FFCP PHASE1:Hg19::chr7:82172409..82172413,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:82172409..82172413,+ | |||
|description=CAGE_peak_at_chr7:82172409..82172413,+ | |||
|id=chr7:82172409..82172413,+ | |||
|ontology_enrichment_celltype=CL:0000192!1.60e-20!42;CL:0000514!1.60e-20!42;CL:0000680!7.74e-20!57;CL:0000056!7.74e-20!57;CL:0000355!7.74e-20!57;CL:0000359!3.65e-19!32;CL:0000187!3.82e-18!54;CL:0000183!2.17e-16!59;CL:0000393!4.48e-16!60;CL:0000211!4.48e-16!60;CL:1000306!1.23e-15!4;CL:0002547!1.23e-15!4;CL:0000055!1.61e-14!180;CL:0002494!2.44e-14!16;CL:0002589!2.63e-14!2;CL:0002548!1.70e-10!6;CL:0002592!5.99e-10!3;CL:0002590!8.52e-10!3;CL:0000222!1.91e-09!119;CL:0002582!3.52e-09!3;CL:0002598!7.45e-08!1;CL:0000342!1.11e-07!1;CL:0002565!1.11e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002589;4.90e-26;2!CL:0002596;4.90e-26;2!CL:0002592;1.12e-17;3!CL:1000306;1.13e-13;4!CL:0002547;1.13e-13;4!CL:0000359;7.86e-13;32!CL:0000192;2.07e-10;43!CL:0000393;3.82e-08;61!CL:0000211;3.82e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002596,4.32e-26,2;CL:0002589,5.56e-26,2;CL:0002592,1.12e-17,3;CL:0000359,8.02e-15,32;CL:1000306,1.13e-13,4;CL:0002547,1.13e-13,4;CL:0000192,2.84e-11,43;CL:0000514,2.84e-11,43;CL:0000187,5.25e-09,55;CL:0000680,1.39e-08,58;CL:0000056,1.39e-08,58;CL:0000355,1.39e-08,58;CL:0000393,3.34e-08,61;CL:0000211,3.34e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.07e-10;43!CL:0000355;1.90e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!1.43e-18!33;UBERON:0004571!1.43e-18!33;UBERON:0001134!2.36e-18!61;UBERON:0002036!2.36e-18!61;UBERON:0003082!2.36e-18!61;UBERON:0002385!1.10e-17!63;UBERON:0001015!1.10e-17!63;UBERON:0000383!1.10e-17!63;UBERON:0001637!2.92e-17!42;UBERON:0003509!2.92e-17!42;UBERON:0004572!2.92e-17!42;UBERON:0004535!8.19e-16!110;UBERON:0004290!1.23e-15!70;UBERON:0000415!1.23e-15!4;UBERON:0007240!1.23e-15!4;UBERON:0005742!1.23e-15!4;UBERON:0005734!1.23e-15!4;UBERON:0004664!1.23e-15!4;UBERON:0004663!1.23e-15!4;UBERON:0001009!2.69e-15!113;UBERON:0004872!9.49e-15!84;UBERON:0001529!2.63e-14!2;UBERON:0007204!2.63e-14!2;UBERON:0002049!1.07e-13!79;UBERON:0007798!1.07e-13!79;UBERON:0000486!6.08e-13!82;UBERON:0000914!9.40e-13!83;UBERON:0002329!9.40e-13!83;UBERON:0003077!9.40e-13!83;UBERON:0003059!9.40e-13!83;UBERON:0007282!9.40e-13!83;UBERON:0009618!9.40e-13!83;UBERON:0007285!9.40e-13!83;UBERON:0001981!1.80e-11!60;UBERON:0007500!1.80e-11!60;UBERON:0004537!1.80e-11!60;UBERON:0006965!1.80e-11!60;UBERON:0003914!4.48e-11!118;UBERON:0001621!5.99e-10!3;UBERON:0000055!1.03e-09!69;UBERON:0000948!2.23e-09!24;UBERON:0005498!2.23e-09!24;UBERON:0004140!2.23e-09!24;UBERON:0009881!2.23e-09!24;UBERON:0004141!2.23e-09!24;UBERON:0003084!2.23e-09!24;UBERON:0007005!2.23e-09!24;UBERON:0004139!2.23e-09!24;UBERON:0004291!2.23e-09!24;UBERON:0007100!2.83e-08!27;UBERON:0000947!8.49e-08!21;UBERON:0010191!8.49e-08!21;UBERON:0002506!1.11e-07!1;UBERON:0001769!1.11e-07!1;UBERON:0005256!2.62e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;4.90