FFCP PHASE1:Hg19::chr7:22766994..22767019,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3569 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6018 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=175bp_to_ENST00000485300_5end | |||
|cluster_id=chr7:22766994..22767019,+ | |||
|description=CAGE_peak_4_at_IL6_5end | |||
|id=chr7:22766994..22767019,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.56e-12!119;CL:0000055!2.36e-10!180;CL:0000359!9.62e-09!32;CL:0002139!2.74e-08!24;CL:0000548!3.04e-08!679;CL:0000004!3.04e-08!679;CL:0000255!3.04e-08!679;CL:0000057!3.30e-08!75;CL:0000012!3.61e-08!682;CL:0000192!1.11e-07!42;CL:0000514!1.11e-07!42;CL:0002334!1.34e-07!12;CL:0000144!2.45e-07!625;CL:0002078!3.99e-07!44;CL:0000071!4.02e-07!18;CL:0002546!4.02e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.91e-10;32!CL:0002334;1.69e-08;12!CL:0002494;2.00e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.64e-11,32;CL:0002494,9.73e-09,16;CL:0002334,9.74e-09,12;CL:0000057,1.32e-08,76;CL:0000222,2.76e-08,121;CL:0000192,1.15e-07,43;CL:0000514,1.15e-07,43;CL:0000048,1.37e-07,427;CL:0000723,3.66e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.03e-09!14;DOID:193!1.26e-07!29;DOID:120!2.66e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.93e-12;14!DOID:120;7.69e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.77e-12,14;DOID:120,5.88e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0003914!6.40e-20!118;UBERON:0004872!1.98e-18!84;UBERON:0000055!1.51e-17!69;UBERON:0001981!7.26e-17!60;UBERON:0007500!7.26e-17!60;UBERON:0004537!7.26e-17!60;UBERON:0006965!7.26e-17!60;UBERON:0001637!3.92e-16!42;UBERON:0003509!3.92e-16!42;UBERON:0004572!3.92e-16!42;UBERON:0001009!2.16e-15!113;UBERON:0004535!6.98e-15!110;UBERON:0002049!2.64e-14!79;UBERON:0007798!2.64e-14!79;UBERON:0004573!1.49e-11!33;UBERON:0004571!1.49e-11!33;UBERON:0004111!2.11e-09!241;UBERON:0007100!1.53e-08!27;UBERON:0000025!3.66e-08!194;UBERON:0000490!3.74e-08!138;UBERON:0000948!3.76e-08!24;UBERON:0005498!3.76e-08!24;UBERON:0004140!3.76e-08!24;UBERON:0009881!3.76e-08!24;UBERON:0004141!3.76e-08!24;UBERON:0003084!3.76e-08!24;UBERON:0007005!3.76e-08!24;UBERON:0004139!3.76e-08!24;UBERON:0004291!3.76e-08!24;UBERON:0000477!2.60e-07!286;UBERON:0001986!4.02e-07!18;UBERON:0004638!4.02e-07!18;UBERON:0004852!4.02e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.30e-13;42!UBERON:0003509;4.30e-13;42!UBERON:0004572;4.30e-13;42!UBERON:0004573;1.51e-10;33!UBERON:0004571;1.51e-10;33!UBERON:0007500;2.45e-08;56!UBERON:0001981;2.45e-08;56!UBERON:0004537;2.45e-08;56!UBERON:0000948;1.01e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.01e-20,117;UBERON:0001637,1.80e-18,42;UBERON:0003509,1.80e-18,42;UBERON:0004572,1.80e-18,42;UBERON:0004872,1.77e-16,83;UBERON:0000055,3.85e-16,68;UBERON:0007500,4.99e-15,59;UBERON:0001981,4.99e-15,59;UBERON:0004537,4.99e-15,59;UBERON:0006965,4.99e-15,59;UBERON:0004535,1.26e-13,109;UBERON:0001009,6.57e-13,112;UBERON:0002049,1.08e-12,78;UBERON:0007798,1.08e-12,78;UBERON:0004573,3.47e-12,33;UBERON:0004571,3.47e-12,33;UBERON:0000948,1.40e-09,24;UBERON:0005498,1.40e-09,24;UBERON:0004140,1.40e-09,24;UBERON:0009881,1.40e-09,24;UBERON:0004141,1.40e-09,24;UBERON:0003084,1.40e-09,24;UBERON:0007005,1.40e-09,24;UBERON:0004139,1.40e-09,24;UBERON:0004291,1.40e-09,24;UBERON:0007100,4.61e-08,27;UBERON:0000025,4.64e-08,192;UBERON:0003081,6.70e-08,203;UBERON:0004111,4.27e-07,240 | |||
