FFCP PHASE1:Mm9::chr3:55265885..55265899,+: Difference between revisions
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{{FFCP|EntrezGene=13175|HGNC=|MCL_coexpression_id=2|UniProt=Q9JLM6,Q8CCN4,A8IP62,Q8BQN2,Q1EDH1|association_with_transcript=205bp_to_ENSMUST00000070418,NM_001111051,NM_001111052,NM_001195539,NM_001195540,uc008pgn.2,uc008pgo.2,uc008pgp.2,uc008pgq.2,uc008pgr.2,uc012cpq.1,uc012cpr.1_5end|description=CAGE_peak_5_at_Dclk1_5end|id=chr3:55265885..55265899,+|ontology_enrichment_celltype=CL:0000117!2.92e-07!23;CL:0000337!2.92e-07!23|ontology_enrichment_celltype_v019_2=CL:0002614,8.15e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.25e-23!75;UBERON:0001016!8.25e-23!75;UBERON:0001049!1.00e-22!52;UBERON:0005068!1.00e-22!52;UBERON:0006241!1.00e-22!52;UBERON:0007135!1.00e-22!52;UBERON:0000955!1.36e-22!50;UBERON:0006238!1.36e-22!50;UBERON:0000033!7.56e-22!63;UBERON:0002616!9.74e-22!49;UBERON:0001017!1.35e-21!73;UBERON:0005743!1.35e-21!73;UBERON:0002346!1.87e-21!71;UBERON:0003075!1.87e-21!71;UBERON:0007284!1.87e-21!71;UBERON:0004121!5.16e-21!102;UBERON:0000924!5.16e-21!102;UBERON:0006601!5.16e-21!102;UBERON:0003080!7.11e-17!40;UBERON:0003056!1.31e-16!49;UBERON:0002780!3.88e-16!39;UBERON:0001890!3.88e-16!39;UBERON:0006240!3.88e-16!39;UBERON:0002020!4.63e-16!34;UBERON:0002791!8.89e-14!29;UBERON:0003528!8.89e-14!29;UBERON:0001893!8.89e-14!29;UBERON:0000153!4.41e-12!94;UBERON:0007811!2.81e-11!86;UBERON:0002619!1.97e-10!17;UBERON:0000956!2.16e-10!21;UBERON:0001869!2.16e-10!21;UBERON:0000203!2.16e-10!21;UBERON:0002021!3.42e-10!10;UBERON:0000411!3.42e-10!10;UBERON:0001950!3.42e-10!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.71e-39,54;UBERON:0000955,3.88e-38,47;UBERON:0006238,3.88e-38,47;UBERON:0002616,3.16e-36,46;UBERON:0001049,8.19e-36,52;UBERON:0005068,8.19e-36,52;UBERON:0006241,8.19e-36,52;UBERON:0007135,8.19e-36,52;UBERON:0001016,1.30e-33,75;UBERON:0001017,7.72e-33,73;UBERON:0003080,4.14e-31,40;UBERON:0002780,2.02e-29,39;UBERON:0001890,2.02e-29,39;UBERON:0006240,2.02e-29,39;UBERON:0002346,1.21e-27,64;UBERON:0003075,1.21e-27,64;UBERON:0007284,1.21e-27,64;UBERON:0004121,2.59e-26,95;UBERON:0000924,2.59e-26,95;UBERON:0006601,2.59e-26,95;UBERON:0010371,5.91e-25,73;UBERON:0003056,3.59e-24,49;UBERON:0002021,1.27e-22,10;UBERON:0000411,1.27e-22,10;UBERON:0001950,1.27e-22,10;UBERON:0003528,2.12e-21,29;UBERON:0002791,2.12e-21,29;UBERON:0001893,2.12e-21,29;UBERON:0002020,1.69e-19,34;UBERON:0002619,1.46e-17,17;UBERON:0010314,7.15e-17,92;UBERON:0000956,2.73e-16,21;UBERON:0001869,2.73e-16,21;UBERON:0000203,2.73e-16,21;UBERON:0000025,3.92e-12,114;UBERON:0004111,7.74e-11,122;UBERON:0001894,1.02e-08,10;UBERON:0006222,1.02e-08,10;UBERON:0002950,1.38e-08,4;UBERON:0001891,1.38e-08,4;UBERON:0009616,1.38e-08,4;UBERON:0010286,1.38e-08,4;UBERON:0011216,1.02e-07,194;UBERON:0002038,8.15e-07,3;UBERON:0009663,8.15e-07,3;UBERON:0009661,8.15e-07,3;UBERON:0000125,8.15e-07,3;UBERON:0002308,8.15e-07,3|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,6.88850650223665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0,0.419959264876088,0,0,0,0,0,0,0,0.404632921719196,2.64495489636016,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0,0.571301968807607,0.662605622854841,0.857435594504678,0.575072826109418,0,5.50579404996943,8.17198963745201,5.22262213071228,0.263772575460388,0.823388792421687,0,7.81712397203867,7.31591393041184,6.26472815884921,0.589257170947335,1.70846016958924,0.372798891650601,0.681535739998656,1.43585964202892,0,0,0,0,0,0,0.983110940922263,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,0,0,0,0.304465478312141,0.230615497256059,0,0.587943535678524,0.125666591329675,0,0,0,0,0,0,0,12.296793474485,17.8029700791437,0,0,0,0,7.48953197024113,31.5675415944852,3.14135880282161,56.6667283826821,65.2074416192343,5.194701113989,23.3627418817571,0,0.124406970610093,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.281105173679186,0.517406741478031,0.431135985865