FFCP PHASE1:Hg19::chr7:64035038..64035062,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_uc003ttc.1_5end | |||
|cluster_id=chr7:64035038..64035062,+ | |||
|coexpression_cluster_id=C4691 | |||
|description=CAGE_peak_2_at_uc003ttc.1_5end | |||
|id=chr7:64035038..64035062,+ | |||
|ontology_enrichment_celltype=CL:0000095!2.44e-09!17;CL:0000123!2.44e-09!17;CL:1000497!4.31e-09!18;CL:0002518!4.31e-09!18;CL:1000449!6.76e-09!16;CL:1000507!8.98e-09!12;CL:1000494!8.98e-09!12;CL:0000128!2.32e-08!7;CL:0000126!2.32e-08!7;CL:0000127!2.32e-08!7;CL:0002453!2.32e-08!7;CL:0002681!6.99e-08!13;CL:0002584!6.99e-08!13;CL:0000243!2.35e-07!15;CL:0000125!2.35e-07!15;CL:0000030!2.35e-07!15;CL:0000339!2.35e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000095;7.69e-18;17!CL:0000128;1.41e-15;7!CL:0000126;1.41e-15;7!CL:0000127;1.41e-15;7!CL:0002603;2.08e-13;3!CL:0002319;4.59e-12;25!CL:0000243;5.06e-12;15!CL:0000125;5.06e-12;15!CL:1000497;1.01e-11;17!CL:0002518;1.01e-11;17!CL:0000123;1.10e-10;2!CL:0000242;1.10e-10;2!CL:1000449;5.27e-10;15!CL:0002681;6.97e-09;12!CL:0002584;6.97e-09;12!CL:1000507;2.66e-07;10!CL:1000494;2.66e-07;10!CL:0002540;4.16e-07;6!CL:0002605;4.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000095,6.45e-18,17;CL:0000123,6.45e-18,17;CL:0000128,9.17e-16,7;CL:0000126,9.17e-16,7;CL:0000127,9.17e-16,7;CL:0002453,9.17e-16,7;CL:0002603,1.30e-13,3;CL:0002319,4.07e-12,25;CL:0000243,4.35e-12,15;CL:0000125,4.35e-12,15;CL:0000030,4.35e-12,15;CL:0000339,4.35e-12,15;CL:1000497,1.28e-11,17;CL:0002518,1.28e-11,17;CL:0000242,1.11e-10,2;CL:1000449,7.29e-10,15;CL:0002681,9.44e-09,12;CL:0002584,9.44e-09,12;CL:0000333,1.36e-08,41;CL:0000066,2.61e-07,253;CL:0002540,2.96e-07,6;CL:1000507,3.17e-07,10;CL:1000494,3.17e-07,10;CL:0002605,3.95e-07,3;CL:0002618,6.96e-07,3;CL:0000133,9.93e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000339;5.06e-12;15!UBERON:0003056;5.82e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!1.83e-17!61;UBERON:0003075!2.10e-17!86;UBERON:0007284!2.10e-17!86;UBERON:0002346!1.10e-16!90;UBERON:0000153!2.15e-16!129;UBERON:0007811!2.15e-16!129;UBERON:0000033!6.93e-16!123;UBERON:0000955!4.23e-14!69;UBERON:0006238!4.23e-14!69;UBERON:0004121!6.12e-14!169;UBERON:0000924!1.18e-13!173;UBERON:0006601!1.18e-13!173;UBERON:0001893!1.84e-13!34;UBERON:0005743!7.23e-13!86;UBERON:0002791!8.44e-13!33;UBERON:0000119!1.41e-12!312;UBERON:0001869!2.06e-12!32;UBERON:0000064!2.23e-12!219;UBERON:0001017!2.28e-12!82;UBERON:0000073!6.03e-12!94;UBERON:0001016!6.03e-12!94;UBERON:0002616!1.11e-11!59;UBERON:0001049!1.48e-11!57;UBERON:0005068!1.48e-11!57;UBERON:0006241!1.48e-11!57;UBERON:0007135!1.48e-11!57;UBERON:0000483!2.04e-11!309;UBERON:0002020!4.19e-11!34;UBERON:0003528!4.19e-11!34;UBERON:0002780!1.02e-10!41;UBERON:0001890!1.02e-10!41;UBERON:0006240!1.02e-10!41;UBERON:0002104!1.63e-10!21;UBERON:0003080!2.78e-10!42;UBERON:0000970!1.42e-09!20;UBERON:0000475!4.32e-09!365;UBERON:0004211!6.76e-09!16;UBERON:0001285!6.76e-09!16;UBERON:0007684!6.76e-09!16;UBERON:0003220!6.76e-09!16;UBERON:0004208!6.76e-09!16;UBERON:0000019!8.82e-09!19;UBERON:0000047!8.82e-09!19;UBERON:0004088!8.82e-09!19;UBERON:0003072!8.82e-09!19;UBERON:0003071!8.82e-09!19;UBERON:0004128!8.82e-09!19;UBERON:0009773!8.98e-09!12;UBERON:0001231!8.98e-09!12;UBERON:0004810!8.98e-09!12;UBERON:0001032!1.40e-08!24;UBERON:0004456!1.40e-08!24;UBERON:0000481!1.41e-08!347;UBERON:0006555!3.72e-08!17;UBERON:0005103!3.72e-08!17;UBERON:0000083!3.72e-08!17;UBERON:0009201!3.72e-08!17;UBERON:0004819!3.72e-08!17;UBERON:0006553!3.72e-08!17;UBERON:0003074!3.72e-08!17;UBERON:0003060!3.72e-08!17;UBERON:0000956!5.34e-08!25;UBERON:0000203!5.34e-08!25;UBERON:0001225!6.99e-08!13;UBERON:0008987!6.99e-08!13;UBERON:0000020!9.66e-08!23;UBERON:0001801!1.03e-07!14;UBERON:0000477!1.05e-07!286;UBERON:0001456!1.49e-07!21;UBERON