|phase1_expression=1.45342703416445,1.49870366723688,0.704772020479856,0,0.446961094427288,1.74467704820074,2.53299878168311,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,1.03423704220986,0,1.35426486594342,0,0,0.224723484445085,2.14258724659632,0.320929027076094,0,0,0,0,6.67481248845743,7.94339314567596,4.9825779919646,0,0,0,4.84319602106695,3.31449872388808,6.32924774881769,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0.889509253863555,0.853460445133014,0,0,0,0.954053754535364,0,0,0.764546456250458,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.66221330396589,1.44575660953827,1.00267582127178,0.579386075843295,0.795285947051099,1.94653948121054,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,1.59009925893364,0.860234595106124,0.694281003215189,5.08777147731609,1.25849830862972,0.825354125820202,1.04497483268405,0.258416759169329,0,0.66944122552934,0.402829317109147,0,0.488124115096339,0.367663080345869,4.0507097394088,0.625098097988558,1.12264686313085,2.13961812918312,3.06633274931766,0.949265659568129,0.732806975721629,0,0,0,3.97577561356255,3.03913227994991,3.04541115870403,2.29469296599051,0,0.560677600142307,0,2.22000793575444,0.311211035399766,2.55950276932407,0.326923806226917,0,0,3.04617861383936,0,0.570471821544449,0.298897361103602,0,0,0,0,0.122834317311768,0.619954687054593,3.56400857184616,2.47266929278557,0,2.87447256726495,0,0,0.277064115484183,0,0,2.25357088359895,1.36118619792025,0.179389635688862,1.2813443329114,1.48352330811693,0,0.824420233907511,1.28820270022815,1.11670113798954,0,1.16924406193438,0.757301322732344,1.47279837827679,0.646584227275248,0,0.10075209822764,0.339121184620975,0.386521706326594,0.545492241181669,0.286804595389004,0.365921118388786,0,0.232387885739037,0.310983165046111,0.756962552626885,0,1.56449532329816,0,0,0,0,0.118306800039844,0,0,0.330881918197182,0.217879444092406,0,0.269662616320329,0,0,0,0,1.2347220339942,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.185176890317059,1.62904152655162,0,0,0,0.587043471179108,1.15493158208859,3.24089858803628,2.28304982681518,0,0,0.492434012174795,0,0.891786973732369,0,6.2153387433578,1.27597587518148,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.07333828582095,1.16344544182,0,0,1.06375246633948,0,0,0,0,0.57191197463259,0,0,1.30294473717494,0.710783897485092,0,0.602878754119172,0,0.699810938274399,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07970861530807,1.60586089917446,2.83864347061082,1.87426263988341,0,0,0,1.32845119707087,0.368738337083406,0.695068915744663,0,0,0,0,0,0,0,0,4.46594054073798,3.37616341233737,4.2099014164961,1.66580894032411,3.58195074346692,2.89537058058494,1.48418066444991,0.616838775210622,2.48586415438378,0.246381468041427,2.07701771673448,0.464841513839837,0,2.00506470303285,0,0.574072240823034,0.182091168006717,0.262248829918848,1.35359883872224,0.693138033939733,0.784349769176855,1.46139224653261,0.316654886678627,1.13733384070897,1.36074964221213,0.215915916102139,1.54227252690289,0,0,1.78413391131527,1.66215201785745,2.46262230194396,0,0,0,0,0,0.103041011647722,0,0,1.72279661398852,0,0,0.290012154876366,0,0,0,0,0,0.0852266274161