684,0.756424320671277,0.527853372491847,0,0.278047249225598,0,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.333202336055,3.60166143327496,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0.432276099749388,0.597423819763102,0.189667900953082,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26147300952389,8.67366480782304,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,34.0600595407115,0.567760340833074,0,0,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,12.2558258071364,0,0,0,2.12808280370728,2.49716344642899,2.63278432963394,4.26250928760439,0,0,0,0,2.74489525383039,0.663442174209714,0.119372344003136,0,0.874442509889552,6.48988557036784,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0.418176592028937,0.218362563746178,0.134864346384821,0.495920734352016,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43987218086537,3.84618410961257,0.214368379079066,0,49.6981621503019,45.1118731777033,38.956894913879,52.4152206148247,33.5690434687615,37.0143009720953,47.9265975164582,51.3366171675611,65.7056493027097,34.6899408873719,0.103787347584177,0.399024873401031,0.341467211508268,0.243106717068294,0.419226325255965,0.551530525350042,0.44449345560323,0.618105171716683,0.64183841918363,0.758091635291392,0.25347929989024,0.377252682772152,0.561849044819294,0.640251524048693,0.459483751644906,0,0.463537303779422,0.578727661391115,0.824171801606613,0.294397840268795,0,0.887379030796687,0.476872379894642,0.290692833264657,0.282328141245992,0.592302255241736,0,0.526139422875686,0.271608227691724,0.561142271657738,0.355905054372522,0.492522411877817,0.409231043169689,0,0.192906610981141,0.499621155875892,0.935726433781634,0.644613162144895,0.382576664137687,0,0|short_description=p5@Dclk1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13175 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JLM6,Q8CCN4,A8IP62,Q8BQN2,Q1EDH1 | |||
|association_with_transcript=205bp_to_ENSMUST00000070418,NM_001111051,NM_001111052,NM_001195539,NM_001195540,uc008pgn.2,uc008pgo.2,uc008pgp.2,uc008pgq.2,uc008pgr.2,uc012cpq.1,uc012cpr.1_5end | |||
|cluster_id=chr3:55265885..55265899,+ | |||
|description=CAGE_peak_5_at_Dclk1_5end | |||
|id=chr3:55265885..55265899,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.92e-07!23;CL:0000337!2.92e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,8.15e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.25e-23!75;UBERON:0001016!8.25e-23!75;UBERON:0001049!1.00e-22!52;UBERON:0005068!1.00e-22!52;UBERON:0006241!1.00e-22!52;UBERON:0007135!1.00e-22!52;UBERON:0000955!1.36e-22!50;UBERON:0006238!1.36e-22!50;UBERON:0000033!7.56e-22!63;UBERON:0002616!9.74e-22!49;UBERON:0001017!1.35e-21!73;UBERON:0005743!1.35e-21!73;UBERON:0002346!1.87e-21!71;UBERON:0003075!1.87e-21!71;UBERON:0007284!1.87e-21!71;UBERON:0004121!5.16e-21!102;UBERON:0000924!5.16e-21!102;UBERON:0006601!5.16e-21!102;UBERON:0003080!7.11e-17!40;UBERON:0003056!1.31e-16!49;UBERON:0002780!3.88e-16!39;UBERON:0001890!3.88e-16!39;UBERON:0006240!3.88e-16!39;UBERON:0002020!4.63e-16!34;UBERON:0002791!8.89e-14!29;UBERON:0003528!8.89e-14!29;UBERON:0001893!8.89e-14!29;UBERON:0000153!4.41e-12!94;UBERON:0007811!2.81e-11!86;UBERON:0002619!1.97e-10!17;UBERON:0000956!2.16e-10!21;UBERON:0001869!2.16e-10!21;UBERON:0000203!2.16e-10!21;UBERON:0002021!3.42e-10!10;UBERON:0000411!3.42e-10!10;UBERON:0001950!3.42e-10!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.71e-39,54;UBERON:0000955,3.88e-38,47;UBERON:0006238,3.88e-38,47;UBERON:0002616,3.16e-36,46;UBERON:0001049,8.19e-36,52;UBERON:0005068,8.19e-36,52;UBERON:0006241,8.19e-36,52;UBERON:0007135,8.19e-36,52;UBERON:0001016,1.30e-33,75;UBERON:0001017,7.72e-33,73;UBERON:0003080,4.14e-31,40;UBERON:0002780,2.02e-29,39;UBERON:0001890,2.02e-29,39;UBERON:0006240,2.02e-29,39;UBERON:0002346,1.21e-27,64;UBERON:0003075,1.21e-27,64;UBERON:0007284,1.21e-27,64;UBERON:0004121,2.59e-26,95;UBERON:0000924,2.59e-26,95;UBERON:0006601,2.59e-26,95;UBERON:0010371,5