FFCP PHASE1:Mm9::chr2:22478051..22478112,+: Difference between revisions
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{{FFCP|EntrezGene=14417|HGNC=|MCL_coexpression_id=251|UniProt=P48320,Q548L4,Q3URJ3|association_with_transcript=204bp_to_NM_008078,uc008ini.1,uc008inj.1,uc008ink.1_5end|description=CAGE_peak_1_at_Gad2_5end|id=chr2:22478051..22478112,+|ontology_enrichment_celltype=CL:0000117!1.81e-16!23;CL:0000337!1.81e-16!23;CL:0000540!3.37e-09!33;CL:0000047!3.37e-09!33;CL:0000031!3.37e-09!33;CL:0000404!3.37e-09!33;CL:0002319!9.82e-08!43;CL:0000221!2.42e-07!44;CL:0000133!2.42e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-19,23;CL:0000337,1.45e-19,23;CL:0000540,4.16e-11,33;CL:0000047,4.16e-11,33;CL:0000031,4.16e-11,33;CL:0000404,4.16e-11,33;CL:0000393,3.10e-08,39;CL:0000211,3.10e-08,39;CL:0002319,2.00e-07,43;CL:0000221,4.30e-07,44;CL:0000133,4.30e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!7.06e-31!63;UBERON:0001049!5.59e-28!52;UBERON:0005068!5.59e-28!52;UBERON:0006241!5.59e-28!52;UBERON:0007135!5.59e-28!52;UBERON:0000955!1.98e-27!50;UBERON:0006238!1.98e-27!50;UBERON:0002346!7.89e-27!71;UBERON:0003075!7.89e-27!71;UBERON:0007284!7.89e-27!71;UBERON:0002616!1.89e-26!49;UBERON:0003056!3.22e-26!49;UBERON:0000073!9.39e-26!75;UBERON:0001016!9.39e-26!75;UBERON:0001017!1.96e-25!73;UBERON:0005743!1.96e-25!73;UBERON:0004121!7.88e-23!102;UBERON:0000924!7.88e-23!102;UBERON:0006601!7.88e-23!102;UBERON:0002020!1.13e-21!34;UBERON:0003080!2.22e-21!40;UBERON:0002780!1.81e-20!39;UBERON:0001890!1.81e-20!39;UBERON:0006240!1.81e-20!39;UBERON:0007811!8.06e-19!86;UBERON:0002791!2.22e-18!29;UBERON:0003528!2.22e-18!29;UBERON:0001893!2.22e-18!29;UBERON:0000153!7.03e-16!94;UBERON:0000956!2.09e-12!21;UBERON:0001869!2.09e-12!21;UBERON:0000203!2.09e-12!21;UBERON:0002619!2.14e-10!17;UBERON:0002021!5.25e-09!10;UBERON:0000411!5.25e-09!10;UBERON:0001950!5.25e-09!10;UBERON:0002420!2.84e-07!8;UBERON:0007245!2.84e-07!8;UBERON:0010009!2.84e-07!8;UBERON:0010011!2.84e-07!8;UBERON:0000454!2.84e-07!8;UBERON:0003076!4.64e-07!12;UBERON:0003057!4.64e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.51e-32,64;UBERON:0003075,2.51e-32,64;UBERON:0007284,2.51e-32,64;UBERON:0000073,3.08e-32,54;UBERON:0001049,7.36e-30,52;UBERON:0005068,7.36e-30,52;UBERON:0006241,7.36e-30,52;UBERON:0007135,7.36e-30,52;UBERON:0003056,1.64e-26,49;UBERON:0002020,3.31e-26,34;UBERON:0001017,3.39e-26,73;UBERON:0010371,5.46e-26,73;UBERON:0000955,5.66e-26,47;UBERON:0006238,5.66e-26,47;UBERON:0001016,5.39e-25,75;UBERON:0002616,7.30e-25,46;UBERON:0004121,3.70e-24,95;UBERON:0000924,3.70e-24,95;UBERON:0006601,3.70e-24,95;UBERON:0003528,3.24e-22,29;UBERON:0002791,3.24e-22,29;UBERON:0001893,3.24e-22,29;UBERON:0003080,7.24e-22,40;UBERON:0002780,8.19e-21,39;UBERON:0001890,8.19e-21,39;UBERON:0006240,8.19e-21,39;UBERON:0010314,7.51e-17,92;UBERON:0000956,5.65e-15,21;UBERON:0001869,5.65e-15,21;UBERON:0000203,5.65e-15,21;UBERON:0002619,1.51e-12,17;UBERON:0002021,1.49e-10,10;UBERON:0000411,1.49e-10,10;UBERON:0001950,1.49e-10,10;UBERON:0002420,1.83e-08,8;UBERON:0007245,1.83e-08,8;UBERON:0010009,1.83e-08,8;UBERON:0010011,1.83e-08,8;UBERON:0000454,1.83e-08,8;UBERON:0003076,2.35e-08,12;UBERON:0003057,2.35e-08,12|