Personal tools

FFCP PHASE1:Mm9::chr2:91476551..91476596,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=14061|HGNC=|MCL_coexpression_id=8|UniProt=P19221,Q3TJ94|association_with_transcript=0bp_to_ENSMUST00000028681,ENSMUST00000111335,ENSMUST00000153182,NM_010168,uc008kwg.1_5end|description=CAGE_peak_1_at_F2_5end|id=chr2:91476551..91476596,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.30e-16!22;UBERON:0007499!2.30e-16!22;UBERON:0006925!2.30e-16!22;UBERON:0009497!2.30e-16!22;UBERON:0000015!2.30e-16!22;UBERON:0002423!2.30e-16!22;UBERON:0006235!2.30e-16!22;UBERON:0008835!2.30e-16!22;UBERON:0003894!2.30e-16!22;UBERON:0004161!2.30e-16!22;UBERON:0008836!2.30e-16!22;UBERON:0005172!7.04e-16!49;UBERON:0005173!7.04e-16!49;UBERON:0002417!7.04e-16!49;UBERON:0000916!7.04e-16!49;UBERON:0005177!2.16e-15!85;UBERON:0009854!4.62e-15!23;UBERON:0009856!4.62e-15!23;UBERON:0009569!1.88e-13!66;UBERON:0002365!8.37e-13!25;UBERON:0002330!8.37e-13!25;UBERON:0002100!8.64e-10!98;UBERON:0004119!1.05e-09!130;UBERON:0000925!1.05e-09!130;UBERON:0006595!1.05e-09!130;UBERON:0001041!1.08e-09!92;UBERON:0000077!1.25e-09!97;UBERON:0000466!3.11e-09!79;UBERON:0001007!4.06e-09!128;UBERON:0001555!4.06e-09!128;UBERON:0007026!4.06e-09!128;UBERON:0004921!4.21e-09!126;UBERON:0004185!4.21e-09!126;UBERON:0003104!7.33e-08!131;UBERON:0009142!7.33e-08!131;UBERON:0000949!1.86e-07!72;UBERON:0005256!6.62e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.21e-20,22;UBERON:0007499,8.21e-20,22;UBERON:0006925,8.21e-20,22;UBERON:0009497,8.21e-20,22;UBERON:0000015,8.21e-20,22;UBERON:0002423,8.21e-20,22;UBERON:0006235,8.21e-20,22;UBERON:0008835,8.21e-20,22;UBERON:0003894,8.21e-20,22;UBERON:0004161,8.21e-20,22;UBERON:0008836,8.21e-20,22;UBERON:0009854,1.70e-18,23;UBERON:0009856,1.70e-18,23;UBERON:0002365,3.40e-16,25;UBERON:0002330,3.40e-16,25;UBERON:0005172,8.27e-15,49;UBERON:0005173,8.27e-15,49;UBERON:0002417,8.27e-15,49;UBERON:0000916,8.27e-15,49;UBERON:0005177,8.88e-13,79;UBERON:0005256,5.90e-11,45;UBERON:0009569,2.13e-09,66;UBERON:0002100,3.38e-09,90;UBERON:0000949,2.59e-08,72;UBERON:0003104,3.92e-08,61;UBERON:0009142,3.92e-08,61;UBERON:0003914,5.71e-07,47|phase1_expression=0,0,0,0,0,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0.159992422793407,0.22940928106717,0,1.29228598847722,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372798891650601,0.151452386666368,0,12.4641730141721,2460.81228816677,3306.70059582079,3487.56202436357,4244.98933518562,3542.99662316573,742.38920481644,0,0,0,0,0,0,0,0,0,0,1158.16709199043,0,9.79718117827843,14.9197381018877,37.7537193107055,82.3297325204129,51.3964204284443,46.9178941471462,21.9916534826932,1181.83914073804,2.16899035379867,0,0.323533699894818,0.220841518460394,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,2.74966282395854,0,0,0,0,0,0,34.5114032843788,0,0,0,0,0,1.89106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,1.86413195281952,4.22146907965973,0,0,0.787056926989615,0.771335564436891,0.232533944750408,0,0.116765342367169,0.493679549740441,0,0,0,0.439100230582101,1.20785776884335,0,0,0.660837565967596,0.528901133327089,1.49301775374664,5.34144345279009,3.09281907173024,0.80673409849337,1.11189021922435,20.9248188723815,1.42358718463353,4.11747386810027,16.8394589896181,8.95304124185179,2.9244613067868,0.898819408654221,0.216138049874694,0.398282546508734,0.758671603812327,6.740662243974,1.1270773567308,1.83286195060783,1.16371492300575,3.64706263429657,0.569128834118316,0.590440591918409,1.41298855057237,0.493588655687202,3390.52869599572,104.611881283991,159.409345036808,211.145523529378,455.015252274412,837.608275820144,1619.16579147805,2199.7246669489,1469.7558307157,1980.13691191244,2226.96951910872,2866.97386083815,3174.98332394065,3191.33412286176,2450.74806612284,3534.86368102939,0.554259570499814,3.7898282354097,0.814824882210129,0.509235257325564,0.234690248288502,0.167506257441816,19.9956658344252,3.31727201358258,0.157635144106191,0,0.478364305972461,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,5.04813151066011,0,0.215423397732799,0,1.11399337041197,4.81230102341015,1.21443210502468,1.75353514746787,1.18586333383957,0,0.141940085208269,56.0906651551854,0.977321756121456,0,1.32745138339963,4.85561272309963,3.62788268357701,6.97838795096823,12.6979813938732,23.9799415396263,17.8315522286073,17.8131527443978,23.1723295950069,6.95280867458795,14.7586052004998,3.09406629744561,0,0,0.129358683782755,0,0,0,0,0,12.4376005273766