.91e-25,73;UBERON:0003056,3.59e-24,49;UBERON:0002021,1.27e-22,10;UBERON:0000411,1.27e-22,10;UBERON:0001950,1.27e-22,10;UBERON:0003528,2.12e-21,29;UBERON:0002791,2.12e-21,29;UBERON:0001893,2.12e-21,29;UBERON:0002020,1.69e-19,34;UBERON:0002619,1.46e-17,17;UBERON:0010314,7.15e-17,92;UBERON:0000956,2.73e-16,21;UBERON:0001869,2.73e-16,21;UBERON:0000203,2.73e-16,21;UBERON:0000025,3.92e-12,114;UBERON:0004111,7.74e-11,122;UBERON:0001894,1.02e-08,10;UBERON:0006222,1.02e-08,10;UBERON:0002950,1.38e-08,4;UBERON:0001891,1.38e-08,4;UBERON:0009616,1.38e-08,4;UBERON:0010286,1.38e-08,4;UBERON:0011216,1.02e-07,194;UBERON:0002038,8.15e-07,3;UBERON:0009663,8.15e-07,3;UBERON:0009661,8.15e-07,3;UBERON:0000125,8.15e-07,3;UBERON:0002308,8.15e-07,3 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,6.88850650223665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0,0.419959264876088,0,0,0,0,0,0,0,0.404632921719196,2.64495489636016,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0,0.571301968807607,0.662605622854841,0.857435594504678,0.575072826109418,0,5.50579404996943,8.17198963745201,5.22262213071228,0.263772575460388,0.823388792421687,0,7.81712397203867,7.31591393041184,6.26472815884921,0.589257170947335,1.70846016958924,0.372798891650601,0.681535739998656,1.43585964202892,0,0,0,0,0,0,0.983110940922263,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,0,0,0,0.304465478312141,0.230615497256059,0,0.587943535678524,0.125666591329675,0,0,0,0,0,0,0,12.296793474485,17.8029700791437,0,0,0,0,7.48953197024113,31.5675415944852,3.14135880282161,56.6667283826821,65.2074416192343,5.194701113989,23.3627418817571,0,0.124406970610093,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.281105173679186,0.517406741478031,0.431135985865684,0.756424320671277,0.527853372491847,0,0.278047249225598,0,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.333202336055,3.60166143327496,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0.432276099749388,0.597423819763102,0.189667900953082,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26147300952389,8.67366480782304,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,34.0600595407115,0.567760340833074,0,0,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,12.2558258071364,0,0,0,2.12808280370728,2.49716344642899,2.63278432963394,4.26250928760439,0,0,0,0,2.74489525383039,0.663442174209714,0.119372344003136,0,0.874442509889552,6.48988557036784,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0.418176592028937,0.218362563746178,0.134864346384821,0.495920734352016,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43987218086537,3.84618410961257,0.214368379079066,0,49.6981621503019,45.1118731777033,38.956894913879,52.4152206148247,33.5690434687615,37.0143009720953,47.9265975164582,51.3366171675611,65.7056493027097,34.6899408873719,0.103787347584177,0.399024873401031,0.341467211508268,0.243106717068294,0.419226325255965,0.551530525350042,0.44449345560323,0.618105171716683,0.64183841918363,0.758091635291392,0.25347929989024,0.377252682772152,0.561849044819294,0.640251524048693,0.459483751644906,0,0.463537303779422,0.578727661391115,0.824171801606613,0.294397840268795,0,0.887379030796687,0.476872379894642,0.290692833264657,0.282328141245992,0.592302255241736,0,0.526139422875686,0.271608227691724,0.561142271657738,0.355905054372522,0.492522411877817,0.409231043169689,0,0.192906610981141,0.499621155875892,0.935726433781634,0.644613162144895,0.382576664137687,0,0 | |||
|short_description=p5@Dclk1 | |||
}} |
Latest revision as of 14:34, 25 September 2015
Short description: | p5@Dclk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Dclk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 205bp_to_ENSMUST00000070418, NM_001111051, NM_001111052, NM_001195539, NM_001195540, uc008pgn.2, uc008pgo.2, uc008pgp.2, uc008pgq.2, uc008pgr.2, uc012cpq.1, uc012cpr.1_5end |
EntrezGene: | Dclk1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 8.15e-07 | 3 |