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.467225281191051,0.258246646883153,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0.174840804837995,0,0,0,0,0,0,9.69493507722195,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1554064790051,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0,0,0,0,0,0,0,0,0,0,12.5436205732951,15.869729378161,16.4796164911607,0,0,0,0,0,0.299600110518405,0.768436610643109,2.07379224616955,4.3201900266141,3.15487442027073,13.9968982357864,14.1355866209033,39.5645281464302,38.4340338783128,39.5264078242309,63.8672109796454,38.5615761017267,55.7591715720164,12.6610836220986,9.05727671663856,15.106487746146,41.3190838522044,35.4540444319958,34.8380004931127,23.8649154233671,19.9320353118744,10.4383689662168,0.151452386666368,0.529000920747499,0,0,0,0,0,0,2.52799956237153,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0.173485326766136,0.608930956624282,0,0,0,0,0,0,0,0,0,0,0,21.6657789788545,22.6202443358531,0,0,0,0,70.102019241457,134.047676625858,49.8847777888072,42.0654854865309,37.5901722275586,79.1672449771924,87.7725233196569,0,0,0,2.73574412652416,0.650602214813519,3.90833577536904,4.14142898552303,6.48030716693575,14.1515918234762,11.7864622662062,9.0890672822937,6.98499100995342,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0.116765342367169,0,0,0,0,0,0,34.697841513081,9.46722433889417,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,35.0000286173386,34.1086007983311,0,0,0,0,0,0,0,0,0,0,0,130.135133150832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12791290356818,2.16073312837572,0.129358683782755,0,0.532020700926821,0.356737635204141,0.329098041204242,1.2178597964584,0,0,0.220528398054962,0,0,0,0,0,0,25.0324157714188,0,0,0,0,0,0,0.849892149969277,2.6590775941495,1.93479963326193,0,0.158167996790568,0,0,0,0,0,0,0,0.129614973291793,0,3.94585057078933,0,0,0,0,0,0,0,0,0,4.03242008761012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,28.0880378259804,48.5686584650677,47.4134993602392,43.5400590213941,29.5587473631143,32.8839609489908,34.7481192799262,29.7009900101995,29.2708782095743,27.1885445390523,39.3497836931383,0.62272408550506,3.59122386060928,2.73173769206615,0.729320151204882,2.93458427679175,2.5738091183002,2.889207461421,3.29656091582231,4.1719497246936,1.26348605881899,2.5347929989024,3.2066478035633,1.03005658216871,2.36893063898016,2.23998328926892,3.33405583898152,2.43357084484197,2.31491064556446,1.64834360321323,3.09117732282234,2.40008476669791,1.77475806159337,2.62279808942053,2.0348498328526,3.10560955370591,2.70766745253365,2.92684756596436,2.10455769150274,2.8518863907631,5.61142271657738,1.89816028998679,1.97008964751127,1.22769312950907,2.94379998253335,1.35034627686799,4.24677982494508,1.40358965067245,2.14871054048298,1.53030665655075,1.32354851471709,0.695603506861264|short_description=p1@Gad2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14417 | |||
|HGNC= | |||
|MCL_coexpression_id=251 | |||
|TSSclassifier=NA | |||
|UniProt=P48320,Q548L4,Q3URJ3 | |||
|association_with_transcript=204bp_to_NM_008078,uc008ini.1,uc008inj.1,uc008ink.1_5end | |||
|cluster_id=chr2:22478051..22478112,+ | |||
|description=CAGE_peak_1_at_Gad2_5end | |||
