FFCP PHASE1:Mm9::chr2:55288329..55288360,+: Difference between revisions
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{{FFCP|EntrezGene=16519|HGNC=|MCL_coexpression_id=1|UniProt=P63250|association_with_transcript=-20bp_to_ENSMUST00000067101_5end|description=CAGE_peak_2_at_Kcnj3_5end|id=chr2:55288329..55288360,+|ontology_enrichment_celltype=CL:0000540!1.09e-10!33;CL:0000047!1.09e-10!33;CL:0000031!1.09e-10!33;CL:0000404!1.09e-10!33;CL:0000117!2.90e-09!23;CL:0000337!2.90e-09!23;CL:0000393!6.05e-08!39;CL:0000211!6.05e-08!39|ontology_enrichment_celltype_v019_2=CL:0000540,8.41e-12,33;CL:0000047,8.41e-12,33;CL:0000031,8.41e-12,33;CL:0000404,8.41e-12,33;CL:0000393,8.58e-10,39;CL:0000211,8.58e-10,39;CL:0000117,2.85e-09,23;CL:0000337,2.85e-09,23;CL:0002319,1.93e-07,43;CL:0000221,4.01e-07,44;CL:0000133,4.01e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.53e-20!73;UBERON:0005743!3.53e-20!73;UBERON:0000073!2.60e-19!75;UBERON:0001016!2.60e-19!75;UBERON:0001049!1.42e-17!52;UBERON:0005068!1.42e-17!52;UBERON:0006241!1.42e-17!52;UBERON:0007135!1.42e-17!52;UBERON:0000955!4.23e-17!50;UBERON:0006238!4.23e-17!50;UBERON:0000033!2.00e-16!63;UBERON:0002616!2.34e-16!49;UBERON:0002020!2.57e-14!34;UBERON:0004121!8.92e-14!102;UBERON:0000924!8.92e-14!102;UBERON:0006601!8.92e-14!102;UBERON:0002346!1.38e-13!71;UBERON:0003075!1.38e-13!71;UBERON:0007284!1.38e-13!71;UBERON:0003080!1.93e-13!40;UBERON:0000025!2.65e-13!114;UBERON:0003056!2.81e-13!49;UBERON:0002780!7.86e-13!39;UBERON:0001890!7.86e-13!39;UBERON:0006240!7.86e-13!39;UBERON:0004111!1.11e-12!122;UBERON:0002791!6.04e-12!29;UBERON:0003528!6.04e-12!29;UBERON:0001893!6.04e-12!29;UBERON:0000956!2.65e-09!21;UBERON:0001869!2.65e-09!21;UBERON:0000203!2.65e-09!21;UBERON:0002021!1.09e-08!10;UBERON:0000411!1.09e-08!10;UBERON:0001950!1.09e-08!10;UBERON:0007811!5.22e-08!86;UBERON:0007100!6.14e-08!18;UBERON:0000948!6.14e-08!18;UBERON:0005498!6.14e-08!18;UBERON:0004140!6.14e-08!18;UBERON:0009881!6.14e-08!18;UBERON:0004141!6.14e-08!18;UBERON:0003084!6.14e-08!18;UBERON:0007005!6.14e-08!18;UBERON:0004139!6.14e-08!18;UBERON:0004291!6.14e-08!18;UBERON:0002619!1.41e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.69e-26,73;UBERON:0001016,1.06e-24,75;UBERON:0010314,2.27e-24,92;UBERON:0000073,1.19e-22,54;UBERON:0001049,8.26e-21,52;UBERON:0005068,8.26e-21,52;UBERON:0006241,8.26e-21,52;UBERON:0007135,8.26e-21,52;UBERON:0004121,7.64e-19,95;UBERON:0000924,7.64e-19,95;UBERON:0006601,7.64e-19,95;UBERON:0002020,1.53e-17,34;UBERON:0000955,1.97e-17,47;UBERON:0006238,1.97e-17,47;UBERON:0000025,8.07e-17,114;UBERON:0002346,1.35e-16,64;UBERON:0003075,1.35e-16,64;UBERON:0007284,1.35e-16,64;UBERON:0002616,2.01e-16,46;UBERON:0004111,4.14e-16,122;UBERON:0003528,5.12e-14,29;UBERON:0002791,5.12e-14,29;UBERON:0001893,5.12e-14,29;UBERON:0003080,5.25e-14,40;UBERON:0002780,3.59e-13,39;UBERON:0001890,3.59e-13,39;UBERON:0006240,3.59e-13,39;UBERON:0010371,5.45e-13,73;UBERON:0002021,1.41e-12,10;UBERON:0000411,1.41e-12,10;UBERON:0001950