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FFCP PHASE1:Mm9::chr3:87710452..87710529,+: Difference between revisions

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{{FFCP|EntrezGene=15191|HGNC=|MCL_coexpression_id=60|UniProt=P51859|association_with_transcript=209bp_to_ENSMUST00000005017,NM_008231,uc008ptc.2_5end|description=CAGE_peak_2_at_Hdgf_5end|id=chr3:87710452..87710529,+|ontology_enrichment_celltype=CL:0002319!6.00e-07!43;CL:0000221!8.22e-07!44;CL:0000133!8.22e-07!44|ontology_enrichment_celltype_v019_2=CL:0002319,6.00e-07,43;CL:0000221,8.22e-07,44;CL:0000133,8.22e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.03e-16!75;UBERON:0001016!2.03e-16!75;UBERON:0001017!1.12e-15!73;UBERON:0005743!1.12e-15!73;UBERON:0004121!9.42e-12!102;UBERON:0000924!9.42e-12!102;UBERON:0006601!9.42e-12!102;UBERON:0001049!1.43e-11!52;UBERON:0005068!1.43e-11!52;UBERON:0006241!1.43e-11!52;UBERON:0007135!1.43e-11!52;UBERON:0000955!2.31e-11!50;UBERON:0006238!2.31e-11!50;UBERON:0002616!3.36e-11!49;UBERON:0000033!5.39e-10!63;UBERON:0002346!2.21e-08!71;UBERON:0003075!2.21e-08!71;UBERON:0007284!2.21e-08!71;UBERON:0002020!2.31e-07!34;UBERON:0003080!3.03e-07!40;UBERON:0002021!3.64e-07!10;UBERON:0000411!3.64e-07!10;UBERON:0001950!3.64e-07!10;UBERON:0002780!8.98e-07!39;UBERON:0001890!8.98e-07!39;UBERON:0006240!8.98e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.03e-16,75;UBERON:0001017,1.12e-15,73;UBERON:0004121,2.77e-13,95;UBERON:0000924,2.77e-13,95;UBERON:0006601,2.77e-13,95;UBERON:0000073,1.77e-12,54;UBERON:0001049,1.43e-11,52;UBERON:0005068,1.43e-11,52;UBERON:0006241,1.43e-11,52;UBERON:0007135,1.43e-11,52;UBERON:0000955,5.10e-10,47;UBERON:0006238,5.10e-10,47;UBERON:0002346,5.55e-10,64;UBERON:0003075,5.55e-10,64;UBERON:0007284,5.55e-10,64;UBERON:0002616,7.36e-10,46;UBERON:0010371,5.05e-08,73;UBERON:0002020,2.31e-07,34;UBERON:0003080,3.03e-07,40;UBERON:0002021,3.64e-07,10;UBERON:0000411,3.64e-07,10;UBERON:0001950,3.64e-07,10;UBERON:0002780,8.98e-07,39;UBERON:0001890,8.98e-07,39;UBERON:0006240,8.98e-07,39|phase1_expression=18.0968197228417,7.32848356042658,4.54999239389536,9.67885476181856,9.01612313903425,13.0945832091274,10.2789561862031,11.1046058159756,18.4433226018683,16.3845168425395,21.5734639964136,22.4957488366849,9.58724087614752,11.1023911072127,16.6554880907831,17.412872995525,20.2872944657163,10.2525203741427,11.1062691220648,10.6097412949508,58.4247403337849,15.6879702897399,17.5003858723087,16.1592347021341,13.535147582963,7.46501553349526,7.32295393470427,8.18790684206378,20.5225293012884,8.31699428207772,8.86922042621219,7.62036808151557,6.1506478758457,15.8481681015439,26.285497397366,25.2676660944908,23.0711372576477,10.0447591376858,12.5013655123808,12.0410461113974,7.64700934440319,8.87959130445979,11.6522484727477,13.2191658874356,14.4969011643906,13.5824596599644,41.4667412504461,37.7183520538172,49.8687634807251,36.5528210259653,23.6577052546863,31.6255641602937,18.7916518784665,16.6833292662609,18.821252751978,24.182386987379,20.3438742356517,19.0798674142654,29.9428362072205,21.6886301501533,26.6209189472595,28.8017852258762,31.1253178638899,29.6966906702862,41.5323872278129,29.8401648277362,29.3608108308037,45.721978333265,13.0648911508682,15.9307007231395,15.7743721013537,27.4224945027651,27.6085676189517,14.9438775042244,12.6516021744072,14.7075005857603,31.9336054898227,35.7524546638526,36.7119614482422,28.8830970129125,29.3675335963735,26.5665818983948,36.5729728691809,26.449842671489,34.8380004931127,23.5702868378934,21.6404954814636,28.3327157654457,25.6711795399494,29.8507662421803,14.7830889237856,19.7897491705719,18.3592260101093,26.9851595818909,15.5946340187441,17.0250217096988,25.8417733042423,27.6097122576454,21.5622383820381,25.0871097902342,18.8730182500752,11.5493829672886,20.3844191765317,42.6640021891999,23.8140145112336,24.3225470856095,30.331466700887,23.8644308612835,9.58070169494535,21.2272258862699,17.1750473498474,14.9188084372949,17.2961622942044,