009,0.356128142586949,0.495854746082934,0,0.893288987462089,0.4046311234222,3.253918845081,1.88887408098384,0,0.924100740528266,1.59691809095107,0,2.22389062924704,3.43499728180779,0,0,0.762520775695299,0.511795582622668,0,1.59101623962968,2.35484592059769,0.179872457583315,1.09814811894422,0.117812402345686,2.22400729730648,1.58510321173008,1.68503382495592,0.48763373908959,0.974853958525138,3.16950440270266,0,0.707027159768564,2.26016233240486,0,2.65375590096488,3.06915619677634,0,0,3.85529716229138,1.8589409885985,1.40847801266121,0,0.196498082026242,5.35006577221875,0,0.633322905892992,1.31717957183961,0,0.349934720244983,0,0,0,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.140669416410513,0.667852230137435,0,0,0.996239941255349,0.276283915531148,0.251932747854276,0.409074730008619,0.246169610922139,1.24415835064723,1.07842021376792,0.179021174675609,0,0.394573622547734,0,1.11136990144637,0,0,0,0,0,0,0,1.01701460117107,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0.153900517007594,3.53220373125704,0.23056390438806,0,0,0,0.824378340616761,0,0,0,0.166211681900156,0,0.588187602953219,0.671286347903371,0,0,2.3209787098083,3.26465616318295,0,0,0,0.176915129006678,0,1.18608451472249,0.247127877893006,0.730953646538188,0,0,0,0,0.586993856796269,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0.69647365264322,0,0.171986032471617,0.193512662578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| |||
|short_description=p4@IL6 | |||
}} |
Latest revision as of 19:32, 17 September 2015
Short description: | p4@IL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IL6_5end |
Coexpression cluster: | NA |
Association with transcript: | 175bp_to_ENST00000485300_5end |
EntrezGene: | IL6 |
HGNC: | 6018 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.64e-11 | 32 |
cardiocyte | 9.73e-09 | 16 |
preadipocyte | 9.74e-09 | 12 |
fibroblast | 1.32e-08 | 76 |
mesodermal cell | 2.76e-08 | 121 |
smooth muscle cell | 1.15e-07 | 43 |
smooth muscle myoblast | 1.15e-07 | 43 |
multi fate stem cell | 1.37e-07 | 427 |
somatic stem cell | 3.66e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.01e-20 | 117 |
artery | 1.80e-18 | 42 |
arterial blood vessel | 1.80e-18 | 42 |
arterial system | 1.80e-18 | 42 |
splanchnic layer of lateral plate mesoderm | 1.77e-16 | 83 |
vessel | 3.85e-16 | 68 |
epithelial tube open at both ends | 4.99e-15 | 59 |
blood vessel | 4.99e-15 | 59 |
blood vasculature | 4.99e-15 | 59 |
vascular cord | 4.99e-15 | 59 |
cardiovascular system | 1.26e-13 | 109 |
circulatory system | 6.57e-13 | 112 |
vasculature | 1.08e-12 | 78 |
vascular system | 1.08e-12 | 78 |
systemic artery | 3.47e-12 | 33 |
systemic arterial system | 3.47e-12 | 33 |
heart | 1.40e-09 | 24 |
primitive heart tube | 1.40e-09 | 24 |
primary heart field | 1.40e-09 | 24 |
anterior lateral plate mesoderm | 1.40e-09 | 24 |
heart tube | 1.40e-09 | 24 |
heart primordium | 1.40e-09 | 24 |
cardiac mesoderm | 1.40e-09 | 24 |
cardiogenic plate | 1.40e-09 | 24 |
heart rudiment | 1.40e-09 | 24 |
primary circulatory organ | 4.61e-08 | 27 |
tube | 4.64e-08 | 192 |
lateral plate mesoderm | 6.70e-08 | 203 |
anatomical conduit | 4.27e-07 | 240 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.77e-12 | 14 |
female reproductive organ cancer | 5.88e-07 | 27 |