FFCP PHASE1:Mm9::chr3:121656103..121656116,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=214137|HGNC=|MCL_coexpression_id=0|UniProt=Q8CGF1|association_with_transcript=-30bp_to_ENSMUST00000037958_5end|description=CAGE_peak_5_at_Arhgap29_5end|id=chr3:121656103..121656116,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.07e-10,14;UBERON:0003135,1.32e-09,15;UBERON:0003101,4.76e-09,16;UBERON:0000079,4.76e-09,16;UBERON:0004176,1.48e-08,17;UBERON:0009196,1.48e-08,17;UBERON:0009117,1.48e-08,17;UBERON:0000991,4.05e-08,18;UBERON:0005564,4.05e-08,18;UBERON:0002323,7.41e-07,37;UBERON:0004458,7.41e-07,37|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0.279182999001381,0,0,0,0.284743361598206,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.301445281105245,0,0.125666591329675,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0.255715457330331,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0.414251545071004,0,0.36012412292203,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0.292399974850665,0.658650345873152,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,1.29327233116623,0,0.325929952884052,0,0,0.502518772325447,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0,0,0,12.4012446510522,0.299033092087958,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0.5208175393758,0.524296722128554,2.41584120826006,6.04863013141517,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0.760437899670719,0.188626341386076,0.0936415074698824,0,0,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0.644613162144895,0,0,0|short_description=p5@Arhgap29}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=214137 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CGF1 | |||
|association_with_transcript=-30bp_to_ENSMUST00000037958_5end | |||
|cluster_id=chr3:121656103..121656116,+ | |||
|description=CAGE_peak_5_at_Arhgap29_5end | |||
|id=chr3:121656103..121656116,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.07e-10,14;UBERON:0003135,1.32e-09,15;UBERON:0003101,4.76e-09,16;UBERON:0000079,4.76e-09,16;UBERON:0004176,1.48e-08,17;UBERON:0009196,1.48e-08,17;UBERON:0009117,1.48e-08,17;UBERON:0000991,4.05e-08,18;UBERON:0005564,4.05e-08,18;UBERON:0002323,7.41e-07,37;UBERON:0004458,7.41e-07,37 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0.279182999001381,0,0,0,0.284743361598206,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.301445281105245,0,0.125666591329675,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0.255715457330331,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0.414251545071004,0,0.36012412292203,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0.292399974850665,0.658650345873152,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,1.29327233116623,0,0.325929952884052,0,0,0.502518772325447,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0,0,0,12.4012446510522,0.299033092087958,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0.5208175393758,0.524296722128554,2.41584120826006,6.04863013141517,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0.760437899670719,0.188626341386076,0.0936415074698824,0,0,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0.644613162144895,0,0,0 | |||
|short_description=p5@Arhgap29 | |||
}} |
Latest revision as of 13:01, 1 October 2015
Short description: | p5@Arhgap29 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Arhgap29_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -30bp_to_ENSMUST00000037958_5end |
EntrezGene: | Arhgap29 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 3.07e-10 | 14 |
male reproductive organ | 1.32e-09 | 15 |
male organism | 4.76e-09 | 16 |
male reproductive system | 4.76e-09 | 16 |
external genitalia | 1.48e-08 | 17 |
indifferent external genitalia | 1.48e-08 | 17 |
indifferent gonad | 1.48e-08 | 17 |
gonad | 4.05e-08 | 18 |
gonad primordium | 4.05e-08 | 18 |
body cavity | 7.41e-07 | 37 |
body cavity or lining | 7.41e-07 | 37 |