FFCP PHASE1:Mm9::chr3:69120795..69120859,+: Difference between revisions
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{{FFCP|EntrezGene=242083|HGNC=|MCL_coexpression_id=1|UniProt=Q8BHN0|association_with_transcript=0bp_to_NM_178726,uc008pmg.1_5end|description=CAGE_peak_1_at_Ppm1l_5end|id=chr3:69120795..69120859,+|ontology_enrichment_celltype=CL:0000540!6.41e-14!33;CL:0000047!6.41e-14!33;CL:0000031!6.41e-14!33;CL:0000404!6.41e-14!33;CL:0000117!3.84e-13!23;CL:0000337!3.84e-13!23;CL:0000221!1.84e-11!44;CL:0000133!1.84e-11!44;CL:0002319!4.31e-11!43;CL:0000393!2.88e-10!39;CL:0000211!2.88e-10!39;CL:0000055!6.92e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,6.40e-14,33;CL:0000047,6.40e-14,33;CL:0000031,6.40e-14,33;CL:0000404,6.40e-14,33;CL:0000117,3.84e-13,23;CL:0000337,3.84e-13,23;CL:0000221,1.83e-11,44;CL:0000133,1.83e-11,44;CL:0002319,4.30e-11,43;CL:0000393,2.94e-10,39;CL:0000211,2.94e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.92e-27!75;UBERON:0001016!1.92e-27!75;UBERON:0001017!1.48e-26!73;UBERON:0005743!1.48e-26!73;UBERON:0001049!3.43e-23!52;UBERON:0005068!3.43e-23!52;UBERON:0006241!3.43e-23!52;UBERON:0007135!3.43e-23!52;UBERON:0000033!1.43e-22!63;UBERON:0000955!1.47e-22!50;UBERON:0006238!1.47e-22!50;UBERON:0002616!6.90e-22!49;UBERON:0004121!9.62e-21!102;UBERON:0000924!9.62e-21!102;UBERON:0006601!9.62e-21!102;UBERON:0002346!1.74e-19!71;UBERON:0003075!1.74e-19!71;UBERON:0007284!1.74e-19!71;UBERON:0003080!1.83e-18!40;UBERON:0002780!5.64e-18!39;UBERON:0001890!5.64e-18!39;UBERON:0006240!5.64e-18!39;UBERON:0002020!7.02e-18!34;UBERON:0003056!2.80e-17!49;UBERON:0002791!4.11e-15!29;UBERON:0003528!4.11e-15!29;UBERON:0001893!4.11e-15!29;UBERON:0004111!4.87e-14!122;UBERON:0007811!1.82e-13!86;UBERON:0000025!1.96e-13!114;UBERON:0000153!1.26e-12!94;UBERON:0000956!4.59e-11!21;UBERON:0001869!4.59e-11!21;UBERON:0000203!4.59e-11!21;UBERON:0000477!4.08e-09!154;UBERON:0002619!8.44e-09!17;UBERON:0002021!8.35e-08!10;UBERON:0000411!8.35e-08!10;UBERON:0001950!8.35e-08!10;UBERON:0000479!9.95e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.92e-27,75;UBERON:0001017,1.48e-26,73;UBERON:0000073,7.10e-25,54;UBERON:0001049,3.42e-23,52;UBERON:0005068,3.42e-23,52;UBERON:0006241,3.42e-23,52;UBERON:0007135,3.42e-23,52;UBERON:0004121,4.34e-23,95;UBERON:0000924,4.34e-23,95;UBERON:0006601,4.34e-23,95;UBERON:0002346,1.24e-22,64;UBERON:0003075,1.24e-22,64;UBERON:0007284,1.24e-22,64;UBERON:0000955,1.65e-20,47;UBERON:0006238,1.65e-20,47;UBERON:0002616,7.51e-20,46;UBERON:0010314,2.60e-19,92;UBERON:0003080,1.83e-18,40;UBERON:0002780,5.62e-18,39;UBERON:0001890,5.62e-18,39;UBERON:0006240,5.62e-18,39;UBERON:0002020,7.00e-18,34;UBERON:0010371,9.20e-18,73;UBERON:0003056,2.79e-17,49;UBERON:0003528,4.11e-15,29;UBERON:0002791,4.11e-15,29;UBERON:0001893,4.11e-15,29;UBERON:0004111,4.95e-14,122;UBERON:0000025,1.99e-13,114;UBERON:0000956,4.58e-11,21;UBERON:0001869,4.58e-11,21;UBERON:0000203,4.58e-11,21;UBERON:0002619,8.43e-09,17;UBERON:0002021,8.34e-08,10;UBERON:0000411