FFCP PHASE1:Hg19::chr7:95225729..95225740,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8812 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=31bp_to_ENST00000473301_5end | |||
|cluster_id=chr7:95225729..95225740,- | |||
|coexpression_cluster_id=C538 | |||
|description=CAGE_peak_6_at_PDK4_5end | |||
|id=chr7:95225729..95225740,- | |||
|ontology_enrichment_celltype=CL:0000136!9.16e-09!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.09e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.18e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0003104;5.60e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.16e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.33e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.48e-58!115;UBERON:0001049!9.22e-14!57;UBERON:0005068!9.22e-14!57;UBERON:0006241!9.22e-14!57;UBERON:0007135!9.22e-14!57;UBERON:0002616!8.08e-12!59;UBERON:0003075!3.75e-11!86;UBERON:0007284!3.75e-11!86;UBERON:0000955!1.38e-10!69;UBERON:0006238!1.38e-10!69;UBERON:0002346!3.03e-10!90;UBERON:0003080!3.13e-10!42;UBERON:0001017!4.09e-10!82;UBERON:0005743!5.71e-10!86;UBERON:0002020!1.04e-09!34;UBERON:0003528!1.04e-09!34;UBERON:0001893!1.34e-09!34;UBERON:0002780!2.46e-09!41;UBERON:0001890!2.46e-09!41;UBERON:0006240!2.46e-09!41;UBERON:0000073!4.68e-09!94;UBERON:0001016!4.68e-09!94;UBERON:0002791!5.74e-09!33;UBERON:0002298!1.49e-08!8;UBERON:0000153!1.69e-08!129;UBERON:0007811!1.69e-08!129;UBERON:0000033!4.05e-08!123;UBERON:0000062!4.59e-08!511;UBERON:0001869!5.75e-08!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;1.14e-10;2!UBERON:0007100;6.26e-09;25!UBERON:0007023;2.68e-08;114!UBERON:0006947;7.57e-08;3!UBERON:0004054;7.57e-08;3!UBERON:0004151;1.61e-07;3!UBERON:0003978;2.19e-07;3!UBERON:0000946;2.19e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.12e-27,114;UBERON:0002133,8.96e-11,2;UBERON:0007100,3.28e-08,27;UBERON:0003103,6.61e-08,68;UBERON:0006947,7.46e-08,3;UBERON:0004054,7.46e-08,3;UBERON:0004151,1.39e-07,3;UBERON:0003978,1.87e-07,3;UBERON:0009751,1.87e-07,3;UBERON:0000946,1.87e-07,3;UBERON:0002523,1.87e-07,3;UBERON:0005983,1.87e-07,3;UBERON:0002165,1.87e-07,3;UBERON:0002062,1.87e-07,3;UBERON:0007280,1.87e-07,3 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,0,0.893922188854576,0,0,1.26343974685366,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419317291016752,0,0,0,0,0.39783335439818,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,6.59286806723523,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,1.38100767891707,0,0,0.969332746095218,0.278304294485554,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12298154808014,1.22206028986725,0,0,0,0.404406797884062,0,0,0,0,0,6.70793484843964,0,0,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0.580537987734511,0.730893170861856,0.164230914106418,0.484945082442097,0,0.451961481561065,0,0,0.253243183823515,0,0,0.640358984218058,0,0,0.114536596165916,0.514784993585894,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,3.90995361781156,0.229160424011684,1.43574604915363,3.79390100948083,8.58452096273142,8.03417246790741,2.14987111957524,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.0607495566580247,0,1.10327990218877,0.104909176269996,0,0.179287339332845,0,0.714695326373367,14.5660233480395,0,0,0,0,0,0,0,0,1.02586563574658,0,0.129282956361551,0.66116300871345,0,0,0.961086713109252,0.943225830597996,0,0.496166021811951,0,0,0,1.08803560673895,1.5041393641362,2.14441903734423,4.59021682993726,0.157054096250234,0,0.488105059607853,0.250381861413,1.14681839138014,0.776503360757966,0.124192805882767,0,0,0,1.42732666772484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.0691572524642179,0.161475645631851,4.28308260777463,0,0,0,0,0,0,0,1.27857558193737,0,3.90757005616546,0,0,0,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,1.21393120847326,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,1.64835494986079,0.314231179832004,0,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0.414432328326074,1.7071847709395,0,0,0,0,12.7016115057279,0,0,0,0,0,0,19.4228651156368,25.768364520918,0,0.485710993059139,0,0.198950775161368,0,0,0,0,3.93588206350518,0,0.470317296361523,0.980593287015622,0,1.17785080268967,0,0,0,0.751871343838829,0.322289439867886,0,0,0,0.0802413666891683,0,0,1.00337708206016,0,0.135982980381829,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,1.66713136080127,0.267964130156178,0,0.413731983447581,0,0.476128862927481,0,0.496597714366863,0,0.827413057616144,0,1.52401723527873,0.342233301085281,0,0.860666464712116,0.665320713092027,0,0,0,0,2.34640942403454,0,0.406896178315738,2.66302709674205,0.805095174364105,0 | |||
|short_description=p6@PDK4 | |||
}} |
Latest revision as of 05:06, 20 September 2015
Short description: | p6@PDK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PDK4_5end |
Coexpression cluster: | C538_left_skeletal_heart_seminal_ductus_adipose_mature |
Association with transcript: | 31bp_to_ENST00000473301_5end |
EntrezGene: | PDK4 |
HGNC: | 8812 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.18e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.12e-27 | 114 |
atrioventricular valve | 8.96e-11 | 2 |
primary circulatory organ | 3.28e-08 | 27 |
compound organ | 6.61e-08 | 68 |
male genital duct | 7.46e-08 | 3 |
internal male genitalia | 7.46e-08 | 3 |
cardiac chamber | 1.39e-07 | 3 |
valve | 1.87e-07 | 3 |
cardiac mesenchyme | 1.87e-07 | 3 |
cardial valve | 1.87e-07 | 3 |
tunica intima | 1.87e-07 | 3 |
heart layer | 1.87e-07 | 3 |
endocardium | 1.87e-07 | 3 |
endocardial cushion | 1.87e-07 | 3 |
presumptive endocardium | 1.87e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.33e-11 | 2 |