FFCP PHASE1:Hg19::chr7:2698048..2698063,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:2698048..2698063,+ | |||
|coexpression_cluster_id=C716 | |||
|description=CAGE_peak_at_chr7:2698048..2698063,+ | |||
|id=chr7:2698048..2698063,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.61e-16!248;CL:0000220!1.90e-16!246;CL:0000144!4.32e-11!625;CL:0002371!3.94e-10!591;CL:0000548!5.27e-10!679;CL:0000004!5.27e-10!679;CL:0000255!5.27e-10!679;CL:0000012!1.88e-09!682;CL:0000055!1.38e-08!180;CL:0000221!1.41e-08!71;CL:0000133!9.35e-08!59;CL:0000147!2.89e-07!14;CL:0000222!5.10e-07!119;CL:0000213!7.38e-07!57;CL:0000215!7.38e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.33e-12;6!CL:0000148;1.92e-10;10!CL:0002567;5.19e-10;3!CL:0000147;3.12e-07;14!CL:0002539;6.71e-07;10!CL:0000115;7.05e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,8.57e-13,6;CL:0000148,9.10e-11,10;CL:0000541,9.10e-11,10;CL:0002567,3.08e-10,3;CL:0002321,8.85e-09,250;CL:0000133,3.37e-08,59;CL:0000221,4.32e-08,72;CL:0000115,1.81e-07,36;CL:0000147,1.87e-07,14;CL:0002539,5.64e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!9.86e-11!659;UBERON:0000467!1.40e-10!625;UBERON:0000480!2.14e-10!626;UBERON:0000922!3.53e-09!612;UBERON:0002050!1.61e-08!605;UBERON:0005423!1.61e-08!605;UBERON:0000923!2.37e-08!604;UBERON:0005291!2.37e-08!604;UBERON:0006598!2.37e-08!604;UBERON:0002532!2.37e-08!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000947;2.12e-07;21!UBERON:0010191;2.12e-07;21!UBERON:0004237;6.71e-07;10!UBERON:0004695;6.71e-07;10!UBERON:0002111;6.71e-07;10!UBERON:0004178;6.71e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.56e-07,21;UBERON:0010191,1.56e-07,21;UBERON:0001637,3.04e-07,42;UBERON:0003509,3.04e-07,42;UBERON:0004572,3.04e-07,42;UBERON:0003081,4.72e-07,203;UBERON:0004237,5.64e-07,10;UBERON:0004695,5.64e-07,10;UBERON:0002111,5.64e-07,10;UBERON:0004178,5.64e-07,10;UBERON:0004573,6.44e-07,33;UBERON:0004571,6.44e-07,33 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0.140954404095971,1.0007329835313,0.446961094427288,0,0,1.26343974685366,0,0.491467873003018,2.09340350391728,0.218441372130172,0.527533956456907,0.247532705920093,0.331397375727916,1.34465029290355,3.01347264011988,1.46062018077475,0.487932798790507,0.492484232307152,1.42800483870977,0.940364164434263,0.286235987131057,1.23186982565596,0.627713197974014,0.305653622991805,0.164201178899891,0.0787107813136792,0,0,0.154816123316076,0.919421224478927,0.6024118375565,0.739508020333575,0,0,0,0,0.802177789880567,0.651032612147555,0.895661896959697,0.32389366601898,1.54545340580512,0.290796477559129,0,0,1.85943229524548,0.411167888021826,0.619412741790207,0.863077176966451,0.512321413058201,0.47296445977717,0,0,0,1.50593871634084,0.545812300115692,0.224723484445085,0.612167784741805,0.320929027076094,0,1.31940520074686,1.39624560335142,0.426224750532694,1.16083695451434,0.56738522469114,0,0.75374599577023,0,0.434377689410233,1.21079900526674,0,0,0.422510572623884,0.425208599930087,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.724232594804119,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.702678285545008,0.130979075497713,0.364295288292542,0.370784442784429,0,0.522389211897802,0.664789802594326,0,0,0,0.198762407366705,2.58070378531837,0.694281003215189,0,1.25849830862972,1.10047216776027,0.835979866147242,0,0.71153252537342,0,0,0,0.488124115096339,0.367663080345869,1.62028389576352,0.803697554556718,0,0,0,1.89853131913626,0.549605231791222,0,0,0,0,0.633152558322899,0,0.286836620748814,1.41867352879343,0,0,0.74000264525148,0,0.67355336034844,0.326923806226917,0.151357427644931,1.72852777344,0,0.936480230490962,0,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0,0.122834317311768,0.516628905878827,0,0.247266929278557,0,0.718618141816238,0.336672227908132,0.125118519871964,0,0.438977620880838,0.30648779579902,0,0.113432183160021,0,0,0.635795703478686,0.300091096084402,0.309157587715317,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