,8.34e-08,10;UBERON:0001950,8.34e-08,10;UBERON:0011216,1.56e-07,194|phase1_expression=8.80818659076367,3.83872948403297,2.27499619694768,3.93203474698879,4.00716583957078,2.35030980676646,2.10251376535973,19.7558684865612,10.6999428835267,15.9163877898956,1.19852577757853,1.19658238493005,2.22560948910567,6.99363219351979,16.9885978525988,20.6524772737622,38.4759032970481,2.05050407482854,2.33094537129756,3.81950686618227,13.0966666832647,4.86525660884338,4.4403964153619,2.23989391910769,3.89995777814189,2.29692785646008,1.29228598847722,1.939241094173,0.760093677825496,0.756090389279792,0.443461021310609,8.25539875497521,8.61090702618398,0,3.17736781726402,3.49092755252834,3.67504841272264,0.418531630736908,0,0,1.17646297606203,0,0.485510353031154,6.54663453473002,8.41428529121971,22.2091570115635,9.38869613217647,7.63088047331563,7.68901639570651,9.52706505463989,6.15940255151595,4.31257693094915,2.68452169692378,7.25362142011344,6.04968838456435,0.514518872071894,1.43266719969378,2.57836046138721,22.0524942336962,33.3264316941381,21.5502677192101,3.38844532069132,8.89294796111139,0,0.988866362566974,1.4209602298922,6.89080254192331,8.83702102239575,31.2105733048518,30.3763361246304,32.3900440481128,29.4220513935918,22.5285911770646,21.313399063402,22.4278402182673,25.7381260250806,39.6417171597799,43.4136949489638,35.329502648936,28.0917792865313,27.3548054371205,28.129322010065,31.2684958881547,29.826418331679,28.5732723342635,33.5876587439981,31.4641414566017,30.5695091153493,18.4014649799637,19.7997487479778,7.24661221754194,2.58127163094416,7.47968467078526,13.4925797909454,11.0461990966104,11.6486990645307,10.9546647702766,9.54409806437123,7.01422212427746,9.18682893726885,20.281452447842,14.115912515575,7.64415719119937,7.11066703153331,3.68034769719064,4.30711771307668,4.54972000513305,7.87868770061514,1.55362730188303,8.75808620482466,6.24547176358089,7.00270600117925,6.22661842591358,7.08396410597326,9.64227398512779,6.91166252313215,6.92145909656247,4.77177877835708,8.84610551949874,21.0296904931632,18.109004513752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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=242083 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BHN0 | |||
|association_with_transcript=0bp_to_NM_178726,uc008pmg.1_5end | |||
|cluster_id=chr3:69120795..69120859,+ | |||
|description=CAGE_peak_1_at_Ppm1l_5end | |||
|id=chr3:69120795..69120859,+ | |||
|ontology_enrichment_celltype=CL:0000540!6.41e-14!33;CL:0000047!6.41e-14!33;CL:0000031!6.41e-14!33;CL:0000404!6.41e-14!33;CL:0000117!3.84e-13!23;CL:0000337!3.84e-13!23;CL:0000221!1.84e-11!44;CL:0000133!1.84e-11!44;CL:0002319!4.31e-11!43;CL:0000393!2.88e-10!39;CL:0000211!2.88e-10!39;CL:0000055!6.92e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.40e-14,33;CL:0000047,6.40e-14,33;CL:0000031,6.40e-14,33;CL:0000404,6.40e-14,33;CL:0000117,3.84e-13,23;CL:0000337,3.84e-13,23;CL:0000221,1.83e-11,44;CL:0000133,1.83e-11,44;CL:0002319,4.30e-11,43;CL:0000393,