FFCP PHASE1:Hg19::chr8:11705214..11705244,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:11705214..11705244,+ | |||
|coexpression_cluster_id=C632 | |||
|description=CAGE_peak_at_chr8:11705214..11705244,+ | |||
|id=chr8:11705214..11705244,+ | |||
|ontology_enrichment_celltype=CL:0002371!9.40e-14!591;CL:0000144!2.59e-12!625;CL:0000548!6.08e-09!679;CL:0000004!6.08e-09!679;CL:0000255!6.08e-09!679;CL:0000012!1.99e-08!682;CL:0002194!5.55e-08!63;CL:0000576!5.55e-08!63;CL:0000040!5.55e-08!63;CL:0000559!5.55e-08!63;CL:0000055!7.75e-08!180;CL:0002009!3.15e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.88e-12;6!CL:0000473;1.67e-08;39!CL:0000234;1.67e-08;39!CL:0000134;4.02e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.85e-12,6;CL:0002194,1.43e-11,59;CL:0000576,1.43e-11,59;CL:0000040,1.43e-11,59;CL:0000559,1.43e-11,59;CL:0002009,5.79e-11,61;CL:0000723,2.60e-10,433;CL:0000048,3.30e-10,427;CL:0000034,1.05e-09,441;CL:0000839,1.29e-09,66;CL:0000557,2.25e-09,67;CL:0000766,2.89e-08,72;CL:0002320,4.43e-08,361;CL:0000473,2.87e-07,48;CL:0000234,2.87e-07,48;CL:0000134,2.95e-07,354;CL:0000135,9.91e-07,3;CL:0000388,9.91e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.84e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.29e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.05e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.01e-10!167;UBERON:0000467!1.99e-07!625;UBERON:0000486!2.22e-07!82;UBERON:0000480!2.82e-07!626;UBERON:0003081!5.08e-07!216;UBERON:0000468!5.98e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.94e-17,167;UBERON:0001434,5.95e-13,100;UBERON:0004765,1.95e-12,90;UBERON:0002371,3.60e-11,76;UBERON:0001474,1.27e-10,82;UBERON:0000926,2.77e-09,315;UBERON:0004120,2.77e-09,315;UBERON:0006603,2.77e-09,315;UBERON:0002405,1.01e-07,93;UBERON:0002384,2.24e-07,371;UBERON:0002390,5.87e-07,98;UBERON:0003061,5.87e-07,98;UBERON:0007846,9.91e-07,3;UBERON:0000043,9.91e-07,3;UBERON:0007845,9.91e-07,3 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,2.00146596706261,3.5756887554183,4.36169262050184,0,0.631719873426831,0.522371256399677,0.737201809504527,0.697801167972428,0.873765488520689,0.263766978228454,0.866364470720326,1.32558950291166,2.01697543935533,3.01347264011988,1.46062018077475,1.46379839637152,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0.464448369948228,0,0.30120591877825,0,0,0,0,0.553995408531877,0,0.434021741431704,5.37397138175818,2.91504299417082,1.54545340580512,1.01778767145695,1.51150377475524,0.485168122375632,0.929716147622738,0.822335776043652,0.309706370895104,2.01384674625505,0.512321413058201,0.47296445977717,1.37898272294647,0,1.35426486594342,1.31769637679823,1.63743690034707,0.674170453335254,2.75475503133812,0,0,1.31940520074686,0.199463657621632,0.426224750532694,1.16083695451434,1.13477044938228,0,1.00499466102697,1.0429658368404,0.868755378820466,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0,0.150176892841506,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0.328875809207352,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.383587685530591,1.80719576192283,0,0.579386075843295,0,0,0.378139268656271,0.665188192387692,0.175669571386252,0.0654895377488563,0,0,7.46459005405772,5.57215159357655,9.70593111787716,0.953962497221368,0,0,0,1.72046919021225,0,0.56530794192401,0,0.825354125820202,0.208994966536811,0.258416759169329,0.71153252537342,0.66944122552934,2.01414658554573,0,0.24406205754817,0.735326160691737,7.29127753093584,0,0.673588117878509,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0.436094052142534,0.993943903390637,0.379891534993739,0.397227542439656,0.860509862246441,0,0,0,0.24666754841716,0,0.808264032418128,1.79808093424805,0,0.576175924479999,0,3.43376084513353,0.570471821544449,3.73621701379503,0.352303495931295,0.161872944368132,0.98315564691574,0.408308342509787,0.61417158655884,0.413303124703062,0,0.741800787835671,0,0,0.336672227908132,0,0,0,0.612975591598039,1.35214253015937,0.794025282120147,0.89694817844431,1.49490172172997,0.635795703478686,1.50045548042201,0.309157587715317,0.772921620136887,0.558350568994769,0.675105328965065,0.487185025805993,0.252433774244115,0.368199594569197,0,2.4850671476163,0.403008392910561,0.508