;UBERON:0001136,8.75e-07,1;UBERON:0001343,8.75e-07,1;UBERON:0004910,8.75e-07,1;UBERON:0005154,8.75e-07,1;UBERON:0005295,8.75e-07,1;UBERON:0004813,8.75e-07,1;UBERON:0005297,8.75e-07,1;UBERON:0005294,8.75e-07,1;UBERON:0010141,8.75e-07,1;UBERON:0005891,8.75e-07,1 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0.527533956456907,0,0.331397375727916,2.01697543935533,0,0,0,0,0.408001382488506,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0,0,0,0,0,0,0,1.11957737119962,1.94336199611388,0.77272670290256,0.436194716338694,0.755751887377619,0,0.697287110717054,0.411167888021826,0.309706370895104,0.863077176966451,0,0,0.344745680736619,0.645484683583826,0,0.564727018627814,0.545812300115692,0.224723484445085,0.918251677112708,0,1.91801137739712,0.329851300186716,0.598390972864896,0.426224750532694,0,0.56738522469114,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,0.196468613246569,0,0,1.62273696827342,1.74129737299267,3.45690697349049,0.238490624305342,0,0,0,0,0.347140501607594,2.26123176769604,1.67799774483962,0.275118041940067,0,0,0,0,0.402829317109147,0,0.732186172644509,0,0,0,0,0.225222960966644,0,0,0.916008719652036,0,0,0,0.496971951695318,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0.490385709340376,0,0.576175924479999,0,1.24864030732128,0.570471821544449,0.597794722207204,0,0.485618833104395,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0,0,0,0,1.20190447125277,0.113432183160021,0.358779271377724,0,0,1.20036438433761,0,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0.252433774244115,0.184099797284599,0,0,0,0,0.57978255948989,0.818238361772504,0.286804595389004,0.121973706129595,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0.171567810298526,0.768251997860379,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0.858486162094873,4.43190610957315,1.40402559083543,7.8774516013026,1.87467667973554,0,0,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.602878754119172,0,0.199945982364114,9.72990245129524,10.5473989200747,2.10833939483032,0,0,0,0.289562613335158,0.61642896765115,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.542530047399471,0.415941723061614,0,0,0,0,6.82222512167955,1.03473071292505,0,0.737476674166813,0,0,0.343143423810856,0,0,0.106727557803444,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.280660094433074,0.256278298511402,0.511707249066704,0.482561763430822,0,0.154209693802656,0.532685175939381,0,0.519254429183621,1.04589340613963,0,2.20557117333613,0.0920809889358963,0,0.364182336013434,0.655622074797121,0,0,0,0,0.105551628892876,0,0.340187410553031,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0.650060246036521,1.6068392984416,0.193341436584244,0.308097234229289,0.767518373630648,0,0.107420244868274,0.290033387828457,0,0.0890320356467374,0.165284915360978,0,0,0.2023155617111,0,0.31481234683064,0,0.308033580176089,0,0,0.55597265731176,0,0,0.316379424718726,0.190630193923825,0,0,0.636406495851874,0,0,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0.487426979262569,0,0.272999822815972,0.282810863907425,4.52032466480971,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,1.05553817648832,1.31717957183961,0,0,0,0.670302275535787,3.26672954583968,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,1.24415835064723,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0.627921025580099,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.265372693510018,0,0,0,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0.77380195455795,0,0.335434687599266,0.157611414598396,0.0524545881349981,0,0,0,0,0.662091970365432,0,2.71499800876856,0,0.979762080328227,0,0,0.340776043570843,0.226624183040251,0.146552233678082,0,0,0.13223260174269,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0.149254802886874,0.233713309847224,1.109611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| |||
|short_description=p@chr8:11706577..11706604,+ | |||
}} |
Latest revision as of 14:15, 31 July 2015
Short description: | p@chr8:11706577..11706604, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:11706577..11706604, + |
Coexpression cluster: | C632_Monocytederived_Macrophage_Dendritic_CD14_Keratinocyte_basal_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.93e-34 | 6 |
monopoietic cell | 4.93e-11 | 59 |
monocyte | 4.93e-11 | 59 |
monoblast | 4.93e-11 | 59 |
promonocyte | 4.93e-11 | 59 |
macrophage dendritic cell progenitor | 1.33e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.24e-09 | 66 |
granulocyte monocyte progenitor cell | 1.86e-09 | 67 |
immature conventional dendritic cell | 6.05e-09 | 5 |
common dendritic progenitor | 6.05e-09 | 5 |
myeloid leukocyte | 1.20e-08 | 72 |
adult endothelial progenitor cell | 4.08e-08 | 3 |
synovial cell | 6.28e-08 | 3 |
smooth muscle cell of the pulmonary artery | 3.73e-07 | 1 |
androgen binding protein secreting cell | 8.75e-07 | 1 |
seminiferous tubule epithelial cell | 8.75e-07 | 1 |
Sertoli cell | 8.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 1.56e-10 | 100 |
bone marrow | 4.45e-08 | 76 |
stratified squamous epithelium | 6.28e-08 | 3 |
layer of synovial tissue | 6.28e-08 | 3 |
synovial joint | 6.28e-08 | 3 |
synovial membrane of synovial joint | 6.28e-08 | 3 |
musculoskeletal system | 9.72e-08 | 167 |
skeletal element | 1.01e-07 | 90 |
bone element | 2.50e-07 | 82 |
mesothelium | 8.75e-07 | 1 |
seminiferous tubule of testis | 8.75e-07 | 1 |
epithelium of male gonad | 8.75e-07 | 1 |
epithelial cord | 8.75e-07 | 1 |
sex cord | 8.75e-07 | 1 |
seminiferous tubule epithelium | 8.75e-07 | 1 |
testis sex cord | 8.75e-07 | 1 |
genital ridge | 8.75e-07 | 1 |
primitive sex cord of indifferent gonad | 8.75e-07 | 1 |
coelomic epithelium | 8.75e-07 | 1 |