FFCP PHASE1:Hg19::chr7:76139896..76139907,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80761 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21444 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-24bp_to_ENST00000394849_5end | |||
|cluster_id=chr7:76139896..76139907,+ | |||
|coexpression_cluster_id=C1193 | |||
|description=CAGE_peak_4_at_UPK3B_5end | |||
|id=chr7:76139896..76139907,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.21e-18!254;CL:0002076!8.90e-16!43;CL:0000223!3.60e-10!59;CL:0000077!3.35e-08!19;CL:0002251!1.20e-07!21;CL:0000076!1.52e-07!62;CL:0002368!4.03e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000077;9.39e-12;19!CL:0002586;1.68e-09;3!CL:0000244;1.30e-07;4!CL:0000731;1.30e-07;4!CL:0000149;3.26e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,8.93e-12,19;CL:0002586,1.24e-09,3;CL:0000066,2.71e-08,253;CL:0000076,4.98e-08,63;CL:0000244,1.33e-07,4;CL:0000731,1.33e-07,4;CL:0000149,2.61e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.23e-11!106;DOID:299!8.83e-10!25;DOID:0050687!1.52e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:299;4.61e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,4.89e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.82e-16!169;UBERON:0000925!4.82e-16!169;UBERON:0006595!4.82e-16!169;UBERON:0001007!2.47e-12!155;UBERON:0001555!2.47e-12!155;UBERON:0007026!2.47e-12!155;UBERON:0004921!7.93e-11!129;UBERON:0004185!7.93e-11!129;UBERON:0000077!8.98e-11!130;UBERON:0005911!1.47e-10!82;UBERON:0001004!7.80e-09!72;UBERON:0000065!4.59e-08!53;UBERON:0005181!4.94e-08!35;UBERON:0000344!1.16e-07!12;UBERON:0001041!2.88e-07!98;UBERON:0005178!3.12e-07!34;UBERON:0002224!3.12e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.68e-09;3!UBERON:0001782;1.68e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.24e-09,3;UBERON:0005424,1.24e-09,3;UBERON:0001781,2.61e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,1.54816123316076,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,3.01251873644739,1.45718115317017,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,2.83734705758686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818238361772504,2.86804595389004,0,0.132529768321485,0,0.207322110030741,1.00928340350251,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,3.2925920906512,4.41026134156626,0,0,0,0,0.368965315629341,0,0.329250856225877,1.1240175325762,0.301586917234893,0.185176890317059,0,0,0,0,0,0,0,0,7.11183958163348,6.00940313466411,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.94749944296634,6.10073421020206,48.4869007232977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,7.69350375349168,15.7447029935859,1.62689197332152,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.384380134730212,0.382838137483752,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,2.01090682660736,0,0.0941438007767792,9.47111819876706,0,16.406915680857,5.51336160496703,0,0,0,0,0,0,0,0,0.320472213382419,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0.284136146806413,2.86493381685228,46.9204195715569,22.4227312532439,0,0,0,0,0,2.19172787076177,1.10513566212459,0,0,0,0,0.808815160325942,0,0,1.1837208676432,0,0,0,0,0,0,0,0,2.84483620713749,0.254253650292766,5.43691668066254,0,0,0.173624994933292,0,0,0,0,0,0,0,1.25481369850743,0.0769502585037971,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,25.6275508809862,0.141353071433941,0,0,0.265372693510018,0.611030144933625,0,0,0,0,11.236087062183,0,0,3.91329237864179,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0.330991955875499,0.941798755221676,0,0.569219092059585,0,8.50442717842141,3.13575671726008,0,0.52418000472609,0,0.290268993867255,0.219267951258557,0.410577285266046,3.87956065953678,0.0882561266915003,0.225980740780532,0,0,0,0.195551382734803,2.08412932653988,0.213452994739353,2.59752492456769,7.63679210916762,0,0,0,0,0.235694034616795,1.08723364858891,0.836822770498666,0,0,0,0,0,0,0,0,0,0,22.164369055388,0.858452096273142,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0.314727528809989,0,0,0,1.42939065274673,1.32418394073086,8.39086174260675,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0.513260513652988,2.11444506695002,4.91222097811396,1.10043013569766,4.55662960881915,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.665574309221114,0.18628920882415,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601030435988874,1.14241563650639,0,0,0.107410557042488,0,0,0,0,0,0,0,14.1531450307451,4.95889154733902,0.226705925512272,0,0,0.179088841081487,48.4818272042726,21.709120908292,0,67.905741471362,3.54779125371453,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0.279759015438889,0.622077260032973,1.40683808434017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57036349601641,0.235939446695481,0.733714394086716,0.231051332300676,0,0,0,1.0529445968896,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0.709163045303809,0.111231401892069,0.156986185701028,0,0.280272163313789,0,1.94334832096759,0,0,0.316027223465453,0.929931402945002,0,0,0.207216164163037,0,0,0,0,0,0,3.2074961596167,0,0,9.84327799820572,0,9.99726984854609,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,1.46067277649303,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.909344378618873,0.535928260312357,0,0,2.34557380091079,0.476128862927481,0.0645889098360061,0.31037357147929,0.112131862580613,0,0,0.653150243690884,2.73786640868225,3.2328985447002,0.286888821570705,0,0.569822880276821,0.426909383510862,0,0,11.7320471201727,0,0.813792356631477,0,1.00636896795513,0 | |||
|short_description=p4@UPK3B | |||
}} |
Latest revision as of 14:08, 19 September 2015
Short description: | p4@UPK3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_UPK3B_5end |
Coexpression cluster: | C1193_mesothelioma_Mesothelial_Retinal_clear_amniotic_serous_Urothelial |
Association with transcript: | -24bp_to_ENST00000394849_5end |
EntrezGene: | UPK3B |
HGNC: | 21444 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 8.93e-12 | 19 |
retinal pigment epithelial cell | 1.24e-09 | 3 |
epithelial cell | 2.71e-08 | 253 |
squamous epithelial cell | 4.98e-08 | 63 |
transitional epithelial cell | 1.33e-07 | 4 |
urothelial cell | 1.33e-07 | 4 |
visual pigment cell | 2.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.24e-09 | 3 |
presumptive retinal pigmented epithelium | 1.24e-09 | 3 |
layer of retina | 2.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 4.89e-10 | 25 |