14.6200961336044,12.4644029563847,26.7669839532209,18.7868175478124,24.581890676385,14.153768831198,23.7797269422691,22.9675179198809,19.8798853785441,16.775258509631,27.5213949190854,34.1398132105932,14.3055950916811,20.7280165395242,8.39863823390771,14.1047952051102,43.7388667062082,26.5350349634803,19.0994615211554,37.1984045211472,38.1016031422192,34.0772393077679,39.7491094516006,17.2108524907035,15.3020573850414,18.4487613656583,23.7799297151716,17.566259799965,15.1735388926092,19.4467100189777,15.5225962370787,19.6625482547337,16.9110110776002,19.1151518101847,25.8703370739016,17.2454394346274,13.8047438522508,15.1317966780996,17.3164628617784,12.2340789659263,22.2881386574187,17.4914815946752,12.7381930763836,18.9597560574573,14.6688307055388,16.4814829649444,15.9486844852336,15.7132460187334,19.9868888221726,14.9149183418682,11.4123254413494,12.9584374825398,12.7893669612724,19.047411499373,16.9309746432396,22.0510198884064,16.2525789438304,23.1046107205689,19.4445983275692,22.3941117596872,17.8494536951294,35.3287113587734,17.5966887168576,14.8688452342709,13.2225283331772,16.6364835417482,17.4177503895329,16.88163743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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15191
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=P51859
|association_with_transcript=209bp_to_ENSMUST00000005017,NM_008231,uc008ptc.2_5end
|cluster_id=chr3:87710452..87710529,+
|description=CAGE_peak_2_at_Hdgf_5end
|id=chr3:87710452..87710529,+
|ontology_enrichment_celltype=CL:0002319!6.00e-07!43;CL:0000221!8.22e-07!44;CL:0000133!8.22e-07!44
|ontology_enrichment_celltype_v019_2=CL:0002319,6.00e-07,43;CL:0000221,8.22e-07,44;CL:0000133,8.22e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.03e-16!75;UBERON:0001016!2.03e-16!75;UBERON:0001017!1.12e-15!73;UBERON:0005743!1.12e-15!73;UBERON:0004121!9.42e-12!102;UBERON:0000924!9.42e-12!102;UBERON:0006601!9.42e-12!102;UBERON:0001049!1.43e-11!52;UBERON:0005068!1.43e-11!52;UBERON:0006241!1.43e-11!52;UBERON:0007135!1.43e-11!52;UBERON:0000955!2.31e-11!50;UBERON:0006238!2.31e-11!50;UBERON:0002616!3.36e-11!49;UBERON:0000033!5.39e-10!63;UBERON:0002346!2.21e-08!71;UBERON:0003075!2.21e-08!71;UBERON:0007284!2.21e-08!71;UBERON:0002020!2.31e-07!34;UBERON:0003080!3.03e-07!40;UBERON:0002021!3.64e-07!10;UBERON:0000411!3.64e-07!10;UBERON:0001950!3.64e-07!10;UBERON:0002780!8.98e-07!39;UBERON:0001890!8.98e-07!39;UBERON:0006240!8.98e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.03e-16,75;UBERON:0001017,1.12e-15,73;UBERON:0004121,2.77e-13,95;UBERON:0000924,2.77e-13,95;UBERON:0006601,2.77e-13,95;UBERON:0000073,1.77e-12,54;UBERON:0001049,1.43e-11,52;UBERON:0005068,1.43e-11,52;UBERON:0006241,1.43e-11,52;UBERON:0007135,1.43e-11,52;UBERON:0000955,5.10e-10,47;UBERON:0006238,5.10e-10,47;UBERON:0002346,5.55e-10,64;UBERON:0003075,5.55e-10,64;UBERON:0007284,5.55e-10,64;UBERON:0002616,7.36e-10,46;UBERON:0010371,5.05e-08,73;UBERON:0002020,2.31e-07,34;UBERON:0003080,3.03e-07,40;UBERON:0002021,3.64e-07,10;UBERON:0000411,3.64e-07,10;UBERON:0001950,3.64e-07,10;UBERON:0002780,8.98e-07,39;UBERON:0001890,8.98e-07,39;UBERON:0006240,8.98e-07,39
|phase1_expression=18.0968197228417,7.32848356042658,4.54999239389536,9.67885476181856,9.01612313903425,13.0945832091274,10.2789561862031,11.1046058159756,18.4433226018683,16.3845168425395,21.5734639964136,22.4957488366849,9.58724087614752,11.1023911072127,16.6554880907831,17.412872995525,20.2872944657163,10.2525203741427,11.1062691220648,10.6097412949508,58.4247403337849,15.6879702897399,17.5003858723087,16.1592347021341,13.535147582963,7.46501553349526,7.32295393470427,8.18790684206378,20.5225293012884,8.31699428207772,8.86922042621219,7.62036808151557,6.1506478758457,15.8481681015439,26.285497397366,25.2676660944908,23.0711372576477,10.0447591376858,12.5013655123808,12.0410461113974,7.64700934440319,8.87959130445979,11.6522484727477,13.2191658874356,14.4969011643906,13.5824596599644,41.4667412504461,37.