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FFCP PHASE1:Mm9::chr3:146433567..146433628,-: Difference between revisions

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{{FFCP|EntrezGene=18749|HGNC=|MCL_coexpression_id=1|UniProt=P68181|association_with_transcript=28bp_to_NM_001164199,uc008rrt.2_5end|description=CAGE_peak_4_at_Prkacb_5end|id=chr3:146433567..146433628,-|ontology_enrichment_celltype=CL:0000117!1.31e-13!23;CL:0000337!1.31e-13!23;CL:0000540!1.73e-09!33;CL:0000047!1.73e-09!33;CL:0000031!1.73e-09!33;CL:0000404!1.73e-09!33;CL:0000393!7.34e-08!39;CL:0000211!7.34e-08!39;CL:0000221!9.66e-07!44;CL:0000133!9.66e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.65e-17,23;CL:0000337,2.65e-17,23;CL:0000540,3.94e-10,33;CL:0000047,3.94e-10,33;CL:0000031,3.94e-10,33;CL:0000404,3.94e-10,33;CL:0000393,6.64e-08,39;CL:0000211,6.64e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.87e-25!71;UBERON:0003075!5.87e-25!71;UBERON:0007284!5.87e-25!71;UBERON:0001049!1.20e-23!52;UBERON:0005068!1.20e-23!52;UBERON:0006241!1.20e-23!52;UBERON:0007135!1.20e-23!52;UBERON:0000955!2.17e-22!50;UBERON:0006238!2.17e-22!50;UBERON:0000033!2.54e-22!63;UBERON:0000073!5.42e-22!75;UBERON:0001016!5.42e-22!75;UBERON:0001017!7.35e-22!73;UBERON:0005743!7.35e-22!73;UBERON:0002616!9.58e-22!49;UBERON:0004121!1.19e-20!102;UBERON:0000924!1.19e-20!102;UBERON:0006601!1.19e-20!102;UBERON:0002020!4.18e-19!34;UBERON:0003056!5.35e-19!49;UBERON:0003080!4.09e-18!40;UBERON:0002780!2.28e-17!39;UBERON:0001890!2.28e-17!39;UBERON:0006240!2.28e-17!39;UBERON:0002791!3.94e-16!29;UBERON:0003528!3.94e-16!29;UBERON:0001893!3.94e-16!29;UBERON:0000956!2.26e-11!21;UBERON:0001869!2.26e-11!21;UBERON:0000203!2.26e-11!21;UBERON:0007811!2.99e-10!86;UBERON:0002619!3.04e-09!17;UBERON:0002021!1.31e-08!10;UBERON:0000411!1.31e-08!10;UBERON:0001950!1.31e-08!10;UBERON:0000153!3.32e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.03e-28,54;UBERON:0001049,4.12e-27,52;UBERON:0005068,4.12e-27,52;UBERON:0006241,4.12e-27,52;UBERON:0007135,4.12e-27,52;UBERON:0002346,6.32e-26,64;UBERON:0003075,6.32e-26,64;UBERON:0007284,6.32e-26,64;UBERON:0002020,2.70e-24,34;UBERON:0001017,2.05e-23,73;UBERON:0000955,5.66e-23,47;UBERON:0006238,5.66e-23,47;UBERON:0001016,3.09e-22,75;UBERON:0002616,3.56e-22,46;UBERON:0003528,2.09e-20,29;UBERON:0002791,2.09e-20,29;UBERON:0001893,2.09e-20,29;UBERON:0003080,2.36e-20,40;UBERON:0003056,2.45e-20,49;UBERON:0010371,2.89e-20,73;UBERON:0002780,2.05e-19,39;UBERON:0001890,2.05e-19,39;UBERON:0006240,2.05e-19,39;UBERON:0004121,5.62e-18,95;UBERON:0000924,5.62e-18,95;UBERON:0006601,5.62e-18,95;UBERON:0010314,7.03e-17,92;UBERON:0000956,3.43e-14,21;UBERON:0001869,3.43e-14,21;UBERON:0000203,3.43e-14,21;UBERON:0002619,2.04e-11,17;UBERON:0002021,9.01e-11,10;UBERON:0000411,9.01e-11,10;UBERON:0001950,9.01e-11,10;UBERON:0002420,2.03e-07,8;UBERON:0007245,2.03e-07,8;UBERON:0010009,2.03e-07,8;UBERON:0010011,2.03e-07,8;UBERON:0000454,2.03e-07,8;UBERON:0003076,3.07e-07,12;UBERON:0003057,3.07e-07,12|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0.16787927191189,0,0.129123323441576,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,10.8004978491859,0,0,0.319984845586813,0,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0.699932108126813,0,0,0,0,1.54355661621568,0.85960031981627,0.515672092277442,8.49729135610311,13.7537654610729,8.87363964908651,0,0.889294796111139,0,0,0,0,0,7.98410014775278,8.77538599155989,6.09942387919008,33.1355141908412,36.6641777979678,4.65465037016825,4.2172007248024,4.5960939330501,44.0463523997555,52.0964339387566,49.9221233082791,8.83638127792299,10.0636407962651,8.85552729946492,59.1867957882928,45.5837714125661,61.5776938540545,27.9897156199984,30.7522830526062,16.5895506784518,0.984440513331393,0.529000920747499,0.289864488701678,0,0.679971333707751,0,0,0,3.08977724289854,0,0,0,0.563373679106722,0,0,0,0,0,0,1.94112595522402,0.776813650941515,2.07818994690755,0.346970653532272,2.43572382649713,0.691846491768175,1.80867168663147,3.41007250