FFCP PHASE1:Hg19::chr7:148396041..148396059,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8454 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2551 | |||
|TSSclassifier=strong | |||
|UniProt=E7EWR0 | |||
|association_with_transcript=52bp_to_ENST00000433865_5end | |||
|cluster_id=chr7:148396041..148396059,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_CUL1_5end | |||
|id=chr7:148396041..148396059,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.18e-23!45;CL:0002057!3.86e-22!42;CL:0000557!4.48e-17!71;CL:0000738!5.55e-17!140;CL:0002009!2.92e-16!65;CL:0002031!1.65e-15!124;CL:0000839!2.12e-15!70;CL:0002194!3.32e-15!63;CL:0000576!3.32e-15!63;CL:0000040!3.32e-15!63;CL:0000559!3.32e-15!63;CL:0002087!3.81e-15!119;CL:0000766!1.76e-14!76;CL:0000037!2.97e-12!172;CL:0000566!2.97e-12!172;CL:0002032!6.86e-12!165;CL:0000837!6.86e-12!165;CL:0000988!3.05e-11!182;CL:0000763!1.93e-10!112;CL:0000049!1.93e-10!112;CL:0000063!3.39e-07!578;CL:0000134!9.31e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.35e-22;33!CL:0002057;5.35e-22;33!CL:0000576;8.24e-16;48!CL:0000473;2.28e-14;39!CL:0000234;2.28e-14;39!CL:0000766;6.29e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.75e-26,42;CL:0002057,1.75e-26,42;CL:0000473,1.14e-21,48;CL:0000234,1.14e-21,48;CL:0000557,7.80e-21,67;CL:0002009,8.33e-20,61;CL:0000738,2.98e-19,136;CL:0000839,3.91e-19,66;CL:0002194,1.61e-18,59;CL:0000576,1.61e-18,59;CL:0000040,1.61e-18,59;CL:0000559,1.61e-18,59;CL:0000766,5.04e-18,72;CL:0002031,1.34e-17,120;CL:0002087,1.41e-16,115;CL:0000037,1.30e-14,168;CL:0002032,2.50e-14,161;CL:0000837,2.50e-14,161;CL:0000988,4.48e-14,177;CL:0000763,9.30e-14,108;CL:0000049,9.30e-14,108;CL:0000134,1.56e-07,354;CL:0002320,9.79e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.20e-14!80;UBERON:0001474!1.27e-13!86;UBERON:0004765!1.35e-12!101;UBERON:0001434!1.35e-12!101;UBERON:0002390!1.48e-12!102;UBERON:0003061!1.48e-12!102;UBERON:0002405!3.68e-12!115;UBERON:0002193!1.12e-10!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.53e-18,76;UBERON:0001474,1.50e-17,82;UBERON:0002390,5.50e-17,98;UBERON:0003061,5.50e-17,98;UBERON:0004765,1.47e-16,90;UBERON:0001434,5.48e-15,100;UBERON:0002405,2.16e-14,93;UBERON:0002193,7.26e-14,108;UBERON:0002204,1.26e-07,167 | |||
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| |||
|short_description=p2@CUL1 | |||
}} |
Latest revision as of 00:46, 17 September 2015
Short description: | p2@CUL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CUL1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 52bp_to_ENST00000433865_5end |
EntrezGene: | CUL1 |
HGNC: | 2551 |
UniProt: | E7EWR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.75e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.75e-26 | 42 |
defensive cell | 1.14e-21 | 48 |
phagocyte | 1.14e-21 | 48 |
granulocyte monocyte progenitor cell | 7.80e-21 | 67 |
macrophage dendritic cell progenitor | 8.33e-20 | 61 |
leukocyte | 2.98e-19 | 136 |
myeloid lineage restricted progenitor cell | 3.91e-19 | 66 |
monopoietic cell | 1.61e-18 | 59 |
monocyte | 1.61e-18 | 59 |
monoblast | 1.61e-18 | 59 |
promonocyte | 1.61e-18 | 59 |
myeloid leukocyte | 5.04e-18 | 72 |
hematopoietic lineage restricted progenitor cell | 1.34e-17 | 120 |
nongranular leukocyte | 1.41e-16 | 115 |
hematopoietic stem cell | 1.30e-14 | 168 |
hematopoietic oligopotent progenitor cell | 2.50e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.50e-14 | 161 |
hematopoietic cell | 4.48e-14 | 177 |
myeloid cell | 9.30e-14 | 108 |
common myeloid progenitor | 9.30e-14 | 108 |
mesenchymal cell | 1.56e-07 | 354 |
connective tissue cell | 9.79e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.53e-18 | 76 |
bone element | 1.50e-17 | 82 |
hematopoietic system | 5.50e-17 | 98 |
blood island | 5.50e-17 | 98 |
skeletal element | 1.47e-16 | 90 |
skeletal system | 5.48e-15 | 100 |
immune system | 2.16e-14 | 93 |
hemolymphoid system | 7.26e-14 | 108 |
musculoskeletal system | 1.26e-07 | 167 |