7183520538172,49.8687634807251,36.5528210259653,23.6577052546863,31.6255641602937,18.7916518784665,16.6833292662609,18.821252751978,24.182386987379,20.3438742356517,19.0798674142654,29.9428362072205,21.6886301501533,26.6209189472595,28.8017852258762,31.1253178638899,29.6966906702862,41.5323872278129,29.8401648277362,29.3608108308037,45.721978333265,13.0648911508682,15.9307007231395,15.7743721013537,27.4224945027651,27.6085676189517,14.9438775042244,12.6516021744072,14.7075005857603,31.9336054898227,35.7524546638526,36.7119614482422,28.8830970129125,29.3675335963735,26.5665818983948,36.5729728691809,26.449842671489,34.8380004931127,23.5702868378934,21.6404954814636,28.3327157654457,25.6711795399494,29.8507662421803,14.7830889237856,19.7897491705719,18.3592260101093,26.9851595818909,15.5946340187441,17.0250217096988,25.8417733042423,27.6097122576454,21.5622383820381,25.0871097902342,18.8730182500752,11.5493829672886,20.3844191765317,42.6640021891999,23.8140145112336,24.3225470856095,30.331466700887,23.8644308612835,9.58070169494535,21.2272258862699,17.1750473498474,14.9188084372949,17.2961622942044,14.6200961336044,12.4644029563847,26.7669839532209,18.7868175478124,24.581890676385,14.153768831198,23.7797269422691,22.9675179198809,19.8798853785441,16.775258509631,27.5213949190854,34.1398132105932,14.3055950916811,20.7280165395242,8.39863823390771,14.1047952051102,43.7388667062082,26.5350349634803,19.0994615211554,37.1984045211472,38.1016031422192,34.0772393077679,39.7491094516006,17.2108524907035,15.3020573850414,18.4487613656583,23.7799297151716,17.566259799965,15.1735388926092,19.4467100189777,15.5225962370787,19.6625482547337,16.9110110776002,19.1151518101847,25.8703370739016,17.2454394346274,13.8047438522508,15.1317966780996,17.3164628617784,12.2340789659263,22.2881386574187,17.4914815946752,12.7381930763836,18.9597560574573,14.6688307055388,16.4814829649444,15.9486844852336,15.7132460187334,19.9868888221726,14.9149183418682,11.4123254413494,12.9584374825398,12.7893669612724,19.047411499373,16.9309746432396,22.0510198884064,16.2525789438304,23.1046107205689,19.4445983275692,22.3941117596872,17.8494536951294,35.3287113587734,17.5966887168576,14.8688452342709,13.2225283331772,16.6364835417482,17.4177503895329,16.8816374331942,19.9666689377109,20.0140239460383,21.6857213768317,16.1339880925134,20.2579714310533,16.0854533632172,22.0841683965677,20.8611573217459,19.7740269903929,19.0201483889731,26.2866480695765,18.2081184914958,16.3375373031912,13.5249282807697,14.0519416213267,15.3222464862424,20.2692519483021,25.4210879239514,36.7549268469209,32.0277404796405,38.7467094714454,21.937494404449,20.5219480030796,22.0146074526787,22.9359354632551,23.1260538382893,25.3236017740038,19.3515647353879,19.5633373466551,10.2145192868272,13.1789478330279,17.2521847832825,14.1413560114031,13.4176199439261,25.2578877947112,24.577445652502,23.1572890254416,21.4313700593261,15.5382957651798,13.6890580211302,12.5611363473639,13.3773441524446,18.9282070909252,23.3282768068293,25.5625078693716,17.9704064281058,17.0527811029557,20.8885746941308,16.5501947862895,20.3768278601757,21.2634116114822,25.6345182696763,28.8270012423916,20.6540994667995,16.2802680319792,38.5321415970701,41.2585136804555,27.7050057686581,30.5489821917291,13.8823616543153,27.7211508450613,22.6194567619439,23.8968797952552,20.2746793414979,23.2122755246843,23.074209995469,19.2888866221466,23.7172666767914,23.4564560987919,20.8651925256155,22.0801348547396,15.1484872198826,20.1263550026493,51.7706039525855,16.2663026223838,22.3719432153916,24.5186603682668,38.0939441816197,27.3617281670095,23.0001180919717,27.9920971697679,24.5983191085458,36.028190404683,44.2758156014995,49.5050607591297,27.5756080660568,16.9257428389432,21.60290019172,18.2186479776853,18.6207245324387,22.831208653065,23.2014119048991,19.1812917942198,13.6109590676952,7.20229040936989,35.2845436887939,14.5099902588502,14.2088695492397,15.8019863311768,17.1896175364517,22.4873032650