FFCP PHASE1:Mm9::chr10:3557489..3557496,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:3557489..3557496,-
|short_description=p9@Oprm1
|description=CAGE_peak_9_at_Oprm1_5end
|association_with_transcript=19bp_to_ENSMUST00000133486_5end
|Entre...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18390 | |EntrezGene=18390 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENSMUST00000133486_5end | |||
|cluster_id=chr10:3557489..3557496,- | |||
|description=CAGE_peak_9_at_Oprm1_5end | |||
|id=chr10:3557489..3557496,- | |||
|ontology_enrichment_celltype=CL:0000117!2.42e-12!23;CL:0000337!2.42e-12!23;CL:0000540!1.56e-09!33;CL:0000047!1.56e-09!33;CL:0000031!1.56e-09!33;CL:0000404!1.56e-09!33;CL:0002610!1.84e-09!3;CL:0002614!6.85e-09!3;CL:0002319!6.16e-08!43;CL:0000221!1.07e-07!44;CL:0000133!1.07e-07!44;CL:0000393!1.08e-07!39;CL:0000211!1.08e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.41e-17,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!4.21e-17!6;UBERON:0000073!3.19e-16!75;UBERON:0001016!3.19e-16!75;UBERON:0001017!2.51e-15!73;UBERON:0005743!2.51e-15!73;UBERON:0001049!2.38e-13!52;UBERON:0005068!2.38e-13!52;UBERON:0006241!2.38e-13!52;UBERON:0007135!2.38e-13!52;UBERON:0000955!1.67e-12!50;UBERON:0006238!1.67e-12!50;UBERON:0002950!1.40e-11!4;UBERON:0001891!1.40e-11!4;UBERON:0009616!1.40e-11!4;UBERON:0002240!2.06e-11!6;UBERON:0005174!2.06e-11!6;UBERON:0001137!2.06e-11!6;UBERON:0002616!3.49e-11!49;UBERON:0003076!8.22e-11!12;UBERON:0003057!8.22e-11!12;UBERON:0004121!1.61e-10!102;UBERON:0000924!1.61e-10!102;UBERON:0006601!1.61e-10!102;UBERON:0002346!6.74e-10!71;UBERON:0003075!6.74e-10!71;UBERON:0007284!6.74e-10!71;UBERON:0004684!1.84e-09!3;UBERON:0002275!1.84e-09!3;UBERON:0000033!3.89e-09!63;UBERON:0002038!6.85e-09!3;UBERON:0002308!6.85e-09!3;UBERON:0009663!6.85e-09!3;UBERON:0009661!6.85e-09!3;UBERON:0006331!6.85e-09!3;UBERON:0000125!6.85e-09!3;UBERON:0002020!7.72e-09!34;UBERON:0001948!7.97e-09!5;UBERON:0002315!7.97e-09!5;UBERON:0001896!3.73e-07!2;UBERON:0005290!3.73e-07!2;UBERON:0010096!3.73e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,3.19e-26,2;UBERON:0002298,3.19e-26,2;UBERON:0005290,3.19e-26,2;UBERON:0010096,3.19e-26,2;UBERON:0004684,3.41e-17,3;UBERON:0002275,3.41e-17,3;UBERON:0002259,1.16e-13,1;UBERON:0002314,1.16e-13,1;UBERON:0004061,1.16e-13,1;UBERON:0006777,1.16e-13,1;UBERON:0005882,1.16e-13,1;UBERON:0003076,3.36e-10,12;UBERON:0003057,3.36e-10,12;UBERON:0004733,1.96e-09,6;UBERON:0004732,1.96e-09,6;UBERON:0002028,1.96e-09,6;UBERON:0007277,1.96e-09,6;UBERON:0001017,1.47e-08,73;UBERON:0000073,1.59e-08,54;UBERON:0001016,2.47e-08,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,1.10115880999389,1.0214987046815,0.46081959976873,0,0,0,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3481157546434,0,0,0,0,2.0778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.64096361229084,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,1.10115880999389,1.0214987046815,0.46081959976873,0,0,0,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3481157546434,0,0,0,0,2.0778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.64096361229084,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@Oprm1 | |||
}} | }} |
Latest revision as of 23:28, 25 September 2015
Short description: | p9@Oprm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Oprm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 19bp_to_ENSMUST00000133486_5end |
EntrezGene: | Oprm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.41e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 3.19e-26 | 2 |
brainstem | 3.19e-26 | 2 |
myelencephalon | 3.19e-26 | 2 |
future myelencephalon | 3.19e-26 | 2 |
raphe nuclei | 3.41e-17 | 3 |
reticular formation | 3.41e-17 | 3 |
corpora quadrigemina | 1.16e-13 | 1 |
midbrain tectum | 1.16e-13 | 1 |
neural tube mantle layer | 1.16e-13 | 1 |
tectal plate | 1.16e-13 | 1 |
neural tube alar plate | 1.16e-13 | 1 |
posterior neural tube | 3.36e-10 | 12 |
chordal neural plate | 3.36e-10 | 12 |
segmental subdivision of hindbrain | 1.96e-09 | 6 |
segmental subdivision of nervous system | 1.96e-09 | 6 |
hindbrain | 1.96e-09 | 6 |
presumptive hindbrain | 1.96e-09 | 6 |
central nervous system | 1.47e-08 | 73 |
regional part of nervous system | 1.59e-08 | 54 |
nervous system | 2.47e-08 | 75 |