e-26;2!UBERON:0005396;4.90e-26;2!UBERON:0007204;4.90e-26;2!UBERON:0004573;2.13e-22;33!UBERON:0004571;2.13e-22;33!UBERON:0003498;1.12e-17;3!UBERON:0005985;1.12e-17;3!UBERON:0001621;1.12e-17;3!UBERON:0001637;9.06e-15;42!UBERON:0003509;9.06e-15;42!UBERON:0004572;9.06e-15;42!UBERON:0004797;1.13e-13;4!UBERON:0000415;1.13e-13;4!UBERON:0007240;1.13e-13;4!UBERON:0005742;1.13e-13;4!UBERON:0005734;1.13e-13;4!UBERON:0004664;1.13e-13;4!UBERON:0004663;1.13e-13;4!UBERON:0007500;9.49e-09;56!UBERON:0001981;9.49e-09;56!UBERON:0004537;9.49e-09;56!UBERON:0002049;8.09e-07;75!UBERON:0007798;8.09e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,4.32e-26,2;UBERON:0001529,5.56e-26,2;UBERON:0007204,5.56e-26,2;UBERON:0004573,9.87e-25,33;UBERON:0004571,9.87e-25,33;UBERON:0001637,1.19e-19,42;UBERON:0003509,1.19e-19,42;UBERON:0004572,1.19e-19,42;UBERON:0001621,1.12e-17,3;UBERON:0007500,2.92e-14,59;UBERON:0001981,2.92e-14,59;UBERON:0004537,2.92e-14,59;UBERON:0006965,2.92e-14,59;UBERON:0000415,1.13e-13,4;UBERON:0007240,1.13e-13,4;UBERON:0005742,1.13e-13,4;UBERON:0005734,1.13e-13,4;UBERON:0004664,1.13e-13,4;UBERON:0004663,1.13e-13,4;UBERON:0000055,1.71e-12,68;UBERON:0003498,3.60e-11,5;UBERON:0005985,3.60e-11,5;UBERON:0002049,5.31e-11,78;UBERON:0007798,5.31e-11,78;UBERON:0004872,2.17e-10,83;UBERON:0004797,2.18e-08,7;UBERON:0004535,4.22e-08,109;UBERON:0001134,4.39e-08,62;UBERON:0002036,4.39e-08,62;UBERON:0003082,4.39e-08,62;UBERON:0001009,6.64e-08,112;UBERON:0002385,7.40e-08,64;UBERON:0001015,7.40e-08,64;UBERON:0000383,7.40e-08,64;UBERON:0003914,1.34e-07,117;UBERON:0002329,3.66e-07,71;UBERON:0003059,3.66e-07,71;UBERON:0007282,3.66e-07,71;UBERON:0004290,3.66e-07,71;UBERON:0009618,3.66e-07,71;UBERON:0003077,4.49e-07,72;UBERON:0007285,4.49e-07,72;UBERON:0007524,5.48e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91300197789081,0.286836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.62962469366128,0,0.924100740528266,0,0,0.18532421910392,3.14874750832381,0,0.949138274156178,0.190630193923825,0.255897791311334,0,3.5002357271853,0,0,0,0,0.404364963146632,1.58510321173008,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:82172409..82172413,+ | |||
}} |
Latest revision as of 12:05, 31 July 2015
Short description: | p@chr7:82172409..82172413, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:82172409..82172413, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 4.32e-26 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 5.56e-26 | 2 |
smooth muscle cell of the coronary artery | 1.12e-17 | 3 |
vascular associated smooth muscle cell | 8.02e-15 | 32 |
fibroblast of tunica adventitia of artery | 1.13e-13 | 4 |
fibroblast of the aortic adventitia | 1.13e-13 | 4 |
smooth muscle cell | 2.84e-11 | 43 |
smooth muscle myoblast | 2.84e-11 | 43 |
muscle cell | 5.25e-09 | 55 |
muscle precursor cell | 1.39e-08 | 58 |
myoblast | 1.39e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-08 | 58 |
electrically responsive cell | 3.34e-08 | 61 |
electrically active cell | 3.34e-08 | 61 |