734,19.5292160542,36.3433591940599,21.0171183381359,15.6854019652049,13.7043950253587,15.6345819313894,20.2307457027117,20.3612574153805,17.8477351493548,20.5728634915777,17.9659965945751,38.1868247206045,14.7096237015228,12.8091264289915,18.468913280528,18.3997700492732,18.9975430459175,19.0158728402597,21.0766312099607,27.2226179663391,21.5160855664376,24.853572523477,183.200205072362,8.22341003241883,13.7330547079391,17.3061557626202,17.8240556399269,10.4752797804282,14.2002258761362,17.1869787994014,12.8976993643624,86.7286993765362,129.037442803524,12.9564559457553,24.9352014806902,25.1641845053827,17.9290735709357,15.7543492187384,17.6826405755326,17.7889265289554,12.5536098098391,13.8324036428962,11.812055031525,11.8974898461472,14.8135978724424,13.2772341463655,9.70078288107022,26.9809156502102,8.21348027484039,3.40912655116008,6.54750003819906,18.5462010270903,23.8356743823001,24.9086209003481,25.0811003522507,26.5833215138743,32.7556068717899,46.0325236507177,35.5195218332426,43.8225614976403,39.0497036269266,42.3020582538232,47.2515750162264,34.674732648265,45.7673833074047,51.2582708634302,14.8415907045373,21.1483182902546,12.2928196142977,16.0450433265074,18.4459583112624,20.4066294379516,18.2242316797324,18.9552252659783,17.0087181083662,18.4468964587572,17.4900716924265,21.1261502352405,19.7583580761452,18.0550929781731,17.230640686684,24.2909782554368,22.1339062554674,20.4483773691527,21.0163809409686,17.6638704161277,17.8292011240416,14.9079677173843,17.6442780561018,17.8776092457764,19.0100948438968,18.1921406967104,19.3903651245139,17.0995312434598,19.8274006214958,19.0788372363631,18.6256978454953,23.0500488758818,12.6861623382604,16.2683683245264,17.3615949883027,18.7357933453459,20.3520499347505,16.7599422157673,16.4507965579205,22.0591419119515,19.4768981921154
|short_description=p2@Hdgf
}}

Latest revision as of 19:13, 25 September 2015

Short description:p2@Hdgf
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Hdgf_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 209bp_to_ENSMUST00000005017, NM_008231, uc008ptc.2_5end
EntrezGene:Hdgf
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Hdgf

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.10
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.68
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I713.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E718.44
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E621.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F122.50
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.59
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E811.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A116.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A317.41
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A520.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.25
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A358.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H215.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I917.50
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.54
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I17.32
GP2+ M cell, pool3.CNhs13240.11847-124I28.19
Ileum epithelium, pool1.CNhs13199.10252-104B920.52
Ileum epithelium, pool2.CNhs13232.10253-104C18.32
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I37.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F526.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F625.27
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F723.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H112.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.50
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B741.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C237.72
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B849.87
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C336.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C423.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C431.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A218.79
