FFCP PHASE1:Hg19::chr7:47520822..47520831,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:47520822..47520831,- | |||
|coexpression_cluster_id=C602 | |||
|description=CAGE_peak_at_chr7:47520822..47520831,- | |||
|id=chr7:47520822..47520831,- | |||
|ontology_enrichment_celltype=CL:0002194!9.77e-43!63;CL:0000576!9.77e-43!63;CL:0000040!9.77e-43!63;CL:0000559!9.77e-43!63;CL:0002009!4.28e-41!65;CL:0000839!1.14e-39!70;CL:0000557!5.87e-39!71;CL:0000766!1.13e-35!76;CL:0000763!1.32e-29!112;CL:0000049!1.32e-29!112;CL:0002057!2.30e-29!42;CL:0002087!1.48e-28!119;CL:0000738!6.65e-28!140;CL:0000860!6.69e-27!45;CL:0002031!7.63e-27!124;CL:0002032!3.39e-25!165;CL:0000837!3.39e-25!165;CL:0000037!1.36e-23!172;CL:0000566!1.36e-23!172;CL:0000988!1.60e-21!182;CL:0000235!4.03e-09!10;CL:0000990!5.58e-09!8;CL:0000134!2.13e-08!358;CL:0002619!3.39e-08!3;CL:0002320!5.70e-08!365;CL:0000451!3.38e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.32e-46;39!CL:0000234;2.32e-46;39!CL:0000235;6.15e-38;6!CL:0000860;2.91e-31;33!CL:0002057;2.91e-31;33!CL:0000576;5.10e-23;48!CL:0002619;2.34e-18;3!CL:0000766;5.95e-18;69!CL:0000763;1.87e-08;100!CL:0000738;2.21e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,6.48e-54,59;CL:0000576,6.48e-54,59;CL:0000040,6.48e-54,59;CL:0000559,6.48e-54,59;CL:0002009,5.05e-52,61;CL:0000839,8.70e-48,66;CL:0000473,3.47e-47,48;CL:0000234,3.47e-47,48;CL:0000557,5.15e-47,67;CL:0000766,1.81e-43,72;CL:0000235,6.58e-38,6;CL:0002087,1.42e-30,115;CL:0000763,3.84e-30,108;CL:0000049,3.84e-30,108;CL:0002031,4.22e-29,120;CL:0000738,2.28e-27,136;CL:0000860,1.68e-25,42;CL:0002057,1.68e-25,42;CL:0002032,2.44e-22,161;CL:0000837,2.44e-22,161;CL:0000037,3.39e-21,168;CL:0000988,7.38e-20,177;CL:0002619,2.20e-18,3;CL:0000134,2.67e-07,354;CL:0002320,4.69e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.43e-20;42!CL:0000049;4.61e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;3.00e-07;1!DOID:0070004;3.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,4.61e-07,1;DOID:0070004,4.61e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.90e-35!80;UBERON:0001474!3.44e-32!86;UBERON:0002390!5.16e-32!102;UBERON:0003061!5.16e-32!102;UBERON:0002405!6.99e-32!115;UBERON:0002193!1.72e-31!112;UBERON:0004765!2.61e-27!101;UBERON:0001434!2.61e-27!101;UBERON:0002204!5.35e-13!167;UBERON:0003081!4.39e-11!216;UBERON:0002384!1.96e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.00e-07;1!UBERON:0000029;3.00e-07;1!UBERON:0001961;3.00e-07;1!UBERON:0001744;3.00e-07;1!UBERON:0001042;3.00e-07;1!UBERON:0001735;3.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.29e-45,93;UBERON:0002371,1.36e-44,76;UBERON:0001474,5.14e-41,82;UBERON:0002193,1.27e-38,108;UBERON:0004765,5.60e-37,90;UBERON:0002390,1.12e-36,98;UBERON:0003061,1.12e-36,98;UBERON:0001434,7.89e-33,100;UBERON:0002204,9.44e-18,167;UBERON:0003081,1.19e-16,203;UBERON:0000926,7.34e-09,315;UBERON:0004120,7.34e-09,315;UBERON:0006603,7.34e-09,315;UBERON:0000029,2.21e-07,1;UBERON:0002372,3.62e-07,1;UBERON:0001961,3.62e-07,1;UBERON:0001744,3.62e-07,1;UBERON:0001735,3.62e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,1.11957737119962,1.29557466407592,1.28787783817093,0,0,0,1.16214518452842,1.23350366406548,1.54853185447552,2.3015391385772,3.07392847834921,3.54723344832878,0.689491361473237,1.29096