:0000080!1.68e-07!18;UBERON:0002120!1.68e-07!18;UBERON:0004875!1.68e-07!18;UBERON:0005721!1.68e-07!18;UBERON:0005754!1.68e-07!18;UBERON:0007297!1.68e-07!18;UBERON:0000025!3.30e-07!194;UBERON:0001851!4.28e-07!16;UBERON:0003887!9.09e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.27e-10;15!UBERON:0004819;5.27e-10;15!UBERON:0001285;5.27e-10;15!UBERON:0007684;5.27e-10;15!UBERON:0001225;6.97e-09;12!UBERON:0008987;6.97e-09;12!UBERON:0002113;4.99e-08;24!UBERON:0011143;4.99e-08;24!UBERON:0004732;5.27e-08;13!UBERON:0004211;2.66e-07;10!UBERON:0009773;2.66e-07;10!UBERON:0001231;2.66e-07;10!UBERON:0004810;2.66e-07;10!UBERON:0001851;4.76e-07;15!UBERON:0000353;4.76e-07;15!UBERON:0002037;6.22e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,7.29e-10,15;UBERON:0009773,7.29e-10,15;UBERON:0001231,7.29e-10,15;UBERON:0001285,7.29e-10,15;UBERON:0007684,7.29e-10,15;UBERON:0004208,7.29e-10,15;UBERON:0006555,3.29e-09,16;UBERON:0004819,3.29e-09,16;UBERON:0001225,9.44e-09,12;UBERON:0008987,9.44e-09,12;UBERON:0004732,4.31e-08,13;UBERON:0002113,2.82e-07,26;UBERON:0003918,2.82e-07,26;UBERON:0011143,2.82e-07,26;UBERON:0005095,2.82e-07,26;UBERON:0007687,2.82e-07,26;UBERON:0004810,3.17e-07,10;UBERON:0000966,3.92e-07,6;UBERON:0005388,3.92e-07,6;UBERON:0001802,3.92e-07,6;UBERON:0002037,4.95e-07,6;UBERON:0006215,4.95e-07,6;UBERON:0001851,6.03e-07,15;UBERON:0000353,6.03e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,1.09220686065086,0.527533956456907,0,0,0,0,0,0,1.60057375499824,1.22400414746552,1.25381888591235,2.57612388417951,2.46373965131192,0.627713197974014,0,0,0.0787107813136792,0,0,0.154816123316076,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0,0,0,0,0,0.756278537312543,0.886917589850256,1.49319135678314,0.261958150995425,0.364295288292542,0.741568885568859,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,1.7859945656816,0.673588117878509,1.57656072676651,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.49333509683432,0.622422070799533,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0.368502951935304,0,0,0,0,0,0.336672227908132,0.875829639103749,0.554128230968366,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.462942225792648,0.325808305310325,1.03993478527958,0,0.695582429850461,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.560655421726804,0.43596006883328,0.7333828582095,0,0,0,0,0,2.57207374262142,1.41849132023278,1.5985330740966,0,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0.197030760201927,0,0,0,0,0,0.670065061337395,0,0,0,0,0,0.500170521059677,0,0,0,0.157702415033935,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0.451199612907412,1.23224539367064,2.35304930753057,0,0.633309773357254,0,1.02056223165909,0.863663664408557,0,1.08378575017541,0.501689773854853,0.509752546090077,0.831076008928724,3.35812132083267,0,0,1.02580050046556,0.328014645699706,0,0,0,0,0,0,0,0,0.616194468458578,0.460511024178389,0.413509717453592,0.966782203814463,0,0.511359764496605,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0.316379424718726,0.38126038784765,0.767693373934002,0,0,0,0.359744915166629,0,0.353437207037059,0,0,0,0.975267478179181,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0.75894634753143,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11443384277478,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0.524759999977174,0,0,2.54253650292766,0,4.48166385213904,0,3.47249989866585,0.885741385813839,0.482385754501632,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77495773870551,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0.30607276163049,0.379119477770928,0,0,0,0,0,0,1.70765727617876,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0.677942222341597,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0.857974989309823,0,0.248505071130865,0,0,0,0.101998217636322,2.02