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I916.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A118.82
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C124.18
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.34
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C519.08
Mouse Granule cells, donor1.CNhs12131.11713-123C329.94
Mouse Granule cells, donor2.CNhs12357.11731-123E321.69
Mouse Granule cells, donor3.CNhs12108.11636-122C726.62
Mouse Meningeal cells, donor1.CNhs12132.11716-123C628.80
Mouse Meningeal cells, donor3.CNhs12109.11639-122D131.13
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C729.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E741.53
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D229.84
Mouse Microglia, donor1.CNhs12629.11718-123C829.36
Mouse Microglia, donor2.CNhs12634.11736-123E845.72
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.06
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.93
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.77
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D527.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D214.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D331.93
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F335.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D736.71
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D428.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F429.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.57
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E436.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E526.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I634.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D623.57
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.64
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E128.33
Mouse Schwann, donor1.CNhs12507.11728-123D925.67
Mouse Schwann, donor2.CNhs12573.11746-123F929.85
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.78
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F719.79
Mouse hepatocyte, donor1.CNhs13078.11714-123C418.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C826.99
Mouse hepatocyte, donor6.CNhs13090.11822-124F415.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F617.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A725.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I727.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E321.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I825.09
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G618.87
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G123.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G224.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G330.33
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.86
accessory axillary lymph node, adult.CNhs10475.1063-29H99.58
adrenal gland, adult.CNhs10508.49-24D721.23
adrenal gland, embryo E14.CNhs11038.406-44C517.18
adrenal gland, embryo E16.CNhs11004.1254-43D614.92
adrenal gland, embryo E17.CNhs11043.1263-45I117.30
adrenal gland, embryo E18.CNhs11026.1262-18F514.62
adrenal gland, neonate N00.CNhs11191.1311-23C112.46
adrenal gland, neonate N25.CNhs11223.1377-27I326.77
amnion, adult pregnant day17.5.CNhs10488.583-22A818.79
aorta, adult.CNhs10498.46-23H124.58
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F523.78
bone (os femoris), neonate N16.CNhs11225.1525-43A622.97
bone (os femoris), neonate N20.CNhs11195.1350-25C319.88
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B227.52
cerebellum, neonate N30.CNhs11135.1395-42I234.14
colon, adult.CNhs10468.36-18H714.31
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C720.73
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.10
corpora quadrigemina, adult.CNhs10501.16-22A443.74
corpus striatum, adult.CNhs10487.19-21D826.54