,1.41e-12,10;UBERON:0007100,2.59e-12,18;UBERON:0000948,2.59e-12,18;UBERON:0005498,2.59e-12,18;UBERON:0004140,2.59e-12,18;UBERON:0009881,2.59e-12,18;UBERON:0004141,2.59e-12,18;UBERON:0003084,2.59e-12,18;UBERON:0007005,2.59e-12,18;UBERON:0004139,2.59e-12,18;UBERON:0004291,2.59e-12,18;UBERON:0000956,1.73e-11,21;UBERON:0001869,1.73e-11,21;UBERON:0000203,1.73e-11,21;UBERON:0003056,8.96e-11,49;UBERON:0002619,6.76e-09,17;UBERON:0004535,1.48e-08,23;UBERON:0001009,1.48e-08,23;UBERON:0003076,9.53e-08,12;UBERON:0003057,9.53e-08,12;UBERON:0000483,3.94e-07,174;UBERON:0003103,4.52e-07,43;UBERON:0000119,7.21e-07,176|phase1_expression=0,0,0,0,0,1.00727563147134,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27268398936633,0,0,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54701627683233,1.21389876515759,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,1.24427534770173,2.56511282830212,1.47227472945967,2.85650984403804,2.20868540951614,0.489963196859816,0.575072826109418,0.919218786610021,11.0115880999389,22.3452841649078,14.2854075928306,0.395658863190582,1.18933936683133,1.04182674111352,9.49222196604695,10.6924895906019,8.09830713217094,4.12480019663135,2.56269025438385,2.60959224155421,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0.289198713839823,0,0,0,0,0,41.5748731756397,40.0043210013699,0,0,0,0,18.574039286198,11.4375150704657,0.502617408451458,39.631945003839,38.3573185995496,20.5710164113964,16.8730913590468,0,0.248813941220186,0.252722758433675,0.210441855886474,0.390361328888111,0,0.720248519221397,0.30140963567143,0.408218994907967,0.512454881139399,0.562210347358373,2.58703370739016,0,0,0,0.219195732427575,0,0.696504333044333,0,0.995171334092466,0,0,0,2.07125772535502,3.28336483973535,3.24111710629827,3.78791576936336,2.55793501271625,5.86215028972037,5.8133486187602,6.70683503499048,8.29033930806903,6.91151369636618,9.85004784474571,19.4565142910054,29.5323974599171,27.6633145266724,46.0328016348075,33.015521924568,3.2929475961371,0,0,0,0.232236671860439,0.257734922644187,0.605050573870028,0,0.190225626112559,0.949058123089023,0.988193728344065,0,0.397912944082302,0.58489226135736,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.568474235311454,0.488894929326078,0.339490171550376,0,1.00503754465089,0.952174563544055,0.585400943573396,0.630540576424764,0.221464689648775,1.43509291791738,1.63863314715738,1.38147985492716,0.289298117163023,0,0,0.491764273019036,0,15.8945084087914,14.8858841972098,0,0,0,0.390438744296638,1.50796378412959,2.38968797952552,5.79276552614225,2.83076530788832,2.02405350837447,1.75353514746787,3.95287777946523,48.8408400961147,1.84522110770749,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.775284879504663,0,0,0.316036757935816,0,0,12.2558258071364,0.36012218806262,0.129358683782755,0,1.24138163549592,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0,0,0.120625849856312,0,0,0,13.5360470467672,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0.129614973291793,1