|id=chr2:22478051..22478112,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.81e-16!23;CL:0000337!1.81e-16!23;CL:0000540!3.37e-09!33;CL:0000047!3.37e-09!33;CL:0000031!3.37e-09!33;CL:0000404!3.37e-09!33;CL:0002319!9.82e-08!43;CL:0000221!2.42e-07!44;CL:0000133!2.42e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-19,23;CL:0000337,1.45e-19,23;CL:0000540,4.16e-11,33;CL:0000047,4.16e-11,33;CL:0000031,4.16e-11,33;CL:0000404,4.16e-11,33;CL:0000393,3.10e-08,39;CL:0000211,3.10e-08,39;CL:0002319,2.00e-07,43;CL:0000221,4.30e-07,44;CL:0000133,4.30e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.06e-31!63;UBERON:0001049!5.59e-28!52;UBERON:0005068!5.59e-28!52;UBERON:0006241!5.59e-28!52;UBERON:0007135!5.59e-28!52;UBERON:0000955!1.98e-27!50;UBERON:0006238!1.98e-27!50;UBERON:0002346!7.89e-27!71;UBERON:0003075!7.89e-27!71;UBERON:0007284!7.89e-27!71;UBERON:0002616!1.89e-26!49;UBERON:0003056!3.22e-26!49;UBERON:0000073!9.39e-26!75;UBERON:0001016!9.39e-26!75;UBERON:0001017!1.96e-25!73;UBERON:0005743!1.96e-25!73;UBERON:0004121!7.88e-23!102;UBERON:0000924!7.88e-23!102;UBERON:0006601!7.88e-23!102;UBERON:0002020!1.13e-21!34;UBERON:0003080!2.22e-21!40;UBERON:0002780!1.81e-20!39;UBERON:0001890!1.81e-20!39;UBERON:0006240!1.81e-20!39;UBERON:0007811!8.06e-19!86;UBERON:0002791!2.22e-18!29;UBERON:0003528!2.22e-18!29;UBERON:0001893!2.22e-18!29;UBERON:0000153!7.03e-16!94;UBERON:0000956!2.09e-12!21;UBERON:0001869!2.09e-12!21;UBERON:0000203!2.09e-12!21;UBERON:0002619!2.14e-10!17;UBERON:0002021!5.25e-09!10;UBERON:0000411!5.25e-09!10;UBERON:0001950!5.25e-09!10;UBERON:0002420!2.84e-07!8;UBERON:0007245!2.84e-07!8;UBERON:0010009!2.84e-07!8;UBERON:0010011!2.84e-07!8;UBERON:0000454!2.84e-07!8;UBERON:0003076!4.64e-07!12;UBERON:0003057!4.64e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.51e-32,64;UBERON:0003075,2.51e-32,64;UBERON:0007284,2.51e-32,64;UBERON:0000073,3.08e-32,54;UBERON:0001049,7.36e-30,52;UBERON:0005068,7.36e-30,52;UBERON:0006241,7.36e-30,52;UBERON:0007135,7.36e-30,52;UBERON:0003056,1.64e-26,49;UBERON:0002020,3.31e-26,34;UBERON:0001017,3.39e-26,73;UBERON:0010371,5.46e-26,73;UBERON:0000955,5.66e-26,47;UBERON:0006238,5.66e-26,47;UBERON:0001016,5.39e-25,75;UBERON:0002616,7.30e-25,46;UBERON:0004121,3.70e-24,95;UBERON:0000924,3.70e-24,95;UBERON:0006601,3.70e-24,95;UBERON:0003528,3.24e-22,29;UBERON:0002791,3.24e-22,29;UBERON:0001893,3.24e-22,29;UBERON:0003080,7.24e-22,40;UBERON:0002780,8.19e-21,39;UBERON:0001890,8.19e-21,39;UBERON:0006240,8.19e-21,39;UBERON:0010314,7.51e-17,92;UBERON:0000956,5.65e-15,21;UBERON:0001869,5.65e-15,21;UBERON:0000203,5.65e-15,21;UBERON:0002619,1.51e-12,17;UBERON:0002021,1.49e-10,10;UBERON:0000411,1.49e-10,10;UBERON:0001950,1.49e-10,10;UBERON:0002420,1.83e-08,8;UBERON:0007245,1.83e-08,8;UBERON:0010009,1.83e-08,8;UBERON:0010011,1.83e-08,8;UBERON:0000454,1.83e-08,8;UBERON:0003076,2.35e-08,12;UBERON:0003057,2.35e-08,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.467225281191051,0.258246646883153,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0.174840804837995,0,0,0,0,0,0,9.69493507722195,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1554064790051,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0,0,0,0,0,0,0,0,0,0,12.5436205732951,15.869729378161,16.4796164911607,0,0,0,0,0,0.299600110