corpus striatum, neonate N00.CNhs11226.630-43F119.10
cortex, adult.CNhs10473.12-14D537.20
cortex, neonate N30.CNhs11107.1392-42F238.10
diencephalon, adult.CNhs10482.20-12F234.08
diencephalon, neonate N30.CNhs11201.1388-42B239.75
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.21
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.30
epididymis, adult.CNhs10490.58-23B218.45
eyeball, adult.CNhs10484.31-12G423.78
eyeball, embryo E12.CNhs11016.345-16C617.57
eyeball, embryo E14.CNhs10521.399-16E215.17
eyeball, embryo E15.CNhs10593.426-16C919.45
eyeball, embryo E17.CNhs11023.1261-18D415.52
eyeball, neonate N00.CNhs11207.633-15C619.66
eyeball, neonate N01.CNhs11140.1532-43E716.91
eyeball, neonate N02.CNhs11205.1551-44G819.12
eyeball, neonate N16.CNhs11188.777-19A225.87
forelimb, embryo E11.CNhs10596.335-25E217.25
forelimb, embryo E12.CNhs10600.359-14H213.80
forelimb, embryo E13.CNhs10589.384-1E215.13
forelimb, embryo E14.CNhs10577.413-26A817.32
forelimb, embryo E15.CNhs11007.437-20E712.23
forelimb, embryo E17.CNhs10598.1517-43C422.29
forelimb, embryo E18.CNhs11008.1520-43B517.49
gonad, embryo E13.CNhs11044.1564-45I612.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.96
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.67
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D516.48
heart, embryo E11.CNhs10586.331-24E915.95
heart, embryo E12.CNhs11015.353-12F515.71
heart, embryo E13.CNhs11013.376-3I919.99
heart, embryo E14.CNhs10597.403-26D414.91
heart, embryo E15.CNhs11017.431-16C811.41
heart, embryo E16.CNhs11021.457-17C612.96
heart, embryo E17.CNhs11025.479-18E512.79
heart, embryo E18.CNhs11030.1283-20G319.05
heart, neonate N00.CNhs11213.639-21E316.93
heart, neonate N03.CNhs11221.1349-25I222.05
heart, neonate N10.CNhs11118.749-24G116.25
heart, neonate N16.CNhs11209.782-15G123.10
heart, neonate N20.CNhs11127.821-26I619.44
heart, neonate N25.CNhs11196.1351-25D322.39
heart, neonate N30.CNhs11202.1390-42D217.85
hippocampus, adult.CNhs10478.13-16E835.33
hippocampus, neonate N00.CNhs11228.627-43G117.60
intestinal mucosa, adult.CNhs10506.860-29I314.87
intestine, adult.CNhs10496.178-9A313.22
intestine, embryo E12.CNhs11019.1251-16I516.64
intestine, embryo E13.CNhs11010.381-16D517.42
intestine, embryo E15.CNhs10602.976-16D816.88
intestine, embryo E16.CNhs10585.463-22H419.97
intestine, embryo E17.CNhs10582.482-18D320.01
intestine, embryo E18.CNhs10526.1289-20F721.69
intestine, neonate N00.CNhs11126.644-26D116.13
intestine, neonate N01.CNhs11192.1322-23E920.26
intestine, neonate N06.CNhs11102.688-20B816.09
intestine, neonate N07.CNhs11095.720-20F222.08
intestine, neonate N10.CNhs11098.755-23A520.86
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E319.02
intestine, neonate N30.CNhs11131.1384-42G126.29
kidney, embryo E14.CNhs10606.411-4I918.21
kidney, embryo E15.CNhs10997.434-16F816.34
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I214.05
kidney, embryo E18.CNhs11001.1288-20C715.32
kidney, neonate N00.CNhs11214.646-21G720.27
kidney, neonate N10.CNhs11206.758-6D525.42
kidney, neonate N20.CNhs11113.832-19I136.75
kidney, neonate N25.CNhs11122.1353-25F332.03
kidney, neonate N30.CNhs11203.1385-42H138.75
liver, adult pregnant day01.CNhs10466.508-5B221.94
liver, embryo E12.CNhs10601.355-15F820.52
liver, embryo E13.CNhs10524.378-3H622.01
liver, embryo E14.CNhs10594.409-16E122.94
liver, embryo E15.CNhs10520.433-16D723.13
liver, embryo E16.CNhs10523.462-17F525.32
liver, embryo E17.CNhs10510.481-18A319.35
liver, embryo E18.CNhs10579.499-43G419.56
liver, neonate N00.CNhs11117.641-24F410.21
liver, neonate N03.CNhs11123.1345-25G213.18
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H214.14
liver, neonate N10.CNhs11115.751-24B913.42
liver, neonate N20.CNhs11220.823-25A325.26
liver, neonate N25.CNhs11198.1368-26H124.58
liver, neonate N30.CNhs11106.1382-42D123.16
lung, adult.CNhs10474.28-22B121.43
lung, embryo E12.CNhs10522.354-16G215.54
lung, embryo E14.CNhs10604.404-26F813.69
lung, embryo E15.CNhs11020.432-17C512.56