693544,1.38233250462643,0,0.433798070759735,0,0,0,0,0,47.7232699128822,48.5916359807216,0,0,0,0,73.3974133083631,62.2200819833332,20.1046963380583,72.310917199987,65.2074416192343,56.7261361647599,55.3242707061054,0.101839363850316,0,0,1.89397670297827,0,0.689706313300419,0.900310649026746,1.50704817835715,3.19771546011241,2.562274405697,2.90475346135159,11.6416516832557,0,0,0.527853372491847,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0.590292695242212,0.462801338662135,0.697601834251224,0,2.21854150497622,0,0.164167464079095,0.648550476366846,0.438599962275997,0.658650345873152,0.402619256281115,45.4226288898515,17.6995933292369,0.330418782983798,0.264450566663544,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.380451252225118,0,0.658795818896044,1.50801125280162,1.98956472041151,1.36474860983384,0.898819408654221,0.648414149624083,0.597423819763102,0,0.342745537829186,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0.167506257441816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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18749
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P68181
|association_with_transcript=28bp_to_NM_001164199,uc008rrt.2_5end
|cluster_id=chr3:146433567..146433628,-
|description=CAGE_peak_4_at_Prkacb_5end
|id=chr3:146433567..146433628,-
|ontology_enrichment_celltype=CL:0000117!1.31e-13!23;CL:0000337!1.31e-13!23;CL:0000540!1.73e-09!33;CL:0000047!1.73e-09!33;CL:0000031!1.73e-09!33;CL:0000404!1.73e-09!33;CL:0000393!7.34e-08!39;CL:0000211!7.34e-08!39;CL:0000221!9.66e-07!44;CL:0000133!9.66e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,2.65e-17,23;CL:0000337,2.65e-17,23;CL:0000540,3.94e-10,33;CL:0000047,3.94e-10,33;CL:0000031,3.94e-10,33;CL:0000404,3.94e-10,33;CL:0000393,6.64e-08,39;CL:0000211,6.64e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.87e-25!71;UBERON:0003075!5.87e-25!71;UBERON:0007284!5.87e-25!71;UBERON:0001049!1.20e-23!52;UBERON:0005068!1.20e-23!52;UBERON:0006241!1.20e-23!52;UBERON:0007135!1.20e-23!52;UBERON:0000955!2.17e-22!50;UBERON:0006238!2.17e-22!50;UBERON:0000033!2.54e-22!63;UBERON:0000073!5.42e-22!75;UBERON:0001016!5.42e-22!75;UBERON:0001017!7.35e-22!73;UBERON:0005743!7.35e-22!73;UBERON:0002616!9.58e-22!49;UBERON:0004121!1.19e-20!102;UBERON:0000924!1.19e-20!102;UBERON:0006601!1.19e-20!102;UBERON:0002020!4.18e-19!34;UBERON:0003056!5.35e-19!49;UBERON:0003080!4.09e-18!40;UBERON:0002780!2.28e-17!39;UBERON:0001890!2.28e-17!39;UBERON:0006240!2.28e-17!39;UBERON:0002791!3.94e-16!29;UBERON:0003528!3.94e-16!29;UBERON:0001893!3.94e-16!29;UBERON:0000956!2.26e-11!21;UBERON:0001869!2.26e-11!21;UBERON:0000203!2.26e-11!21;UBERON:0007811!2.99e-10!86;UBERON:0002619!3.04e-09!17;UBERON:0002021!1.31e-08!10;UBERON:0000411!1.31e-08!10;UBERON:0001950!1.31e-08!10;UBERON:0000153!3.32e-08!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.03e-28,54;UBERON:0001049,4.12e-27,52;UBERON:0005068,4.12e-27,52;UBERON:0006241,4.12e-27,52;UBERON:0007135,4.12e-27,52;UBERON:0002346,6.32e-26,64;UBERON:0003075,6.32e-26,64;UBERON:0007284,6.32e-26,64;UBERON:0002020,2.70e-24,34;UBERON:0001017,2.05e-23,73;UBERON:0000955,5.66e-23,47;UBERON:0006238,5.66e-23,47;UBERON:0001016,3.09e-22,75;UBERON:0002616,3.56e-22,46;UBERON:0003528,2.09e-20,29;UBERON:0002791,2.09e-20,29;UBERON:0001893,2.09e-20,29;UBERON:0003080,2.36e-20,40;UBERON:0003056,2.45e-20,49;UBERON:0010371,2.89e-20,73;UBERON:0002780,2.05e-19,39;UBERON:0001890,2.05e-19,39;UBERON:0006240,2.05e-19,39;UBERON:0004121,5.62e-18,95;UBERON:0000924,5.62e-18,95;UBERON:0006601,5.62e-18,95;UBERON:0010314,7.03e-17,92;UBERON:0000956,3.43e-14,21;UBERON:0001869,3.43e-14,21;UBERON:0000203,3.43e-14,21;UBERON:0002619,2.04e-11,17;UBERON:0002021,9.01e-11,10;UBERON:0000411,9.01e-11,10;UBERON:0001950,9.01e-11,10;UBERON:0002420,2.03e-07,8;UBERON:0007245,2.03e-07,8;UBERON:0010009,2.03e-07,8;UBERON:0010011,2.03e-07,8;UBERON:0000454,2.03e-07,8;UBERON:0003076,3.07e-07,12;UBERON:0003057,3.07e-07,12
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|short_description=p4@Prkacb