2.94e-10,39;CL:0000211,2.94e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.92e-27!75;UBERON:0001016!1.92e-27!75;UBERON:0001017!1.48e-26!73;UBERON:0005743!1.48e-26!73;UBERON:0001049!3.43e-23!52;UBERON:0005068!3.43e-23!52;UBERON:0006241!3.43e-23!52;UBERON:0007135!3.43e-23!52;UBERON:0000033!1.43e-22!63;UBERON:0000955!1.47e-22!50;UBERON:0006238!1.47e-22!50;UBERON:0002616!6.90e-22!49;UBERON:0004121!9.62e-21!102;UBERON:0000924!9.62e-21!102;UBERON:0006601!9.62e-21!102;UBERON:0002346!1.74e-19!71;UBERON:0003075!1.74e-19!71;UBERON:0007284!1.74e-19!71;UBERON:0003080!1.83e-18!40;UBERON:0002780!5.64e-18!39;UBERON:0001890!5.64e-18!39;UBERON:0006240!5.64e-18!39;UBERON:0002020!7.02e-18!34;UBERON:0003056!2.80e-17!49;UBERON:0002791!4.11e-15!29;UBERON:0003528!4.11e-15!29;UBERON:0001893!4.11e-15!29;UBERON:0004111!4.87e-14!122;UBERON:0007811!1.82e-13!86;UBERON:0000025!1.96e-13!114;UBERON:0000153!1.26e-12!94;UBERON:0000956!4.59e-11!21;UBERON:0001869!4.59e-11!21;UBERON:0000203!4.59e-11!21;UBERON:0000477!4.08e-09!154;UBERON:0002619!8.44e-09!17;UBERON:0002021!8.35e-08!10;UBERON:0000411!8.35e-08!10;UBERON:0001950!8.35e-08!10;UBERON:0000479!9.95e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.92e-27,75;UBERON:0001017,1.48e-26,73;UBERON:0000073,7.10e-25,54;UBERON:0001049,3.42e-23,52;UBERON:0005068,3.42e-23,52;UBERON:0006241,3.42e-23,52;UBERON:0007135,3.42e-23,52;UBERON:0004121,4.34e-23,95;UBERON:0000924,4.34e-23,95;UBERON:0006601,4.34e-23,95;UBERON:0002346,1.24e-22,64;UBERON:0003075,1.24e-22,64;UBERON:0007284,1.24e-22,64;UBERON:0000955,1.65e-20,47;UBERON:0006238,1.65e-20,47;UBERON:0002616,7.51e-20,46;UBERON:0010314,2.60e-19,92;UBERON:0003080,1.83e-18,40;UBERON:0002780,5.62e-18,39;UBERON:0001890,5.62e-18,39;UBERON:0006240,5.62e-18,39;UBERON:0002020,7.00e-18,34;UBERON:0010371,9.20e-18,73;UBERON:0003056,2.79e-17,49;UBERON:0003528,4.11e-15,29;UBERON:0002791,4.11e-15,29;UBERON:0001893,4.11e-15,29;UBERON:0004111,4.95e-14,122;UBERON:0000025,1.99e-13,114;UBERON:0000956,4.58e-11,21;UBERON:0001869,4.58e-11,21;UBERON:0000203,4.58e-11,21;UBERON:0002619,8.43e-09,17;UBERON:0002021,8.34e-08,10;UBERON:0000411,8.34e-08,10;UBERON:0001950,8.34e-08,10;UBERON:0011216,1.56e-07,194 | |||
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| |||
|short_description=p1@Ppm1l | |||
}} |
Latest revision as of 16:34, 25 September 2015
Short description: | p1@Ppm1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ppm1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_178726, uc008pmg.1_5end |
EntrezGene: | Ppm1l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.40e-14 | 33 |
neuronal stem cell | 6.40e-14 | 33 |
neuroblast | 6.40e-14 | 33 |
electrically signaling cell | 6.40e-14 | 33 |
CNS neuron (sensu Vertebrata) | 3.84e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.84e-13 | 23 |
ectodermal cell | 1.83e-11 | 44 |
neurectodermal cell | 1.83e-11 | 44 |
neural cell | 4.30e-11 | 43 |
electrically responsive cell | 2.94e-10 | 39 |
electrically active cell | 2.94e-10 | 39 |