lung, embryo E16.CNhs10998.458-17B613.38
lung, embryo E17.CNhs10605.480-44A618.93
lung, embryo E18.CNhs10583.1287-20I623.33
lung, neonate N00.CNhs11224.640-42C625.56
lung, neonate N06.CNhs11212.683-20E517.97
lung, neonate N07.CNhs11111.715-19A317.05
lung, neonate N10.CNhs11219.750-23E620.89
lung, neonate N20.CNhs11109.822-18A416.55
lung, neonate N25.CNhs11119.1359-25C720.38
lung, neonate N30.CNhs11133.1394-42H221.26
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A125.63
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A128.83
mammary gland, adult lactating day02.CNhs10480.595-22B620.65
mammary gland, adult pregnant day19.CNhs10476.588-5H216.28
medulla oblongata, adult.CNhs10477.17-12C238.53
medulla oblongata, neonate N30.CNhs11200.1396-42A341.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C727.71
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C230.55
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E227.72
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.62
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.90
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.27
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D923.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D623.72
olfactory brain, adult.CNhs10489.18-22I923.46
ovary, adult.CNhs10507.91-2I720.87
ovary, embryo E18.CNhs11040.505-44H722.08
ovary, neonate N00.CNhs11217.1299-22I415.15
oviduct, adult pregnant day01.CNhs10500.988-6G620.13
pancreas, adult.CNhs10486.34-16E451.77
pancreas, embryo E14.CNhs11012.405-44F416.27
pancreas, embryo E15.CNhs11042.1556-45F222.37
pancreas, embryo E16.CNhs11003.460-26E524.52
pancreas, embryo E17.CNhs10599.1558-45G338.09
pancreas, embryo E18.CNhs10580.1535-43I727.36
pancreas, neonate N00.CNhs11105.645-26G923.00
pancreas, neonate N01.CNhs11138.1531-43D727.99
pancreas, neonate N02.CNhs11139.1539-43D824.60
pancreas, neonate N16.CNhs11136.787-43B636.03
pancreas, neonate N25.CNhs11094.1555-45E244.28
pancreas, neonate N30.CNhs11182.1548-44H549.51
pituitary gland, adult.CNhs10493.21-1G827.58
pituitary gland, embryo E12.CNhs11018.346-16E616.93
pituitary gland, embryo E13.CNhs11009.370-44C721.60
pituitary gland, embryo E14.CNhs11037.398-44A518.22
pituitary gland, embryo E15.CNhs10592.427-16B918.62
pituitary gland, embryo E16.CNhs11036.449-43F622.83
pituitary gland, embryo E17.CNhs11039.1265-44F523.20
pituitary gland, neonate N00.CNhs11190.1308-22E919.18
placenta, adult pregnant day10.CNhs10472.539-13I713.61
placenta, adult pregnant day17.CNhs10464.577-18G37.20
prostate, adult.CNhs10470.859-1F835.28
skin, adult.CNhs10492.30-1C314.51
skin, neonate N00.CNhs11124.650-25G414.21
skin, neonate N03.CNhs11215.662-22H315.80
skin, neonate N06.CNhs11097.693-20I517.19
skin, neonate N10.CNhs11108.762-6C422.49
small intestine, neonate N16.CNhs11114.790-21I119.53
spinal cord, adult.CNhs10505.24-13C936.34
spleen, adult.CNhs10465.25-2G221.02
spleen, embryo E16.CNhs11035.461-43C115.69
spleen, embryo E18.CNhs11011.1271-21F213.70
spleen, neonate N10.CNhs11116.752-24D115.63
spleen, neonate N20.CNhs11112.824-19H120.23
spleen, neonate N25.CNhs11099.1354-25G320.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.97
stomach, adult.CNhs10503.33-1H638.19
stomach, embryo E12.CNhs10588.356-43E314.71
stomach, embryo E15.CNhs10603.1252-16G812.81
stomach, embryo E16.CNhs11022.459-17D418.47
stomach, embryo E17.CNhs11006.1035-18D518.40
stomach, embryo E18.CNhs10999.1286-20C619.00
stomach, neonate N03.CNhs11193.1340-24B819.02
stomach, neonate N07.CNhs11210.718-18A921.08
stomach, neonate N25.CNhs11104.1355-25E427.22
stomach, neonate N30.CNhs11134.1386-42I121.52
submandibular gland, adult.CNhs10469.59-29C124.85
testis, adult.CNhs10504.57-7G5183.20
testis, embryo E13.CNhs11031.389-23F58.22
testis, embryo E15.CNhs11034.443-27C513.73
testis, embryo E16.CNhs11033.470-26G517.31
testis, embryo E17.CNhs11029.486-18I517.82
testis, embryo E18.CNhs11027.503-18G510.48
testis, neonate N00.CNhs11189.1300-22B714.20