265412931063,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.485996453264197,0,0.0788057072991982,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,1.14681839138014,0,0.18628920882415,0.138348634936231,0,0,0,0,7.49335849291011,7.24605143054126,0,0,0,0,0,0.889811221596536,0,0,0,0.147855149989634,0,0,0.310525913752519,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0,0,1.20008329398946,0,0,0,0.385239660814607,0,0,1.13352962756136,0.231522474323834,0.97894681802587,0,0,0,0,0,1.35153952522458,2.30617366729152,0,0.607719912354764,0.138258436151731,0,0,0,0,0,0,0,0,0,2.27006381426734,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,0,1.00828678488687,0.414943514785307,0,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0.40341013740704,0,0,0,0,0.405225507710368,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.328863867814245,1.06374456795571,0,0,0.314231179832004,0,0,0,1.43325506366115,0,6.63657169277452,0,0,0,0,0,0,0,0,0.255640214277473,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,7.49196571898682,0,0.549702583727146,0.905777061400041,0.0771741581079447,0.218559560503957,0,0,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,15.6249767908085,0,2.95767606251747,2.40495664739004,1.10273879441814,0,0.378893491091197,0.267964130156178,0,0.103432995861895,0,0.476128862927481,0.129177819672012,0.248298857183432,0.672791175483681,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,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| |||
|short_description=p2@uc003ttc.1 | |||
}} |
Latest revision as of 11:03, 31 July 2015
Short description: | p2@uc003ttc.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc003ttc.1_5end |
Coexpression cluster: | C4691_teratocarcinoma_carcinoid_merkel_retinoblastoma_testicular_carcinosarcoma_small |
Association with transcript: | -10bp_to_uc003ttc.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron associated cell | 6.45e-18 | 17 |
neuron associated cell (sensu Vertebrata) | 6.45e-18 | 17 |
oligodendrocyte | 9.17e-16 | 7 |
macroglial cell | 9.17e-16 | 7 |
astrocyte | 9.17e-16 | 7 |
oligodendrocyte precursor cell | 9.17e-16 | 7 |
astrocyte of the cerebellum | 1.30e-13 | 3 |
neural cell | 4.07e-12 | 25 |
glial cell (sensu Vertebrata) | 4.35e-12 | 15 |
glial cell | 4.35e-12 | 15 |
glioblast | 4.35e-12 | 15 |
glioblast (sensu Vertebrata) | 4.35e-12 | 15 |
kidney cell | 1.28e-11 | 17 |
kidney epithelial cell | 1.28e-11 | 17 |
Merkel cell | 1.11e-10 | 2 |
epithelial cell of nephron | 7.29e-10 | 15 |
kidney cortical cell | 9.44e-09 | 12 |
renal cortical epithelial cell | 9.44e-09 | 12 |
migratory neural crest cell | 1.36e-08 | 41 |
epithelial cell | 2.61e-07 | 253 |
mesenchymal stem cell of the bone marrow | 2.96e-07 | 6 |
kidney tubule cell | 3.17e-07 | 10 |
nephron tubule epithelial cell | 3.17e-07 | 10 |
astrocyte of the cerebral cortex | 3.95e-07 | 3 |
endothelial cell of umbilical vein | 6.96e-07 | 3 |
neurectodermal cell | 9.93e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 7.29e-10 | 15 |
renal tubule | 7.29e-10 | 15 |
nephron tubule | 7.29e-10 | 15 |
nephron | 7.29e-10 | 15 |
uriniferous tubule | 7.29e-10 | 15 |
nephrogenic mesenchyme | 7.29e-10 | 15 |
excretory tube | 3.29e-09 | 16 |
kidney epithelium | 3.29e-09 | 16 |
cortex of kidney | 9.44e-09 | 12 |
renal parenchyma | 9.44e-09 | 12 |
segmental subdivision of nervous system | 4.31e-08 | 13 |
kidney | 2.82e-07 | 26 |
kidney mesenchyme | 2.82e-07 | 26 |
upper urinary tract | 2.82e-07 | 26 |
kidney rudiment | 2.82e-07 | 26 |
kidney field | 2.82e-07 | 26 |
nephron tubule epithelium | 3.17e-07 | 10 |
retina | 3.92e-07 | 6 |
photoreceptor array | 3.92e-07 | 6 |
posterior segment of eyeball | 3.92e-07 | 6 |
cerebellum | 4.95e-07 | 6 |
rhombic lip | 4.95e-07 | 6 |
cortex | 6.03e-07 | 15 |
parenchyma | 6.03e-07 | 15 |