FFCP PHASE1:Hg19::chr7:148982365..148982379,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=155060 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000426347,ENST00000463462,NR_036573,uc011kup.1_5end | |||
|cluster_id=chr7:148982365..148982379,+ | |||
|description=CAGE_peak_1_at_LOC155060_5end | |||
|id=chr7:148982365..148982379,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.78e-09!18;CL:0000789!4.78e-09!18;CL:0002420!4.78e-09!18;CL:0002419!4.78e-09!18;CL:0000790!4.78e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.79e-15;18!CL:0000789;4.79e-15;18!CL:0002419;4.79e-15;18!CL:0000625;1.96e-10;11!CL:0000084;2.40e-09;25!CL:0000624;1.81e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.29e-15,18;CL:0000789,1.29e-15,18;CL:0002420,1.29e-15,18;CL:0002419,1.29e-15,18;CL:0000790,1.29e-15,18;CL:0000625,6.52e-11,11;CL:0000084,1.01e-09,25;CL:0000827,1.01e-09,25;CL:0000624,1.35e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;4.79e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.01e-14!57;UBERON:0005068!1.01e-14!57;UBERON:0006241!1.01e-14!57;UBERON:0007135!1.01e-14!57;UBERON:0001017!2.86e-14!82;UBERON:0005743!1.93e-13!86;UBERON:0000073!4.90e-13!94;UBERON:0001016!4.90e-13!94;UBERON:0002616!6.75e-13!59;UBERON:0003080!1.53e-12!42;UBERON:0002780!1.96e-12!41;UBERON:0001890!1.96e-12!41;UBERON:0006240!1.96e-12!41;UBERON:0000955!1.03e-11!69;UBERON:0006238!1.03e-11!69;UBERON:0001869!1.18e-11!32;UBERON:0002020!2.03e-11!34;UBERON:0003528!2.03e-11!34;UBERON:0002619!2.45e-11!22;UBERON:0001893!3.10e-11!34;UBERON:0000956!5.97e-11!25;UBERON:0000203!5.97e-11!25;UBERON:0002791!6.05e-11!33;UBERON:0001950!6.88e-11!20;UBERON:0003075!8.49e-11!86;UBERON:0007284!8.49e-11!86;UBERON:0007023!5.58e-10!115;UBERON:0003056!5.79e-10!61;UBERON:0002346!9.12e-10!90;UBERON:0000153!1.89e-07!129;UBERON:0007811!1.89e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.41e-15;20!UBERON:0002619;3.20e-15;22!UBERON:0000956;1.02e-12;25!UBERON:0000203;1.02e-12;25!UBERON:0001869;1.22e-12;32!UBERON:0002791;1.30e-11;32!UBERON:0001893;1.80e-11;34!UBERON:0003528;2.27e-11;34!UBERON:0002020;2.27e-11;34!UBERON:0002780;5.21e-09;41!UBERON:0001890;5.21e-09;41!UBERON:0000073;8.15e-08;53!UBERON:0002616;8.15e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.39e-16,20;UBERON:0002619,1.18e-15,22;UBERON:0001017,9.45e-15,81;UBERON:0001049,1.00e-14,56;UBERON:0005068,1.00e-14,56;UBERON:0006241,1.00e-14,56;UBERON:0007135,1.00e-14,56;UBERON:0001869,3.56e-14,32;UBERON:0000073,9.66e-14,53;UBERON:0002616,9.66e-14,53;UBERON:0003528,3.80e-13,34;UBERON:0002020,3.80e-13,34;UBERON:0000956,4.33e-13,25;UBERON:0000203,4.33e-13,25;UBERON:0002791,5.10e-13,32;UBERON:0001893,6.39e-13,34;UBERON:0001016,6.75e-13,89;UBERON:0002780,8.30e-13,41;UBERON:0001890,8.30e-13,41;UBERON:0003080,8.30e-13,41;UBERON:0006240,8.30e-13,41;UBERON:0000955,1.06e-11,68;UBERON:0006238,1.06e-11,68;UBERON:0003075,2.32e-11,82;UBERON:0007284,2.32e-11,82;UBERON:0002346,2.67e-10,86;UBERON:0003056,2.97e-10,61;UBERON:0010371,1.51e-08,104 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0,1.34465029290355,0,0.730310090387373,0.487932798790507,0.861847406537515,0.204000691244253,0.940364164434263,0.286235987131057,0.547497700291537,0.87879847716362,0,0.0821005894499457,0.314843125254717,0.393364276848904,0,0.464448369948228,0.919421224478927,0.30120591877825,0,4.49309763365749,0,0.587200878669695,0.553995408531877,0,0.651032612147555,0.447830948479849,0.647787332037959,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0.263384084775077,2.9506465517075,1.96505381374582,2.2616164889946,7.69057878797119,6.51844533267181,7.57516489175573,9.74133642039557,3.34231370655521,2.06224135232386,1.77227115666897,2.70803863765016,3.97083091149593,5.07231455483525,0.986627427622057,1.10540007114339,2.02862160014537,7.41432815810302,8.82884732696053,7.31748666634838,2.15287751125376,2.29932296161153,1.37450978193052,2.78321661221453,5.41561204350964,3.25541726928209,1.90090408889675,4.06552821509986,3.4556385011693,2.49861453104692,2.8413270245282,5.74789597844733,1.61285394579786,0,2.89648807765598,2.43806866313962,0,0.12786256184353,0.361439152384566,0,0.579386075843295,0,0,0.661743720148475,1.10864698731282,1.05401742831751,1.76821751921912,0,0.370784442784429,0,0.174129737299267,0.132957960518865,1.19245312152671,0.571994910780128,1.11437250398869,0.198762407366705,1.72046919021225,0,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0.66944122552934,0,1.52054421143703,0.488124115096339,0.367663080345869,0.81014194788176,0.446498641420399,0.44905874525234,0.225222960966644,0,1.89853131913626,0.549605231791222,0,0,0,0,0.506522046658319,2.25095607382472,2.29469296599051,0,0,1.06748995729705,0.49333509683432,0,0.404132016209064,0.326