FFCP PHASE1:Hg19::chr7:5111723..5111807,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100533952,57786,389458 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17680 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000498308,uc010kst.2_5end | |||
|cluster_id=chr7:5111723..5111807,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_RBAK_5end | |||
|id=chr7:5111723..5111807,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002149;4.27e-12;6!CL:0002255;4.27e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,3.96e-12,6;CL:0002255,3.96e-12,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.92e-13;10!UBERON:0005564;4.92e-13;10!UBERON:0005795;2.12e-12;10 | |||
|ontology_enrichment_disease=DOID:0050687!6.02e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3001;4.27e-12;6!DOID:6193;2.13e-09;1!DOID:3905;2.47e-08;9!DOID:299;1.65e-07;25!DOID:3908;4.10e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,3.96e-12,6;DOID:305,1.14e-11,106;DOID:0050687,8.09e-11,143;DOID:6193,2.04e-09,1;DOID:3905,2.56e-08,9;DOID:299,1.57e-07,25;DOID:3908,4.16e-07,5;DOID:14566,4.84e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.15e-10!57;UBERON:0005068!3.15e-10!57;UBERON:0006241!3.15e-10!57;UBERON:0007135!3.15e-10!57;UBERON:0003080!6.28e-10!42;UBERON:0003075!3.42e-09!86;UBERON:0007284!3.42e-09!86;UBERON:0002780!4.50e-09!41;UBERON:0001890!4.50e-09!41;UBERON:0006240!4.50e-09!41;UBERON:0002346!2.06e-08!90;UBERON:0003056!3.89e-08!61;UBERON:0002616!8.08e-08!59;UBERON:0001869!9.27e-08!32;UBERON:0002619!2.36e-07!22;UBERON:0000473!2.80e-07!8;UBERON:0000956!3.50e-07!25;UBERON:0000203!3.50e-07!25;UBERON:0002020!3.95e-07!34;UBERON:0003528!3.95e-07!34;UBERON:0001893!4.40e-07!34;UBERON:0001017!5.21e-07!82;UBERON:0005743!5.94e-07!86;UBERON:0003135!8.30e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;8.33e-18;11!UBERON:0000473;3.01e-16;8!UBERON:0003101;2.57e-12;22!UBERON:0000079;2.57e-12;22!UBERON:0004175;6.99e-09;21!UBERON:0001301;8.82e-09;1!UBERON:0004913;8.82e-09;1!UBERON:0003703;8.82e-09;1!UBERON:0001174;8.82e-09;1!UBERON:0004914;8.82e-09;1!UBERON:0003133;4.40e-08;44!UBERON:0000995;2.35e-07;17!UBERON:0000058;2.65e-07;10!UBERON:0005156;5.23e-07;59!UBERON:0000990;5.23e-07;59!UBERON:0003975;5.93e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,7.51e-18,11;UBERON:0000473,3.07e-16,8;UBERON:0003101,2.40e-12,22;UBERON:0000079,2.40e-12,22;UBERON:0003133,9.14e-12,48;UBERON:0005156,1.71e-11,59;UBERON:0000990,1.71e-11,59;UBERON:0001301,6.72e-09,1;UBERON:0004913,7.85e-09,1;UBERON:0003703,7.85e-09,1;UBERON:0001174,7.85e-09,1;UBERON:0004914,7.85e-09,1;UBERON:0004175,1.76e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.296573126324121,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,78.5219557608787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.207328115540772,0,0.37872730027914,0.507983154337352,0.381988425558278,0,0,0.102827492703324,5.70651809903443,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.231046011313244,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0.459446800413919,0.507447609232169,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0.724999575434793,0,2.03402920234213,0,0,0.291604613383254,0,0,1.20596438625408,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0.794682894901893,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0.19566461893209,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,2.08271686002157,0.195984794828755,0,1.92199335066233,8.59930162358083,0,0,0,0.0969890164884194,0.264768380074501,0,0,0,0.0633107959558787,0.195551382734803,0.480952921509202,0,4.19600180122473,0,0.572682980829578,0.171594997861965,0,0.99402028452346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.364497339948148,0.335434687599266,0.0788057072991982,0,4.32961379729567,0,0,0,0,0,0,1.72844298240254,0,0,0,0,0.79318464064088,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.434674820589684,0.415045904808692,0,0.151649117541648,1.14186133417987,0,0,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0.406870733204662,0,0,0,0.398095888698616,0,0,0,0,5.00811559058989,0,0,0,0.231522474323834,6.11841761266169,0,0.308801447160972,0.219284049578707,0,0,0.337884881306145,0,0,0,0,0.194860308839388,0,0,0.655219697692825,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0.615349092722265,0.252071696221718,0,0,0,0,0,0,0.346576998451015,0,0,0.198916222116275,0,0.20170506870352,0,0,0,1.47856086217045,0.0675375846183947,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.271878931907327,0.131545547125698,1.41832609060762,0.444925607568277,0,0,0,0,0,3.34426181520935,0.142953088353313,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0,2.79185747097888,3.82215575590973,0,0,0,0,0,0,0,0,0.198950775161368,4.1622031772149,0.33883824611688,0,0.452888530700021,0.0771741581079447,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0.0679914901909147,0.436350690340377,0,0,0,0,0,0.98339014767326,0,0.509944148709909,3.47382626845229,0.0918948995348449,8.27334879664838,266.589460331766,365.771037663184,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0.569822880276821,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p2@RBAK | |||
}} |
Latest revision as of 23:18, 18 September 2015
Short description: | p2@RBAK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RBAK_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000498308, uc010kst.2_5end |
EntrezGene: | 100533952,57786,389458 |
HGNC: | 17680 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 3.96e-12 | 6 |
stromal cell of endometrium | 3.96e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 7.51e-18 | 11 |
testis | 3.07e-16 | 8 |
male organism | 2.40e-12 | 22 |
male reproductive system | 2.40e-12 | 22 |
reproductive organ | 9.14e-12 | 48 |
reproductive structure | 1.71e-11 | 59 |
reproductive system | 1.71e-11 | 59 |
epididymis | 6.72e-09 | 1 |
hepatopancreatic ampulla | 7.85e-09 | 1 |
extrahepatic bile duct | 7.85e-09 | 1 |
common bile duct | 7.85e-09 | 1 |
duodenal papilla | 7.85e-09 | 1 |
internal genitalia | 1.76e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 3.96e-12 | 6 |
carcinoma | 1.14e-11 | 106 |
cell type cancer | 8.09e-11 | 143 |
epithelioid sarcoma | 2.04e-09 | 1 |
lung carcinoma | 2.56e-08 | 9 |
adenocarcinoma | 1.57e-07 | 25 |
non-small cell lung carcinoma | 4.16e-07 | 5 |
disease of cellular proliferation | 4.84e-07 | 239 |