FFCP PHASE1:Mm9::chr10:28863455..28863526,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:28863455..28863526,+
|short_description=p1@6330407J23Rik
|description=CAGE_peak_1_at_6330407J23Rik_5end
|association_with_transcript=-275bp_to_ENSMUST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67412 | |EntrezGene=67412 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q6NZL0 | |UniProt=Q6NZL0 | ||
|association_with_transcript=-275bp_to_ENSMUST00000092629,NM_026138,uc007est.1,uc007esu.1_5end | |||
|cluster_id=chr10:28863455..28863526,+ | |||
|description=CAGE_peak_1_at_6330407J23Rik_5end | |||
|id=chr10:28863455..28863526,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.38e-16!33;CL:0000047!1.38e-16!33;CL:0000031!1.38e-16!33;CL:0000404!1.38e-16!33;CL:0002319!1.96e-16!43;CL:0000221!2.16e-16!44;CL:0000133!2.16e-16!44;CL:0000117!9.53e-12!23;CL:0000337!9.53e-12!23;CL:0000393!1.71e-11!39;CL:0000211!1.71e-11!39;CL:0000055!1.83e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.94e-20,33;CL:0000047,2.94e-20,33;CL:0000031,2.94e-20,33;CL:0000404,2.94e-20,33;CL:0002319,4.05e-18,43;CL:0000221,2.25e-17,44;CL:0000133,2.25e-17,44;CL:0000393,3.94e-15,39;CL:0000211,3.94e-15,39;CL:0000117,2.61e-14,23;CL:0000337,2.61e-14,23;CL:0000107,4.56e-07,9;CL:0002609,4.90e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.87e-24!102;UBERON:0000924!1.87e-24!102;UBERON:0006601!1.87e-24!102;UBERON:0000073!9.59e-24!75;UBERON:0001016!9.59e-24!75;UBERON:0001017!5.03e-23!73;UBERON:0005743!5.03e-23!73;UBERON:0002346!1.43e-22!71;UBERON:0003075!1.43e-22!71;UBERON:0007284!1.43e-22!71;UBERON:0000033!6.34e-16!63;UBERON:0003056!3.88e-15!49;UBERON:0001049!4.39e-15!52;UBERON:0005068!4.39e-15!52;UBERON:0006241!4.39e-15!52;UBERON:0007135!4.39e-15!52;UBERON:0000955!1.36e-12!50;UBERON:0006238!1.36e-12!50;UBERON:0002616!3.13e-12!49;UBERON:0003080!3.04e-11!40;UBERON:0002780!4.48e-11!39;UBERON:0001890!4.48e-11!39;UBERON:0006240!4.48e-11!39;UBERON:0002020!9.25e-11!34;UBERON:0002791!1.54e-08!29;UBERON:0003528!1.54e-08!29;UBERON:0001893!1.54e-08!29;UBERON:0007811!3.09e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.26e-27,75;UBERON:0001017,6.15e-26,73;UBERON:0004121,1.85e-24,95;UBERON:0000924,1.85e-24,95;UBERON:0006601,1.85e-24,95;UBERON:0002346,9.79e-23,64;UBERON:0003075,9.79e-23,64;UBERON:0007284,9.79e-23,64;UBERON:0010371,3.71e-18,73;UBERON:0001049,7.26e-17,52;UBERON:0005068,7.26e-17,52;UBERON:0006241,7.26e-17,52;UBERON:0007135,7.26e-17,52;UBERON:0000073,1.98e-16,54;UBERON:0003056,2.03e-16,49;UBERON:0010314,3.07e-14,92;UBERON:0000955,3.17e-14,47;UBERON:0006238,3.17e-14,47;UBERON:0002616,8.71e-14,46;UBERON:0003080,6.77e-13,40;UBERON:0002780,1.09e-12,39;UBERON:0001890,1.09e-12,39;UBERON:0006240,1.09e-12,39;UBERON:0002020,2.82e-12,34;UBERON:0003528,1.38e-09,29;UBERON:0002791,1.38e-09,29;UBERON:0001893,1.38e-09,29;UBERON:0000010,1.25e-07,11;UBERON:0002410,4.56e-07,9 | |||
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| ||
|short_description=p1@6330407J23Rik | |||
}} | }} |
Latest revision as of 22:41, 25 September 2015
Short description: | p1@6330407J23Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_6330407J23Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -275bp_to_ENSMUST00000092629, NM_026138, uc007est.1, uc007esu.1_5end |
EntrezGene: | 6330407J23Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.94e-20 | 33 |
neuronal stem cell | 2.94e-20 | 33 |
neuroblast | 2.94e-20 | 33 |
electrically signaling cell | 2.94e-20 | 33 |
neural cell | 4.05e-18 | 43 |
ectodermal cell | 2.25e-17 | 44 |
neurectodermal cell | 2.25e-17 | 44 |
electrically responsive cell | 3.94e-15 | 39 |
electrically active cell | 3.94e-15 | 39 |
CNS neuron (sensu Vertebrata) | 2.61e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.61e-14 | 23 |
autonomic neuron | 4.56e-07 | 9 |
neuron of cerebral cortex | 4.90e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.26e-27 | 75 |
central nervous system | 6.15e-26 | 73 |
ectoderm-derived structure | 1.85e-24 | 95 |
ectoderm | 1.85e-24 | 95 |
presumptive ectoderm | 1.85e-24 | 95 |
neurectoderm | 9.79e-23 | 64 |
neural plate | 9.79e-23 | 64 |
presumptive neural plate | 9.79e-23 | 64 |
ecto-epithelium | 3.71e-18 | 73 |
neural tube | 7.26e-17 | 52 |
neural rod | 7.26e-17 | 52 |
future spinal cord | 7.26e-17 | 52 |
neural keel | 7.26e-17 | 52 |
regional part of nervous system | 1.98e-16 | 54 |
pre-chordal neural plate | 2.03e-16 | 49 |
structure with developmental contribution from neural crest | 3.07e-14 | 92 |
brain | 3.17e-14 | 47 |
future brain | 3.17e-14 | 47 |
regional part of brain | 8.71e-14 | 46 |
anterior neural tube | 6.77e-13 | 40 |
regional part of forebrain | 1.09e-12 | 39 |
forebrain | 1.09e-12 | 39 |
future forebrain | 1.09e-12 | 39 |
gray matter | 2.82e-12 | 34 |
brain grey matter | 1.38e-09 | 29 |
regional part of telencephalon | 1.38e-09 | 29 |
telencephalon | 1.38e-09 | 29 |
peripheral nervous system | 1.25e-07 | 11 |
autonomic nervous system | 4.56e-07 | 9 |