,49.7805366529977,0,0,0.161464426695906,0,0.119372344003136,0.164140899745061,1.7488850197791,0.18542530201051,0.170870880797853,3.92135049130123,3.33350149265481,0.188368457004691,0.683471138605126,0.915112692826091,0,0,0,7.63736494412091,4.11236791655476,7.72613975082025,6.58832579012988,5.22720740036172,26.6402327770337,62.1724636834023,248.208327543184,5.23511883968059,0.648074866458964,0,0,0,0,0,1.03327858782185,0,0.234714477291508,45.9621478499144,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0,0.100826185136841,0,0.384847366561318,0.116876902181569,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,11.1726964552289,29.5369137954652,82.4131770861517,45.0668299650162,70.5959072448054,143.571386159843,148.757311326482,171.049938712438,155.914179658263,162.480231229644,143.73327213619,119.018355994221,118.062381034579,116.191953697206,117.168248055636,118.202012463753,111.501529428022,117.444481728942,141.752560089425,145.376563011416,120.861023994509,124.702127342449,137.93374938408,134.388195233092,136.652591745058,143.598458705126,138.900807639181,129.013908153569,184.615807375396,134.294840516565,117.909865403549,146.504713454749,123.484662425215,155.675635061781,0.249810577937946,196.736482702588,197.03675656229,3.06061331310149,26.0297874561028,6.4922993973718|short_description=p1@F2}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14061
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=P19221,Q3TJ94
|association_with_transcript=0bp_to_ENSMUST00000028681,ENSMUST00000111335,ENSMUST00000153182,NM_010168,uc008kwg.1_5end
|cluster_id=chr2:91476551..91476596,-
|description=CAGE_peak_1_at_F2_5end
|id=chr2:91476551..91476596,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!2.30e-16!22;UBERON:0007499!2.30e-16!22;UBERON:0006925!2.30e-16!22;UBERON:0009497!2.30e-16!22;UBERON:0000015!2.30e-16!22;UBERON:0002423!2.30e-16!22;UBERON:0006235!2.30e-16!22;UBERON:0008835!2.30e-16!22;UBERON:0003894!2.30e-16!22;UBERON:0004161!2.30e-16!22;UBERON:0008836!2.30e-16!22;UBERON:0005172!7.04e-16!49;UBERON:0005173!7.04e-16!49;UBERON:0002417!7.04e-16!49;UBERON:0000916!7.04e-16!49;UBERON:0005177!2.16e-15!85;UBERON:0009854!4.62e-15!23;UBERON:0009856!4.62e-15!23;UBERON:0009569!1.88e-13!66;UBERON:0002365!8.37e-13!25;UBERON:0002330!8.37e-13!25;UBERON:0002100!8.64e-10!98;UBERON:0004119!1.05e-09!130;UBERON:0000925!1.05e-09!130;UBERON:0006595!1.05e-09!130;UBERON:0001041!1.08e-09!92;UBERON:0000077!1.25e-09!97;UBERON:0000466!3.11e-09!79;UBERON:0001007!4.06e-09!128;UBERON:0001555!4.06e-09!128;UBERON:0007026!4.06e-09!128;UBERON:0004921!4.21e-09!126;UBERON:0004185!4.21e-09!126;UBERON:0003104!7.33e-08!131;UBERON:0009142!7.33e-08!131;UBERON:0000949!1.86e-07!72;UBERON:0005256!6.62e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.21e-20,22;UBERON:0007499,8.21e-20,22;UBERON:0006925,8.21e-20,22;UBERON:0009497,8.21e-20,22;UBERON:0000015,8.21e-20,22;UBERON:0002423,8.21e-20,22;UBERON:0006235,8.21e-20,22;UBERON:0008835,8.21e-20,22;UBERON:0003894,8.21e-20,22;UBERON:0004161,8.21e-20,22;UBERON:0008836,8.21e-20,22;UBERON:0009854,1.70e-18,23;UBERON:0009856,1.70e-18,23;UBERON:0002365,3.40e-16,25;UBERON:0002330,3.40e-16,25;UBERON:0005172,8.27e-15,49;UBERON:0005173,8.27e-15,49;UBERON:0002417,8.27e-15,49;UBERON:0000916,8.27e-15,49;UBERON:0005177,8.88e-13,79;UBERON:0005256,5.90e-11,45;UBERON:0009569,2.13e-09,66;UBERON:0002100,3.38e-09,90;UBERON:0000949,2.59e-08,72;UBERON:0003104,3.92e-08,61;UBERON:0009142,3.92e-08,61;UBERON:0003914,5.71e-07,47
|phase1_expression=0,0,0,0,0,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0.159992422793407,0.22940928106717,0,1.29228598847722,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372798891650601,0.151452386666368,0,12.4641730141721,2460.81228816677,3306.70059582079,3487.56202436357,4244.98933518562,3542.99662316573,742.38920481644,0,0,0,0,0,0,0,0,0,0,1158.16709199043,0,9.79718117827843,14.9197381018877,37.7537193107055,82.3297325204129,51.3964204284443,46.9178941471462,21.9916534826932,1181.83914073804,2.16899035379867,0,0.323533699894818,0.220841518460394,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,2.74966282395854,0,0,0,0,0,0,34.5114032843788,0,0,0,0,0,1.89106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,1.86413195281952,4.22146907965973,0,0,0.787056926989615,0.771335564436891,0.232533944750408,0,0.116765342367169,0.493679549740441,0,0,0,0.439100230582101,1.20785776884335,0,0,0.660837565967596,0.528901133327089,1.49301775374664,5