936716765,2.70852973188684,0,0.818718450173537,0.898893937780338,0.306083892370903,0,0.639337125799041,0.329851300186716,0.199463657621632,0.852449501065388,0.290209238628584,1.13477044938228,1.24564449799115,1.00499466102697,3.65038042894141,2.38907729175628,0,2.20966581592539,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.696518949197069,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18568910348575,4.44608103764552,3.86441021950693,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,2.00902836572851,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929015875628594,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0,3.45474491260183,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0,1.48849806543585,2.56895121467328,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55888247071511,0.930053882193542,0.327130788511688,0,0,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657887425858975,2.90060495881097,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.124149428591716,0,0.0636471582781649,0,0.217716747896961,0,1.14498490124799,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.61019034872821,0 | |||
|short_description=p@chr7:47520822..47520831,- | |||
}} |
Latest revision as of 10:31, 31 July 2015
Short description: | p@chr7:47520822..47520831, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:47520822..47520831, - |
Coexpression cluster: | C602_Macrophage_Monocytederived_CD14_Mast_Dendritic_lung_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 6.48e-54 | 59 |
monocyte | 6.48e-54 | 59 |
monoblast | 6.48e-54 | 59 |
promonocyte | 6.48e-54 | 59 |
macrophage dendritic cell progenitor | 5.05e-52 | 61 |
myeloid lineage restricted progenitor cell | 8.70e-48 | 66 |
defensive cell | 3.47e-47 | 48 |
phagocyte | 3.47e-47 | 48 |
granulocyte monocyte progenitor cell | 5.15e-47 | 67 |
myeloid leukocyte | 1.81e-43 | 72 |
macrophage | 6.58e-38 | 6 |
nongranular leukocyte | 1.42e-30 | 115 |
myeloid cell | 3.84e-30 | 108 |
common myeloid progenitor | 3.84e-30 | 108 |
hematopoietic lineage restricted progenitor cell | 4.22e-29 | 120 |
leukocyte | 2.28e-27 | 136 |
classical monocyte | 1.68e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-25 | 42 |
hematopoietic oligopotent progenitor cell | 2.44e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.44e-22 | 161 |
hematopoietic stem cell | 3.39e-21 | 168 |
hematopoietic cell | 7.38e-20 | 177 |
adult endothelial progenitor cell | 2.20e-18 | 3 |
mesenchymal cell | 2.67e-07 | 354 |
connective tissue cell | 4.69e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.29e-45 | 93 |
bone marrow | 1.36e-44 | 76 |
bone element | 5.14e-41 | 82 |
hemolymphoid system | 1.27e-38 | 108 |
skeletal element | 5.60e-37 | 90 |
hematopoietic system | 1.12e-36 | 98 |
blood island | 1.12e-36 | 98 |
skeletal system | 7.89e-33 | 100 |
musculoskeletal system | 9.44e-18 | 167 |
lateral plate mesoderm | 1.19e-16 | 203 |
mesoderm | 7.34e-09 | 315 |
mesoderm-derived structure | 7.34e-09 | 315 |
presumptive mesoderm | 7.34e-09 | 315 |
lymph node | 2.21e-07 | 1 |
tonsil | 3.62e-07 | 1 |
mucosa-associated lymphoid tissue | 3.62e-07 | 1 |
lymphoid tissue | 3.62e-07 | 1 |
tonsillar ring | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.61e-07 | 1 |
myeloma | 4.61e-07 | 1 |