.86401793926078,0,0.448549638131936,1.32366792365678,0.583353565032143,0.645799117388655,0.506868376472335,1.40828686374905,0.39061315453185,0.524296722128554,0,0,0,0,0,0.649604114888975,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0,0,0,0,0.233753804363138,1.36038230169127,0,0,0,0.579568782096571,0,0,0,0,34.4498623996411,26.2385384809091,27.498984645091,24.5750050751473,53.4364365421101,50.6113911251099,45.226507515531,42.3301931030767,35.7982503097522,40.9030646283938,0,0,0,0.972426868273176,0,0.367687016900028,1.55572709461131,0.824140228955577,1.28367683836726,0.758091635291392,1.77435509923168,0.754505365544305,1.12369808963859,0.768301828858431,0.976402972245426,0.952587382566147,0.579421629724277,1.35036454324594,0,1.32479028120958,0.342869252385415,0.70990322463735,0.476872379894642,0.872078499793971,1.2234219453993,1.35383372626682,1.09756783723664,0.789209134313529,1.08643291076689,0,0.711810108745045,0.394017929502254,1.63692417267876,1.85924209423159,1.15743966588685,1.49886346762768,0.467863216890817,0.859484216193193,0.191288332068843,0,0.695603506861264|short_description=p2@Kcnj3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16519 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P63250 | |||
|association_with_transcript=-20bp_to_ENSMUST00000067101_5end | |||
|cluster_id=chr2:55288329..55288360,+ | |||
|description=CAGE_peak_2_at_Kcnj3_5end | |||
|id=chr2:55288329..55288360,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.09e-10!33;CL:0000047!1.09e-10!33;CL:0000031!1.09e-10!33;CL:0000404!1.09e-10!33;CL:0000117!2.90e-09!23;CL:0000337!2.90e-09!23;CL:0000393!6.05e-08!39;CL:0000211!6.05e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.41e-12,33;CL:0000047,8.41e-12,33;CL:0000031,8.41e-12,33;CL:0000404,8.41e-12,33;CL:0000393,8.58e-10,39;CL:0000211,8.58e-10,39;CL:0000117,2.85e-09,23;CL:0000337,2.85e-09,23;CL:0002319,1.93e-07,43;CL:0000221,4.01e-07,44;CL:0000133,4.01e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.53e-20!73;UBERON:0005743!3.53e-20!73;UBERON:0000073!2.60e-19!75;UBERON:0001016!2.60e-19!75;UBERON:0001049!1.42e-17!52;UBERON:0005068!1.42e-17!52;UBERON:0006241!1.42e-17!52;UBERON:0007135!1.42e-17!52;UBERON:0000955!4.23e-17!50;UBERON:0006238!4.23e-17!50;UBERON:0000033!2.00e-16!63;UBERON:0002616!2.34e-16!49;UBERON:0002020!2.57e-14!34;UBERON:0004121!8.92e-14!102;UBERON:0000924!8.92e-14!102;UBERON:0006601!8.92e-14!102;UBERON:0002346!1.38e-13!71;UBERON:0003075!1.38e-13!71;UBERON:0007284!1.38e-13!71;UBERON:0003080!1.93e-13!40;UBERON:0000025!2.65e-13!114;UBERON:0003056!2.81e-13!49;UBERON:0002780!7.86e-13!39;UBERON:0001890!7.86e-13!39;UBERON:0006240!7.86e-13!39;UBERON:0004111!1.11e-12!122;UBERON:0002791!6.04e-12!29;UBERON:0003528!6.04e-12!29;UBERON:0001893!6.04e-12!29;UBERON:0000956!2.65e-09!21;UBERON:0001869!2.65e-09!21;UBERON:0000203!2.65e-09!21;UBERON:0002021!1.09e-08!10;UBERON:0000411!1.09e-08!10;UBERON:0001950!1.09e-08!10;UBERON:0007811!5.22e-08!86;UBERON:0007100!6.14e-08!18;UBERON