.504867548488229,0.0920498986422993,0.323292113637624,0.355009592516614,0.403008392910561,0.169560592310488,0.193260853163297,0.545492241181669,0,0.121973706129595,0.265059536642971,0.580969714347592,0.621966330092223,0.252320850875628,0,3.12899064659632,1.92972281457866,0,0.464367928031979,0.721879481669586,0.236613600079688,0.168584690078102,0,0.330881918197182,0.217879444092406,0,0.134831308160164,0.392442930250692,0,1.4763109092493,0,0,1.47008711385542,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0,0.277765335475589,0,1.03993478527958,1.44331342025273,0.115930404975077,0.117408694235822,0.433099343283221,0.925971025153221,0.380508304469197,0,0,1.47730203652438,0.234004265139238,1.48631162288728,0,0.671928512795438,0.425325291727159,0.0895585227028483,0,0,4.92663237895944,0.528290604079356,0.207328115540772,0.144119953416961,0.12624243342638,2.28592419451809,5.72982638337417,12.8939191931052,1.71072446022705,1.95372236136315,0.300343057843917,2.28661146104463,0,0.43596006883328,0.2933531432838,0.129271715757778,0,1.690605505112,0.531876233169741,2.08014873822732,0,0,1.0656887160644,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0.199945982364114,3.64871341923571,4.52031382288914,6.32501818449095,0.239624855491583,0,0,0,0.61642896765115,0,0,0,0,0,1.01637849688985,0,1.54657762555539,0.837581326671744,1.27587750330633,0,0,0,0.36807447515742,0.500170521059677,0,0.415941723061614,1.42743191037729,0.473107245101804,0.117141414992713,0.902838299183157,4.5481500811197,0,0.664225598535437,0,0.347534457872331,0,0.343143423810856,0,0.215714200818617,0,0,0,0.604780586659361,0,0,0.841980283299221,0.512556597022804,0,0.321707842287215,1.48418066444991,0.462629081407967,1.06537035187876,0.246381468041427,2.07701771673448,0.232420756919918,0.362578348774867,1.20303882181971,0.0920809889358963,0.229628896329213,0.910455840033585,0.393373244878272,0.451199612907412,0.0770153371044148,0,2.92278449306521,0.633309773357254,3.4120015221269,0.850468526382578,0.431831832204279,6.16909010761157,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0.512900250232778,0.984043937099117,0.976135183992909,0,0.183138929636687,0.082509499920588,1.72279661398852,1.30012049207304,1.6068392984416,0.48335359146061,0,0.307007349452259,0.275673144969061,0.322260734604821,0.580066775656914,0.0852266274161009,0.534192213880424,0.330569830721956,0.192190067365106,0,0.30347334256665,1.39453664789186,1.5740617341532,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.190630193923825,0.511795582622668,0.42793898803392,0,3.13979456079692,0.539617372749944,0.54907405947211,0.117812402345686,0,0,0.421258456238981,0.48763373908959,0.243713489631284,2.11300293513511,0.545999645631943,0.56562172781485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| |||
|short_description=p@chr7:2698048..2698063,+ | |||
}} |
Latest revision as of 08:58, 31 July 2015
Short description: | p@chr7:2698048..2698063, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:2698048..2698063, + |
Coexpression cluster: | C716_Melanocyte_Monocytederived_melanoma_Macrophage_Renal_CD14_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 8.57e-13 | 6 |
melanocyte | 9.10e-11 | 10 |
melanoblast | 9.10e-11 | 10 |
light melanocyte | 3.08e-10 | 3 |
embryonic cell | 8.85e-09 | 250 |
neurectodermal cell | 3.37e-08 | 59 |
ectodermal cell | 4.32e-08 | 72 |
endothelial cell | 1.81e-07 | 36 |
pigment cell | 1.87e-07 | 14 |
aortic smooth muscle cell | 5.64e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
aorta | 1.56e-07 | 21 |
aortic system | 1.56e-07 | 21 |
artery | 3.04e-07 | 42 |
arterial blood vessel | 3.04e-07 | 42 |
arterial system | 3.04e-07 | 42 |
lateral plate mesoderm | 4.72e-07 | 203 |
blood vessel smooth muscle | 5.64e-07 | 10 |
arterial system smooth muscle | 5.64e-07 | 10 |
artery smooth muscle tissue | 5.64e-07 | 10 |
aorta smooth muscle tissue | 5.64e-07 | 10 |
systemic artery | 6.44e-07 | 33 |
systemic arterial system | 6.44e-07 | 33 |