FFCP PHASE1:Mm9::chr10:21713807..21713827,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:21713807..21713827,+
|short_description=p2@Sgk1
|description=CAGE_peak_2_at_Sgk1_5end
|association_with_transcript=111bp_to_ENSMUST00000092673,NM_00116185...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20393 | |EntrezGene=20393 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2547 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WVC6 | |UniProt=Q9WVC6 | ||
|association_with_transcript=111bp_to_ENSMUST00000092673,NM_001161850,uc007eow.2_5end | |||
|cluster_id=chr10:21713807..21713827,+ | |||
|description=CAGE_peak_2_at_Sgk1_5end | |||
|id=chr10:21713807..21713827,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.73e-10!98;UBERON:0000926!4.29e-09!193;UBERON:0004120!4.29e-09!193;UBERON:0006603!4.29e-09!193;UBERON:0003103!8.42e-09!43;UBERON:0003104!1.45e-08!131;UBERON:0009142!1.45e-08!131;UBERON:0004535!2.83e-08!23;UBERON:0001009!2.83e-08!23;UBERON:0005177!5.38e-08!85;UBERON:0009569!4.30e-07!66;UBERON:0004872!6.64e-07!33;UBERON:0005178!6.82e-07!17;UBERON:0005181!6.82e-07!17;UBERON:0002224!6.82e-07!17;UBERON:0000915!6.82e-07!17;UBERON:0008947!6.82e-07!17;UBERON:0003258!6.82e-07!17;UBERON:0007100!9.96e-07!18;UBERON:0000948!9.96e-07!18;UBERON:0005498!9.96e-07!18;UBERON:0004140!9.96e-07!18;UBERON:0009881!9.96e-07!18;UBERON:0004141!9.96e-07!18;UBERON:0003084!9.96e-07!18;UBERON:0007005!9.96e-07!18;UBERON:0004139!9.96e-07!18;UBERON:0004291!9.96e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,7.70e-12,90;UBERON:0005177,1.09e-09,79;UBERON:0003103,1.16e-08,43;UBERON:0004535,2.52e-08,23;UBERON:0001009,2.52e-08,23;UBERON:0009569,4.22e-07,66;UBERON:0005178,6.22e-07,17;UBERON:0005181,6.22e-07,17;UBERON:0002224,6.22e-07,17;UBERON:0000915,6.22e-07,17;UBERON:0008947,6.22e-07,17;UBERON:0003258,6.22e-07,17;UBERON:0004872,6.96e-07,33;UBERON:0007100,9.12e-07,18;UBERON:0000948,9.12e-07,18;UBERON:0005498,9.12e-07,18;UBERON:0004140,9.12e-07,18;UBERON:0009881,9.12e-07,18;UBERON:0004141,9.12e-07,18;UBERON:0003084,9.12e-07,18;UBERON:0007005,9.12e-07,18;UBERON:0004139,9.12e-07,18;UBERON:0004291,9.12e-07,18 | |||
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| ||
|short_description=p2@Sgk1 | |||
}} | }} |
Latest revision as of 21:30, 25 September 2015
Short description: | p2@Sgk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sgk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2547 |
Association with transcript: | 111bp_to_ENSMUST00000092673, NM_001161850, uc007eow.2_5end |
EntrezGene: | Sgk1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 7.70e-12 | 90 |
trunk region element | 1.09e-09 | 79 |
compound organ | 1.16e-08 | 43 |
cardiovascular system | 2.52e-08 | 23 |
circulatory system | 2.52e-08 | 23 |
subdivision of trunk | 4.22e-07 | 66 |
thoracic cavity element | 6.22e-07 | 17 |
thoracic segment organ | 6.22e-07 | 17 |
thoracic cavity | 6.22e-07 | 17 |
thoracic segment of trunk | 6.22e-07 | 17 |
respiratory primordium | 6.22e-07 | 17 |
endoderm of foregut | 6.22e-07 | 17 |
splanchnic layer of lateral plate mesoderm | 6.96e-07 | 33 |
primary circulatory organ | 9.12e-07 | 18 |
heart | 9.12e-07 | 18 |
primitive heart tube | 9.12e-07 | 18 |
primary heart field | 9.12e-07 | 18 |
anterior lateral plate mesoderm | 9.12e-07 | 18 |
heart tube | 9.12e-07 | 18 |
heart primordium | 9.12e-07 | 18 |
cardiac mesoderm | 9.12e-07 | 18 |
cardiogenic plate | 9.12e-07 | 18 |
heart rudiment | 9.12e-07 | 18 |