.34144345279009,3.09281907173024,0.80673409849337,1.11189021922435,20.9248188723815,1.42358718463353,4.11747386810027,16.8394589896181,8.95304124185179,2.9244613067868,0.898819408654221,0.216138049874694,0.398282546508734,0.758671603812327,6.740662243974,1.1270773567308,1.83286195060783,1.16371492300575,3.64706263429657,0.569128834118316,0.590440591918409,1.41298855057237,0.493588655687202,3390.52869599572,104.611881283991,159.409345036808,211.145523529378,455.015252274412,837.608275820144,1619.16579147805,2199.7246669489,1469.7558307157,1980.13691191244,2226.96951910872,2866.97386083815,3174.98332394065,3191.33412286176,2450.74806612284,3534.86368102939,0.554259570499814,3.7898282354097,0.814824882210129,0.509235257325564,0.234690248288502,0.167506257441816,19.9956658344252,3.31727201358258,0.157635144106191,0,0.478364305972461,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,5.04813151066011,0,0.215423397732799,0,1.11399337041197,4.81230102341015,1.21443210502468,1.75353514746787,1.18586333383957,0,0.141940085208269,56.0906651551854,0.977321756121456,0,1.32745138339963,4.85561272309963,3.62788268357701,6.97838795096823,12.6979813938732,23.9799415396263,17.8315522286073,17.8131527443978,23.1723295950069,6.95280867458795,14.7586052004998,3.09406629744561,0,0,0.129358683782755,0,0,0,0,0,12.4376005273766,49.7805366529977,0,0,0.161464426695906,0,0.119372344003136,0.164140899745061,1.7488850197791,0.18542530201051,0.170870880797853,3.92135049130123,3.33350149265481,0.188368457004691,0.683471138605126,0.915112692826091,0,0,0,7.63736494412091,4.11236791655476,7.72613975082025,6.58832579012988,5.22720740036172,26.6402327770337,62.1724636834023,248.208327543184,5.23511883968059,0.648074866458964,0,0,0,0,0,1.03327858782185,0,0.234714477291508,45.9621478499144,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0,0.100826185136841,0,0.384847366561318,0.116876902181569,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,11.1726964552289,29.5369137954652,82.4131770861517,45.0668299650162,70.5959072448054,143.571386159843,148.757311326482,171.049938712438,155.914179658263,162.480231229644,143.73327213619,119.018355994221,118.062381034579,116.191953697206,117.168248055636,118.202012463753,111.501529428022,117.444481728942,141.752560089425,145.376563011416,120.861023994509,124.702127342449,137.93374938408,134.388195233092,136.652591745058,143.598458705126,138.900807639181,129.013908153569,184.615807375396,134.294840516565,117.909865403549,146.504713454749,123.484662425215,155.675635061781,0.249810577937946,196.736482702588,197.03675656229,3.06061331310149,26.0297874561028,6.4922993973718
|short_description=p1@F2
}}

Latest revision as of 03:03, 27 September 2015

Short description:p1@F2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_F2_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000028681, ENSMUST00000111335, ENSMUST00000153182, NM_010168, uc008kwg.1_5end
EntrezGene:F2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@F2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.46
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72460.81
Mouse hepatocyte, donor1.CNhs13078.11714-123C43306.70
Mouse hepatocyte, donor3.CNhs12615.11637-122C83487.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F44244.99
Mouse hepatocyte, donor8.CNhs13091.11824-124F63543.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7742.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61158.17
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D79.80
adrenal gland, embryo E14.CNhs11038.406-44C514.92
adrenal gland, embryo E16.CNhs11004.1254-43D637.75
adrenal gland, embryo E17.CNhs11043.1263-45I182.33
adrenal gland, embryo E18.CNhs11026.1262-18F551.40
adrenal gland, neonate N00.CNhs11191.1311-23C146.92
adrenal gland, neonate N25.CNhs11223.1377-27I321.99
amnion, adult pregnant day17.5.CNhs10488.583-22A81181.84
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D434.51
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F720.92
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B816.84
intestine, neonate N07.CNhs11095.720-20F28.95
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F86.74
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G73.65
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B23390.53
liver, embryo E12.CNhs10601.355-15F8104.61
liver, embryo E13.CNhs10524.378-3H6159.41
liver, embryo E14.CNhs10594.409-16E1211.15
liver, embryo E15.CNhs10520.433-16D7455.02
