FFCP PHASE1:Hg19::chr7:17338266..17338282,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=196 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=348 | |||
|TSSclassifier=strong | |||
|UniProt=P35869 | |||
|association_with_transcript=0bp_to_NM_001621,uc003stt.3,uc011jxz.1_5end | |||
|cluster_id=chr7:17338266..17338282,+ | |||
|coexpression_cluster_id=C4670 | |||
|description=CAGE_peak_1_at_AHR_5end | |||
|id=chr7:17338266..17338282,+ | |||
|ontology_enrichment_celltype=CL:0000557!5.35e-23!71;CL:0002057!2.94e-22!42;CL:0000860!1.98e-21!45;CL:0000766!1.02e-20!76;CL:0000839!1.43e-19!70;CL:0002009!1.81e-19!65;CL:0002194!1.45e-18!63;CL:0000576!1.45e-18!63;CL:0000040!1.45e-18!63;CL:0000559!1.45e-18!63;CL:0002320!1.94e-10!365;CL:0000048!2.09e-10!430;CL:0000134!6.58e-10!358;CL:0000723!3.14e-09!436;CL:0000738!1.06e-08!140;CL:0000034!2.09e-08!444;CL:0000763!5.13e-08!112;CL:0000049!5.13e-08!112;CL:0002031!1.14e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.07e-19;33!CL:0002057;1.07e-19;33!CL:0000473;3.16e-16;39!CL:0000234;3.16e-16;39!CL:0000576;9.37e-13;48!CL:0000766;1.08e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.47e-23,67;CL:0000860,2.79e-22,42;CL:0002057,2.79e-22,42;CL:0000473,4.03e-22,48;CL:0000234,4.03e-22,48;CL:0000766,3.57e-21,72;CL:0002009,5.78e-20,61;CL:0000839,5.89e-20,66;CL:0002194,4.76e-19,59;CL:0000576,4.76e-19,59;CL:0000040,4.76e-19,59;CL:0000559,4.76e-19,59;CL:0002320,1.46e-10,361;CL:0000048,2.52e-10,427;CL:0000134,4.97e-10,354;CL:0000723,3.79e-09,433;CL:0000738,1.00e-08,136;CL:0000034,2.79e-08,441;CL:0000763,4.73e-08,108;CL:0000049,4.73e-08,108;CL:0002031,1.28e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.77e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!7.05e-23!115;UBERON:0002371!9.45e-22!80;UBERON:0002193!1.63e-21!112;UBERON:0002390!3.47e-21!102;UBERON:0003061!3.47e-21!102;UBERON:0004765!3.17e-19!101;UBERON:0001434!3.17e-19!101;UBERON:0001474!5.39e-19!86;UBERON:0002204!3.96e-18!167;UBERON:0000926!1.27e-16!448;UBERON:0004120!1.27e-16!448;UBERON:0006603!1.27e-16!448;UBERON:0003081!2.69e-16!216;UBERON:0002384!4.97e-10!375;UBERON:0000467!2.35e-09!625;UBERON:0000480!4.37e-09!626;UBERON:0000062!1.32e-08!511;UBERON:0000468!6.15e-08!659;UBERON:0002050!9.36e-07!605;UBERON:0005423!9.36e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,3.20e-22,93;UBERON:0002371,3.36e-22,76;UBERON:0002193,9.99e-22,108;UBERON:0002390,1.91e-21,98;UBERON:0003061,1.91e-21,98;UBERON:0001434,3.76e-20,100;UBERON:0001474,2.45e-19,82;UBERON:0004765,5.98e-19,90;UBERON:0002204,1.41e-18,167;UBERON:0003081,2.21e-18,203;UBERON:0000926,1.50e-15,315;UBERON:0004120,1.50e-15,315;UBERON:0006603,1.50e-15,315;UBERON:0002384,3.86e-10,371;UBERON:0000923,1.23e-07,560;UBERON:0010316,1.23e-07,560;UBERON:0005291,1.23e-07,560;UBERON:0006598,1.23e-07,560;UBERON:0010317,1.23e-07,560;UBERON:0002532,1.23e-07,560;UBERON:0002050,1.85e-07,564 | |||
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| |||
|short_description=p1@AHR | |||
}} |
Latest revision as of 13:29, 17 September 2015
Short description: | p1@AHR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AHR_5end |
Coexpression cluster: | C4670_CD14_Mast_Basophils_placenta_Fibroblast_transitionalcell_Chondrocyte |
Association with transcript: | 0bp_to_NM_001621, uc003stt.3, uc011jxz.1_5end |
EntrezGene: | AHR |
HGNC: | 348 |
UniProt: | P35869 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.47e-23 | 67 |
classical monocyte | 2.79e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.79e-22 | 42 |
defensive cell | 4.03e-22 | 48 |
phagocyte | 4.03e-22 | 48 |
myeloid leukocyte | 3.57e-21 | 72 |
macrophage dendritic cell progenitor | 5.78e-20 | 61 |
myeloid lineage restricted progenitor cell | 5.89e-20 | 66 |
monopoietic cell | 4.76e-19 | 59 |
monocyte | 4.76e-19 | 59 |
monoblast | 4.76e-19 | 59 |
promonocyte | 4.76e-19 | 59 |
connective tissue cell | 1.46e-10 | 361 |
multi fate stem cell | 2.52e-10 | 427 |
mesenchymal cell | 4.97e-10 | 354 |
somatic stem cell | 3.79e-09 | 433 |
leukocyte | 1.00e-08 | 136 |
stem cell | 2.79e-08 | 441 |
myeloid cell | 4.73e-08 | 108 |
common myeloid progenitor | 4.73e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 1.28e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
immune system | 3.20e-22 | 93 |
bone marrow | 3.36e-22 | 76 |
hemolymphoid system | 9.99e-22 | 108 |
hematopoietic system | 1.91e-21 | 98 |
blood island | 1.91e-21 | 98 |
skeletal system | 3.76e-20 | 100 |
bone element | 2.45e-19 | 82 |
skeletal element | 5.98e-19 | 90 |
musculoskeletal system | 1.41e-18 | 167 |
lateral plate mesoderm | 2.21e-18 | 203 |
mesoderm | 1.50e-15 | 315 |
mesoderm-derived structure | 1.50e-15 | 315 |
presumptive mesoderm | 1.50e-15 | 315 |
connective tissue | 3.86e-10 | 371 |
germ layer | 1.23e-07 | 560 |
germ layer / neural crest | 1.23e-07 | 560 |
embryonic tissue | 1.23e-07 | 560 |
presumptive structure | 1.23e-07 | 560 |
germ layer / neural crest derived structure | 1.23e-07 | 560 |
epiblast (generic) | 1.23e-07 | 560 |
embryonic structure | 1.85e-07 | 564 |