:0000948!6.14e-08!18;UBERON:0005498!6.14e-08!18;UBERON:0004140!6.14e-08!18;UBERON:0009881!6.14e-08!18;UBERON:0004141!6.14e-08!18;UBERON:0003084!6.14e-08!18;UBERON:0007005!6.14e-08!18;UBERON:0004139!6.14e-08!18;UBERON:0004291!6.14e-08!18;UBERON:0002619!1.41e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.69e-26,73;UBERON:0001016,1.06e-24,75;UBERON:0010314,2.27e-24,92;UBERON:0000073,1.19e-22,54;UBERON:0001049,8.26e-21,52;UBERON:0005068,8.26e-21,52;UBERON:0006241,8.26e-21,52;UBERON:0007135,8.26e-21,52;UBERON:0004121,7.64e-19,95;UBERON:0000924,7.64e-19,95;UBERON:0006601,7.64e-19,95;UBERON:0002020,1.53e-17,34;UBERON:0000955,1.97e-17,47;UBERON:0006238,1.97e-17,47;UBERON:0000025,8.07e-17,114;UBERON:0002346,1.35e-16,64;UBERON:0003075,1.35e-16,64;UBERON:0007284,1.35e-16,64;UBERON:0002616,2.01e-16,46;UBERON:0004111,4.14e-16,122;UBERON:0003528,5.12e-14,29;UBERON:0002791,5.12e-14,29;UBERON:0001893,5.12e-14,29;UBERON:0003080,5.25e-14,40;UBERON:0002780,3.59e-13,39;UBERON:0001890,3.59e-13,39;UBERON:0006240,3.59e-13,39;UBERON:0010371,5.45e-13,73;UBERON:0002021,1.41e-12,10;UBERON:0000411,1.41e-12,10;UBERON:0001950,1.41e-12,10;UBERON:0007100,2.59e-12,18;UBERON:0000948,2.59e-12,18;UBERON:0005498,2.59e-12,18;UBERON:0004140,2.59e-12,18;UBERON:0009881,2.59e-12,18;UBERON:0004141,2.59e-12,18;UBERON:0003084,2.59e-12,18;UBERON:0007005,2.59e-12,18;UBERON:0004139,2.59e-12,18;UBERON:0004291,2.59e-12,18;UBERON:0000956,1.73e-11,21;UBERON:0001869,1.73e-11,21;UBERON:0000203,1.73e-11,21;UBERON:0003056,8.96e-11,49;UBERON:0002619,6.76e-09,17;UBERON:0004535,1.48e-08,23;UBERON:0001009,1.48e-08,23;UBERON:0003076,9.53e-08,12;UBERON:0003057,9.53e-08,12;UBERON:0000483,3.94e-07,174;UBERON:0003103,4.52e-07,43;UBERON:0000119,7.21e-07,176 | |||
|phase1_expression=0,0,0,0,0,1.00727563147134,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27268398936633,0,0,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54701627683233,1.21389876515759,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,1.24427534770173,2.56511282830212,1.47227472945967,2.85650984403804,2.20868540951614,0.489963196859816,0.575072826109418,0.919218786610021,11.0115880999389,22.3452841649078,14.2854075928306,0.395658863190582,1.18933936683133,1.04182674111352,9.49222196604695,10.6924895906019,8.09830713217094,4.12480019663135,2.56269025438385,2.60959224155421,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0.289198713839823,0,0,0,0,0,41.5748731756397,40.0043210013699,0,0,0,0,18.574039286198,11.4375150704657,0.502617408451458,39.631945003839,38.3573185995496,20.5710164113964,16.8730913590468,0,0.248813941220186,0.252722758433675,0.210441855886474,0.390361328888111,0,0.720248519221397,0.30140963567143,0.408218994907967,0.512454881139399,0.562210347358373,2.58703370739016,0,0,0,0.219195732427575,0,0.696504333044333,0,0.995171334092466,0,0,0,2.07125772535502,3.28336483973535,3.24111710629827,3.78791576936336,2.55793501271625,5.86215028972037,5.8133486187602,6.70683503499048,8.29033930806903