681776931463,0.966304265816484,1.09098448236334,0.860413786167011,0.121973706129595,0,0,0,0.252320850875628,0,0,1.92972281457866,0,1.39310378409594,2.88751792667834,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.857839051492628,3.29250856225877,0,0.100528972411631,0,0,2.07986957055916,2.88662684050547,0.695582429850461,0,0.288732895522148,0.462985512576611,0.761016608938393,0,0,10.8335482678455,5.6161023633417,17.8357394746474,1.87467667973554,0.503946384596579,0,0.268675568108545,0,0,0,0,0,0,0,0.380987365753014,0,2.34434894420094,1.71072446022705,0.925447434329912,0,1.14330573052231,0,0,0.22001485746285,0.646358578788889,0,2.535908257668,1.06375246633948,0,0,2.83698264046557,0,0.285955987316295,0,0,3.25736184293735,1.06617584622764,0,2.1100756394171,0,0.299918973546171,24.3247561282381,12.5564272858032,6.32501818449095,0.718874566474748,0,0,1.30303176000821,1.02738161275192,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,1.50051156317903,2.17012018959788,1.87173775377726,2.14114786556594,0.946214490203608,1.05427273493442,0,2.27407504055985,1.03473071292505,0.664225598535437,0.921845842708516,0.868836144680828,0.195801157462741,0.343143423810856,0.206768026122887,0,0.106727557803444,0.909382714338778,0,0.604780586659361,0,0.153461973288062,1.12264037773229,0.512556597022804,0,0.321707842287215,2.96836132889982,0.925258162815933,0.887808626565635,0.739144404124282,0,2.20799719073923,0.241718899183244,2.6065841139427,0.0920809889358963,0.34444334449382,1.45672934405374,2.09799063935079,0,0.385076685522074,0.784349769176855,1.46139224653261,0.422206515571503,0,0.510281115829547,0,0,0.541892875087706,1.50506932156456,0.254876273045038,0.831076008928724,0.223874754722178,0.219259876645935,0.261435451024901,0.512900250232778,0,0.325378394664303,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,0.386682873168488,0.770243085573222,0.767518373630648,0,0,0.435050081742686,0.511359764496605,0.178064071293475,1.32227932288782,0.960950336825531,0.127612712494584,0.30347334256665,0.464845549297286,2.20368642781448,0,1.54016790088044,0.532306030317022,0,0.55597265731176,0.143124886741991,0.744316738719335,0.632758849437452,1.14378116354295,0,0.855877976067841,0.636406495851874,0,0.719489830333259,1.37268514868027,0.589062011728432,0,0,1.26377536871694,0.975267478179181,2.19342140668156,1.05650146756755,1.22849920267187,0.848432591722276,1.13008116620243,0,0.66343897524122,0,0,1.9676842561399,0,0.6196469961995,1.69017361519345,0.430234056612155,0.392996164052485,0.3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| |||
|short_description=p@chr8:11705214..11705244,+ | |||
}} |
Latest revision as of 14:14, 31 July 2015
Short description: | p@chr8:11705214..11705244, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:11705214..11705244, + |
Coexpression cluster: | C632_Monocytederived_Macrophage_Dendritic_CD14_Keratinocyte_basal_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.85e-12 | 6 |
monopoietic cell | 1.43e-11 | 59 |
monocyte | 1.43e-11 | 59 |
monoblast | 1.43e-11 | 59 |
promonocyte | 1.43e-11 | 59 |
macrophage dendritic cell progenitor | 5.79e-11 | 61 |
somatic stem cell | 2.60e-10 | 433 |
multi fate stem cell | 3.30e-10 | 427 |
stem cell | 1.05e-09 | 441 |
myeloid lineage restricted progenitor cell | 1.29e-09 | 66 |
granulocyte monocyte progenitor cell | 2.25e-09 | 67 |
myeloid leukocyte | 2.89e-08 | 72 |
connective tissue cell | 4.43e-08 | 361 |
defensive cell | 2.87e-07 | 48 |
phagocyte | 2.87e-07 | 48 |
mesenchymal cell | 2.95e-07 | 354 |
fibrocyte | 9.91e-07 | 3 |
tendon cell | 9.91e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.94e-17 | 167 |
skeletal system | 5.95e-13 | 100 |
skeletal element | 1.95e-12 | 90 |
bone marrow | 3.60e-11 | 76 |
bone element | 1.27e-10 | 82 |
mesoderm | 2.77e-09 | 315 |
mesoderm-derived structure | 2.77e-09 | 315 |
presumptive mesoderm | 2.77e-09 | 315 |
immune system | 1.01e-07 | 93 |
connective tissue | 2.24e-07 | 371 |
hematopoietic system | 5.87e-07 | 98 |
blood island | 5.87e-07 | 98 |
dense regular connective tissue | 9.91e-07 | 3 |
tendon | 9.91e-07 | 3 |
regular connective tissue | 9.91e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.05e-08 | 14 |