FFCP PHASE1:Hg19::chr7:36561860..36561869,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:36561860..36561869,- | |||
|coexpression_cluster_id=C586 | |||
|description=CAGE_peak_at_chr7:36561860..36561869,- | |||
|id=chr7:36561860..36561869,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.74e-88;3!UBERON:0006238;2.47e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!6.14e-43!69;UBERON:0006238!6.14e-43!69;UBERON:0001049!1.53e-41!57;UBERON:0005068!1.53e-41!57;UBERON:0006241!1.53e-41!57;UBERON:0007135!1.53e-41!57;UBERON:0002616!4.40e-40!59;UBERON:0001017!6.34e-36!82;UBERON:0005743!3.50e-34!86;UBERON:0000073!8.73e-31!94;UBERON:0001016!8.73e-31!94;UBERON:0003075!6.12e-27!86;UBERON:0007284!6.12e-27!86;UBERON:0002780!7.31e-27!41;UBERON:0001890!7.31e-27!41;UBERON:0006240!7.31e-27!41;UBERON:0003080!3.34e-26!42;UBERON:0002346!1.18e-25!90;UBERON:0009663!2.38e-23!7;UBERON:0000033!2.46e-23!123;UBERON:0000369!2.73e-23!4;UBERON:0002435!2.73e-23!4;UBERON:0000204!2.73e-23!4;UBERON:0010082!2.73e-23!4;UBERON:0001869!4.83e-23!32;UBERON:0007023!1.50e-22!115;UBERON:0000153!3.76e-22!129;UBERON:0007811!3.76e-22!129;UBERON:0001893!1.16e-21!34;UBERON:0004733!4.46e-21!12;UBERON:0002028!4.46e-21!12;UBERON:0007277!4.46e-21!12;UBERON:0004732!1.87e-19!13;UBERON:0002680!1.92e-18!9;UBERON:0001895!1.92e-18!9;UBERON:0010092!1.92e-18!9;UBERON:0002308!3.14e-18!9;UBERON:0002420!3.14e-18!9;UBERON:0000125!3.14e-18!9;UBERON:0007245!3.14e-18!9;UBERON:0010009!3.14e-18!9;UBERON:0010011!3.14e-18!9;UBERON:0000454!3.14e-18!9;UBERON:0002791!1.03e-17!33;UBERON:0003056!1.08e-17!61;UBERON:0002020!3.49e-17!34;UBERON:0003528!3.49e-17!34;UBERON:0003076!7.46e-17!15;UBERON:0003057!7.46e-17!15;UBERON:0004121!2.93e-16!169;UBERON:0002037!5.00e-16!6;UBERON:0006215!5.00e-16!6;UBERON:0000924!7.87e-16!173;UBERON:0006601!7.87e-16!173;UBERON:0005383!1.85e-14!3;UBERON:0005382!1.85e-14!3;UBERON:0001882!1.97e-11!1;UBERON:0005403!1.97e-11!1;UBERON:0002022!2.18e-11!1;UBERON:0001874!2.68e-11!1;UBERON:0007190!4.91e-11!1;UBERON:0000025!1.12e-10!194;UBERON:0004111!4.15e-08!241;UBERON:0001950!1.18e-07!20;UBERON:0002619!5.31e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.22e-44;6!UBERON:0002680;3.09e-30;9!UBERON:0001895;3.09e-30;9!UBERON:0004733;5.13e-23;12!UBERON:0002028;5.13e-23;12!UBERON:0004732;2.40e-21;13!UBERON:0001016;1.53e-07;83!UBERON:0001017;7.36e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.52e-44,6;UBERON:0006215,1.52e-44,6;UBERON:0002680,3.59e-30,9;UBERON:0001895,3.59e-30,9;UBERON:0010092,3.59e-30,9;UBERON:0004733,5.74e-23,12;UBERON:0002028,5.74e-23,12;UBERON:0007277,5.74e-23,12;UBERON:0004732,2.66e-21,13;UBERON:0003076,1.24e-18,15;UBERON:0003057,1.24e-18,15;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.844175070377856,1.52581736317083,1.87984741883082,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.543757863814654,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:36561860..36561869,- | |||
}} |
Latest revision as of 09:42, 31 July 2015
Short description: | p@chr7:36561860..36561869, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:36561860..36561869, - |
Coexpression cluster: | C586_cerebellum_brain_occipital_middle_parietal_medial_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.52e-44 | 6 |
rhombic lip | 1.52e-44 | 6 |
regional part of metencephalon | 3.59e-30 | 9 |
metencephalon | 3.59e-30 | 9 |
future metencephalon | 3.59e-30 | 9 |
segmental subdivision of hindbrain | 5.74e-23 | 12 |
hindbrain | 5.74e-23 | 12 |
presumptive hindbrain | 5.74e-23 | 12 |
segmental subdivision of nervous system | 2.66e-21 | 13 |
posterior neural tube | 1.24e-18 | 15 |
chordal neural plate | 1.24e-18 | 15 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
nervous system | 1.68e-07 | 89 |