}}

Latest revision as of 18:56, 1 October 2015

Short description:p4@Prkacb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Prkacb_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 28bp_to_NM_001164199, uc008rrt.2_5end
EntrezGene:Prkacb
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Prkacb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F133.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D536.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D344.05
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F352.10
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D749.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E459.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E545.58
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I661.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.99
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F630.75
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B247.72
cerebellum, neonate N30.CNhs11135.1395-42I248.59
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A473.40
corpus striatum, adult.CNhs10487.19-21D862.22
corpus striatum, neonate N00.CNhs11226.630-43F120.10
cortex, adult.CNhs10473.12-14D572.31
cortex, neonate N30.CNhs11107.1392-42F265.21
diencephalon, adult.CNhs10482.20-12F256.73
diencephalon, neonate N30.CNhs11201.1388-42B255.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C63.20
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A211.64
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E845.42
hippocampus, neonate N00.CNhs11228.627-43G117.70
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C271.77
medulla oblongata, neonate N30.CNhs11200.1396-42A373.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I941.13
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C976.95
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A181.32
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A299.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A379.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D768.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A476.04
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A564.96
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A660.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A765.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A877.94
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A958.51
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.65e-1723
neuroblast (sensu Vertebrata)2.65e-1723
neuron3.94e-1033
neuronal stem cell3.94e-1033
neuroblast3.94e-1033
electrically signaling cell3.94e-1033
electrically responsive cell6.64e-0839
electrically active cell6.64e-0839

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.03e-2854
neural tube4.12e-2752
neural rod4.12e-2752
future spinal cord4.12e-2752
neural keel4.12e-2752
neurectoderm6.32e-2664
neural plate6.32e-2664
presumptive neural plate6.32e-2664
gray matter2.70e-2434
central nervous system2.05e-2373
brain5.66e-2347
future brain5.66e-2347
nervous system3.09e-2275
regional part of brain3.56e-2246
brain grey matter2.09e-2029
regional part of telencephalon2.09e-2029
telencephalon2.09e-2029
anterior neural tube2.36e-2040
pre-chordal neural plate2.45e-2049
ecto-epithelium2.89e-2073
regional part of forebrain2.05e-1939
forebrain2.05e-1939
future forebrain2.05e-1939
ectoderm-derived structure5.62e-1895
ectoderm5.62e-1895
presumptive ectoderm5.62e-1895
structure with developmental contribution from neural crest7.03e-1792
cerebral cortex3.43e-1421
cerebral hemisphere3.43e-1421
pallium3.43e-1421
regional part of cerebral cortex2.04e-1117
occipital lobe9.01e-1110
visual cortex9.01e-1110
neocortex9.01e-1110
basal ganglion2.03e-078
nuclear complex of neuraxis2.03e-078
aggregate regional part of brain2.03e-078
collection of basal ganglia2.03e-078
cerebral subcortex2.03e-078
posterior neural tube3.07e-0712
chordal neural plate3.07e-0712
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