518405,0.768436610643109,2.07379224616955,4.3201900266141,3.15487442027073,13.9968982357864,14.1355866209033,39.5645281464302,38.4340338783128,39.5264078242309,63.8672109796454,38.5615761017267,55.7591715720164,12.6610836220986,9.05727671663856,15.106487746146,41.3190838522044,35.4540444319958,34.8380004931127,23.8649154233671,19.9320353118744,10.4383689662168,0.151452386666368,0.529000920747499,0,0,0,0,0,0,2.52799956237153,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0.173485326766136,0.608930956624282,0,0,0,0,0,0,0,0,0,0,0,21.6657789788545,22.6202443358531,0,0,0,0,70.102019241457,134.047676625858,49.8847777888072,42.0654854865309,37.5901722275586,79.1672449771924,87.7725233196569,0,0,0,2.73574412652416,0.650602214813519,3.90833577536904,4.14142898552303,6.48030716693575,14.1515918234762,11.7864622662062,9.0890672822937,6.98499100995342,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0.116765342367169,0,0,0,0,0,0,34.697841513081,9.46722433889417,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,35.0000286173386,34.1086007983311,0,0,0,0,0,0,0,0,0,0,0,130.135133150832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12791290356818,2.16073312837572,0.129358683782755,0,0.532020700926821,0.356737635204141,0.329098041204242,1.2178597964584,0,0,0.220528398054962,0,0,0,0,0,0,25.0324157714188,0,0,0,0,0,0,0.849892149969277,2.6590775941495,1.93479963326193,0,0.158167996790568,0,0,0,0,0,0,0,0.129614973291793,0,3.94585057078933,0,0,0,0,0,0,0,0,0,4.03242008761012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,28.0880378259804,48.5686584650677,47.4134993602392,43.5400590213941,29.5587473631143,32.8839609489908,34.7481192799262,29.7009900101995,29.2708782095743,27.1885445390523,39.3497836931383,0.62272408550506,3.59122386060928,2.73173769206615,0.729320151204882,2.93458427679175,2.5738091183002,2.889207461421,3.29656091582231,4.1719497246936,1.26348605881899,2.5347929989024,3.2066478035633,1.03005658216871,2.36893063898016,2.23998328926892,3.33405583898152,2.43357084484197,2.31491064556446,1.64834360321323,3.09117732282234,2.40008476669791,1.77475806159337,2.62279808942053,2.0348498328526,3.10560955370591,2.70766745253365,2.92684756596436,2.10455769150274,2.8518863907631,5.61142271657738,1.89816028998679,1.97008964751127,1.22769312950907,2.94379998253335,1.35034627686799,4.24677982494508,1.40358965067245,2.14871054048298,1.53030665655075,1.32354851471709,0.695603506861264 | |||
|short_description=p1@Gad2 | |||
}} |
Latest revision as of 09:06, 26 September 2015
Short description: | p1@Gad2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gad2_5end |
Coexpression cluster: | MCL_coexpression_mm9:251 |
Association with transcript: | 204bp_to_NM_008078, uc008ini.1, uc008inj.1, uc008ink.1_5end |
EntrezGene: | Gad2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.45e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.45e-19 | 23 |
neuron | 4.16e-11 | 33 |
neuronal stem cell | 4.16e-11 | 33 |
neuroblast | 4.16e-11 | 33 |
electrically signaling cell | 4.16e-11 | 33 |
electrically responsive cell | 3.10e-08 | 39 |
electrically active cell | 3.10e-08 | 39 |
neural cell | 2.00e-07 | 43 |
ectodermal cell | 4.30e-07 | 44 |
neurectodermal cell | 4.30e-07 | 44 |