liver, embryo E16.CNhs10523.462-17F5837.61
liver, embryo E17.CNhs10510.481-18A31619.17
liver, embryo E18.CNhs10579.499-43G42199.72
liver, neonate N00.CNhs11117.641-24F41469.76
liver, neonate N03.CNhs11123.1345-25G21980.14
liver, neonate N06.CNhs11101.684-20A82226.97
liver, neonate N07.CNhs11103.716-20H22866.97
liver, neonate N10.CNhs11115.751-24B93174.98
liver, neonate N20.CNhs11220.823-25A33191.33
liver, neonate N25.CNhs11198.1368-26H12450.75
liver, neonate N30.CNhs11106.1382-42D13534.86
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I620.00
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H756.09
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E56.98
pancreas, embryo E17.CNhs10599.1558-45G312.70
pancreas, embryo E18.CNhs10580.1535-43I723.98
pancreas, neonate N00.CNhs11105.645-26G917.83
pancreas, neonate N01.CNhs11138.1531-43D717.81
pancreas, neonate N02.CNhs11139.1539-43D823.17
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I712.44
placenta, adult pregnant day17.CNhs10464.577-18G349.78
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G87.73
stomach, embryo E16.CNhs11022.459-17D46.59
stomach, embryo E17.CNhs11006.1035-18D55.23
stomach, embryo E18.CNhs10999.1286-20C626.64
stomach, neonate N03.CNhs11193.1340-24B862.17
stomach, neonate N07.CNhs11210.718-18A9248.21
stomach, neonate N25.CNhs11104.1355-25E45.24
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I445.96
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H229.54
whole body, embryo E14.5.CNhs10578.420-27D282.41
whole body, embryo E14.CNhs10519.395-14B145.07
whole body, embryo E16.CNhs10514.453-14F270.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5143.57
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5148.76
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5171.05
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5155.91
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5162.48
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5143.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5119.02
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5118.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5116.19
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5117.17
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5118.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5111.50
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5117.44
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5141.75
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5145.38
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5120.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5124.70
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5137.93
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5134.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5136.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5143.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5138.90
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5129.01
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5184.62
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5134.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5117.91
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5146.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5123.48
whole body, embryo E17.5.CNhs10513.490-9F9155.68
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B3196.74
whole body, neonate N00.CNhs10525.657-19C2197.04
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D126.03
whole body, neonate N10.CNhs10518.761-6B46.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver8.21e-2022
epithelial sac8.21e-2022
digestive gland8.21e-2022
epithelium of foregut-midgut junction8.21e-2022
anatomical boundary8.21e-2022
hepatobiliary system8.21e-2022
foregut-midgut junction8.21e-2022
hepatic diverticulum8.21e-2022
liver primordium8.21e-2022
septum transversum8.21e-2022
liver bud8.21e-2022
digestive tract diverticulum1.70e-1823
sac1.70e-1823
exocrine gland3.40e-1625
exocrine system3.40e-1625
abdomen element8.27e-1549
abdominal segment element8.27e-1549
abdominal segment of trunk8.27e-1549
abdomen8.27e-1549
trunk region element8.88e-1379
trunk mesenchyme5.90e-1145
subdivision of trunk2.13e-0966
trunk3.38e-0990
endocrine system2.59e-0872
mesenchyme3.92e-0861
entire embryonic mesenchyme3.92e-0861
epithelial tube5.71e-0747
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:91476551..91476596,-&oldid=4289127"