testis, neonate N07.CNhs11222.726-26I417.19
testis, neonate N10.CNhs11204.763-44D912.90
testis, neonate N20.CNhs11110.839-18H386.73
testis, neonate N30.CNhs11130.1391-42E2129.04
thymus, adult.CNhs10471.38-12B512.96
thymus, embryo E14.CNhs11041.402-44I424.94
thymus, embryo E15.CNhs11005.430-45I225.16
thymus, embryo E16.CNhs11002.456-26C517.93
thymus, embryo E17.CNhs10581.478-18C115.75
thymus, embryo E18.CNhs10595.1273-19G417.68
thymus, neonate N02.CNhs11181.1541-43F817.79
thymus, neonate N03.CNhs11137.2104-43C712.55
thymus, neonate N06.CNhs11197.681-26C413.83
thymus, neonate N07.CNhs11211.713-19D311.81
thymus, neonate N10.CNhs11194.748-24E411.90
thymus, neonate N20.CNhs11186.820-7A214.81
thymus, neonate N25.CNhs11125.1362-25G713.28
thymus, neonate N30.CNhs11132.1393-42G29.70
tongue, adult.CNhs10499.32-1B426.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.41
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.55
urinary bladder, adult.CNhs10481.879-12E418.55
uterus, adult pregnant day19.CNhs10497.590-15F523.84
uterus, adult.CNhs10509.92-27E524.91
vagina, adult.CNhs10502.89-27D525.08
vesicular gland, adult.CNhs10491.51-27F826.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.76
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A246.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A335.52
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D743.82
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.05
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A542.30
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A647.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A734.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A845.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A951.26
whole body, embryo E11.CNhs11014.324-5I814.84
whole body, embryo E12.CNhs10587.857-27C921.15
whole body, embryo E13.CNhs10512.372-23H212.29
whole body, embryo E14.5.CNhs10578.420-27D216.05
whole body, embryo E14.CNhs10519.395-14B118.45
whole body, embryo E16.CNhs10514.453-14F220.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.96
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.49
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G521.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G519.76
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G524.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G522.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.45
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.02
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.66
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.19
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.83
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G523.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.27
whole body, embryo E17.5.CNhs10513.490-9F917.36
whole body, embryo E17.CNhs10517.475-3I518.74
whole body, embryo E18.CNhs10516.493-3B320.35
whole body, neonate N00.CNhs10525.657-19C216.76
whole body, neonate N01.CNhs10576.659-23C616.45
whole body, neonate N06.CNhs10515.692-21D122.06
whole body, neonate N10.CNhs10518.761-6B419.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell6.00e-0743
ectodermal cell8.22e-0744
neurectodermal cell8.22e-0744

Uber anatomy
Ontology termp-valuen
nervous system2.03e-1675
central nervous system1.12e-1573
ectoderm-derived structure2.77e-1395
ectoderm2.77e-1395
presumptive ectoderm2.77e-1395
regional part of nervous system1.77e-1254
neural tube1.43e-1152
neural rod1.43e-1152
future spinal cord1.43e-1152
neural keel1.43e-1152
brain5.10e-1047
future brain5.10e-1047
neurectoderm5.55e-1064
neural plate5.55e-1064
presumptive neural plate5.55e-1064
regional part of brain7.36e-1046
ecto-epithelium5.05e-0873
gray matter2.31e-0734
anterior neural tube3.03e-0740
occipital lobe3.64e-0710
visual cortex3.64e-0710
neocortex3.64e-0710
regional part of forebrain8.98e-0739
forebrain8.98e-0739
future forebrain8.98e-0739
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