923806226917,0.151357427644931,0.576175924479999,0,0.936480230490962,0,0.149448680551801,0,0.161872944368132,0.421352420106746,0.816616685019573,0.122834317311768,0.206651562351531,0,0,0,0,0.505008341862199,0.125118519871964,0,0.438977620880838,0.30648779579902,0.600952235626387,0.226864366320042,0.89694817844431,0.427114777637135,0.423863802319124,1.80054657650641,0,0.257640540045629,0,0.506328996723799,0,1.00973509697646,0.0920498986422993,0.161646056818812,0.710019185033229,0.201504196455281,0.508681776931463,0,0.272746120590835,0.286804595389004,1.70763188581434,2.78312513475119,3.25343040034651,2.798848485415,1.7662459561294,5.10968302706162,0,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0.653638332277218,0,0,0,0.38474715694639,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0.983907508344908,0.343135620597051,0.219500570817251,0,0.201057944823262,0.370353780634118,0,1.03993478527958,1.44331342025273,0.231860809950154,0.117408694235822,0.288732895522148,0,0.190254152234598,1.58040879591855,0,0,0,0,0,0,0,0.268675568108545,0,0.766765358330422,0.492663237895943,0.088048434013226,0.207328115540772,0.288239906833923,0.12624243342638,0.507983154337352,0.763976851116555,1.17217447210047,0,0.102827492703324,0.901029173531752,0.857479297891735,0.448524337381443,1.74384027533312,0.51336800074665,0.387815147273333,0,0,0,0,0.257207374262142,0,0.266422179016099,0.428933980974443,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0.602878754119172,0.871533458600294,1.29964888536674,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0.336255431980582,1.77327684181734,1.50939302401662,1.28343036279748,0.76228387266739,2.60279707715243,0,0.670065061337395,1.27587750330633,0,0,0,0.12269149171914,0.500170521059677,0,0.415941723061614,0.356857977594324,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0,0.0868836144680828,1.17480694477644,1.71571711905428,2.06768026122887,1.72571360654893,1.06727557803444,0.303127571446259,0,0.604780586659361,0.248107807818777,0.767309866440312,0.561320188866147,0.384417447767103,0,0.160853921143607,1.48418066444991,0.616838775210622,0.177561725313127,0.328508624055237,0,0.929683027679674,0.362578348774867,0,0.644566922551274,0.114814448164607,0.728364672026868,0.786746489756545,1.35359883872224,0.462092022626489,2.35304930753057,2.92278449306521,0.949964660035881,0,0,0.647747748306418,0,1.08378575017541,1.00337954770971,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0,0,0.976135183992909,0.206082023295445,0.54941678891006,0.495056999523528,0,0,0,0.773365746336976,0,0.307007349452259,0.137836572484531,0.214840489736547,0.145016693914229,0.340906509664404,0.801288320820636,0.330569830721956,0.384380134730212,1.91419068741876,0.809262246844399,0.464845549297286,0.94443704049192,0.6970372701606,0,1.06461206063404,0,0,0.429374660225974,0,0.316379424718726,0.762520775695299,0.511795582622668,0,0.318203247925937,0,0.179872457583315,1.09814811894422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| |||
|short_description=p1@LOC155060 | |||
}} |
Latest revision as of 01:27, 17 September 2015
Short description: | p1@LOC155060 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC155060_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000426347, ENST00000463462, NR_036573, uc011kup.1_5end |
EntrezGene: | LOC155060 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.29e-15 | 18 |
alpha-beta T cell | 1.29e-15 | 18 |
immature T cell | 1.29e-15 | 18 |
mature T cell | 1.29e-15 | 18 |
immature alpha-beta T cell | 1.29e-15 | 18 |
CD8-positive, alpha-beta T cell | 6.52e-11 | 11 |
T cell | 1.01e-09 | 25 |
pro-T cell | 1.01e-09 | 25 |
CD4-positive, alpha-beta T cell | 1.35e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neocortex | 5.39e-16 | 20 |
regional part of cerebral cortex | 1.18e-15 | 22 |
central nervous system | 9.45e-15 | 81 |
neural tube | 1.00e-14 | 56 |
neural rod | 1.00e-14 | 56 |
future spinal cord | 1.00e-14 | 56 |
neural keel | 1.00e-14 | 56 |
cerebral hemisphere | 3.56e-14 | 32 |
regional part of nervous system | 9.66e-14 | 53 |
regional part of brain | 9.66e-14 | 53 |
brain grey matter | 3.80e-13 | 34 |
gray matter | 3.80e-13 | 34 |
cerebral cortex | 4.33e-13 | 25 |
pallium | 4.33e-13 | 25 |
regional part of telencephalon | 5.10e-13 | 32 |
telencephalon | 6.39e-13 | 34 |
nervous system | 6.75e-13 | 89 |
regional part of forebrain | 8.30e-13 | 41 |
forebrain | 8.30e-13 | 41 |
anterior neural tube | 8.30e-13 | 41 |
future forebrain | 8.30e-13 | 41 |
brain | 1.06e-11 | 68 |
future brain | 1.06e-11 | 68 |
neural plate | 2.32e-11 | 82 |
presumptive neural plate | 2.32e-11 | 82 |
neurectoderm | 2.67e-10 | 86 |
pre-chordal neural plate | 2.97e-10 | 61 |
ecto-epithelium | 1.51e-08 | 104 |