FFCP PHASE1:Hg19::chr7:46269080..46269084,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:46269080..46269084,+ | |||
|coexpression_cluster_id=C2576 | |||
|description=CAGE_peak_at_chr7:46269080..46269084,+ | |||
|id=chr7:46269080..46269084,+ | |||
|ontology_enrichment_celltype=CL:0000197!2.24e-17!6;CL:0000098!2.24e-17!6;CL:0002167!2.24e-17!6;CL:0002549!3.83e-13!2;CL:0000057!1.03e-07!75;CL:0000864!1.61e-07!1;CL:0000091!1.61e-07!1;CL:0000342!1.83e-07!1;CL:0002565!1.83e-07!1;CL:1000306!5.55e-07!4;CL:0002547!5.55e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000197;1.21e-74;6!CL:0000098;1.21e-74;6!CL:0002167;1.21e-74;6!CL:0000075;2.40e-26;27!CL:0000710;6.25e-23;20!CL:0002077;2.53e-12;34!CL:0002580;6.73e-11;3!CL:0000306;1.89e-08;4!CL:0002222;1.89e-08;4!CL:0002224;1.89e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.21e-74,6;CL:0000098,1.21e-74,6;CL:0002167,1.21e-74,6;CL:0000075,2.34e-26,27;CL:0000710,6.25e-23,20;CL:0002077,9.81e-14,34;CL:0002580,6.73e-11,3;CL:0000306,1.82e-08,4;CL:0002222,1.82e-08,4;CL:0002224,1.82e-08,4;CL:0000133,7.27e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3369!1.42e-07!1;DOID:3571!1.61e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003947!3.83e-13!2;UBERON:0005629!3.83e-13!2;UBERON:0005358!3.83e-13!2;UBERON:0001886!3.83e-13!2;UBERON:0004086!3.83e-13!2;UBERON:0005282!3.83e-13!2;UBERON:0005281!3.83e-13!2;UBERON:0002300!4.68e-09!3;UBERON:0002506!1.83e-07!1;UBERON:0001769!1.83e-07!1;UBERON:0000415!5.55e-07!4;UBERON:0007240!5.55e-07!4;UBERON:0005742!5.55e-07!4;UBERON:0005734!5.55e-07!4;UBERON:0004664!5.55e-07!4;UBERON:0004663!5.55e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.89e-08;4!UBERON:0005389;1.89e-08;4!UBERON:0000484;1.89e-08;4!UBERON:0000965;1.89e-08;4!UBERON:0001803;1.89e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.82e-08,4;UBERON:0005389,1.82e-08,4;UBERON:0000484,1.82e-08,4;UBERON:0002546,1.82e-08,4;UBERON:0000965,1.82e-08,4;UBERON:0001803,1.82e-08,4;UBERON:0003073,1.82e-08,4;UBERON:0005426,1.82e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.794455084879313,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36286865137773,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,2.46558257895225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87173775377726,1.78428988797162,1.10391690523754,1.87426263988341,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,4.29693525206575,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687743287091848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:46269080..46269084,+ | |||
}} |
Latest revision as of 10:27, 31 July 2015
Short description: | p@chr7:46269080..46269084, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:46269080..46269084, + |
Coexpression cluster: | C2576_Lens_Preadipocyte_Olfactory_Fibroblast_Cardiac_Smooth_Aortic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.21e-74 | 6 |
sensory epithelial cell | 1.21e-74 | 6 |
olfactory epithelial cell | 1.21e-74 | 6 |
columnar/cuboidal epithelial cell | 2.34e-26 | 27 |
neurecto-epithelial cell | 6.25e-23 | 20 |
ecto-epithelial cell | 9.81e-14 | 34 |
preadipocyte of the breast | 6.73e-11 | 3 |
crystallin accumulating cell | 1.82e-08 | 4 |
vertebrate lens cell | 1.82e-08 | 4 |
lens epithelial cell | 1.82e-08 | 4 |
neurectodermal cell | 7.27e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.82e-08 | 4 |
transparent eye structure | 1.82e-08 | 4 |
simple cuboidal epithelium | 1.82e-08 | 4 |
cranial placode | 1.82e-08 | 4 |
lens of camera-type eye | 1.82e-08 | 4 |
epithelium of lens | 1.82e-08 | 4 |
lens placode | 1.82e-08 | 4 |
lens vesicle | 1.82e-08 | 4 |