,6.91151369636618,9.85004784474571,19.4565142910054,29.5323974599171,27.6633145266724,46.0328016348075,33.015521924568,3.2929475961371,0,0,0,0.232236671860439,0.257734922644187,0.605050573870028,0,0.190225626112559,0.949058123089023,0.988193728344065,0,0.397912944082302,0.58489226135736,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.568474235311454,0.488894929326078,0.339490171550376,0,1.00503754465089,0.952174563544055,0.585400943573396,0.630540576424764,0.221464689648775,1.43509291791738,1.63863314715738,1.38147985492716,0.289298117163023,0,0,0.491764273019036,0,15.8945084087914,14.8858841972098,0,0,0,0.390438744296638,1.50796378412959,2.38968797952552,5.79276552614225,2.83076530788832,2.02405350837447,1.75353514746787,3.95287777946523,48.8408400961147,1.84522110770749,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.775284879504663,0,0,0.316036757935816,0,0,12.2558258071364,0.36012218806262,0.129358683782755,0,1.24138163549592,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0,0,0.120625849856312,0,0,0,13.5360470467672,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0.129614973291793,1.86401793926078,0,0.448549638131936,1.32366792365678,0.583353565032143,0.645799117388655,0.506868376472335,1.40828686374905,0.39061315453185,0.524296722128554,0,0,0,0,0,0.649604114888975,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0,0,0,0,0.233753804363138,1.36038230169127,0,0,0,0.579568782096571,0,0,0,0,34.4498623996411,26.2385384809091,27.498984645091,24.5750050751473,53.4364365421101,50.6113911251099,45.226507515531,42.3301931030767,35.7982503097522,40.9030646283938,0,0,0,0.972426868273176,0,0.367687016900028,1.55572709461131,0.824140228955577,1.28367683836726,0.758091635291392,1.77435509923168,0.754505365544305,1.12369808963859,0.768301828858431,0.976402972245426,0.952587382566147,0.579421629724277,1.35036454324594,0,1.32479028120958,0.342869252385415,0.70990322463735,0.476872379894642,0.872078499793971,1.2234219453993,1.35383372626682,1.09756783723664,0.789209134313529,1.08643291076689,0,0.711810108745045,0.394017929502254,1.63692417267876,1.85924209423159,1.15743966588685,1.49886346762768,0.467863216890817,0.859484216193193,0.191288332068843,0,0.695603506861264 | |||
|short_description=p2@Kcnj3 | |||
}} |
Latest revision as of 18:52, 26 September 2015
Short description: | p2@Kcnj3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kcnj3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -20bp_to_ENSMUST00000067101_5end |
EntrezGene: | Kcnj3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.41e-12 | 33 |
neuronal stem cell | 8.41e-12 | 33 |
neuroblast | 8.41e-12 | 33 |
electrically signaling cell | 8.41e-12 | 33 |
electrically responsive cell | 8.58e-10 | 39 |
electrically active cell | 8.58e-10 | 39 |
CNS neuron (sensu Vertebrata) | 2.85e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.85e-09 | 23 |
neural cell | 1.93e-07 | 43 |
ectodermal cell | 4.01e-07 | 44 |
neurectodermal cell | 4.01e-07 | 44 |