FFCP PHASE1:Hg19::chr7:128050027..128050053,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3614 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6052 | |||
|TSSclassifier=strong | |||
|UniProt=P20839,F8WDE9,C9K0R9,A4D0Z6,B3KRZ3,B3KVM8,C9JV30,Q6ZNB1 | |||
|association_with_transcript=0bp_to_ENST00000343214,ENST00000348127,ENST00000354269,ENST00000473463,ENST00000491376,ENST00000497868,NM_000883,NM_001102605,NM_001142576,NM_183243,uc003vmu.2,uc003vmv.2,uc003vmw.2,uc003vmx.2,uc003vmy.2,uc011kon.1_5end | |||
|cluster_id=chr7:128050027..128050053,- | |||
|coexpression_cluster_id=C3790 | |||
|description=CAGE_peak_2_at_IMPDH1_5end | |||
|id=chr7:128050027..128050053,- | |||
|ontology_enrichment_celltype=CL:0000766!5.46e-29!76;CL:0002194!6.67e-27!63;CL:0000576!6.67e-27!63;CL:0000040!6.67e-27!63;CL:0000559!6.67e-27!63;CL:0000738!1.22e-26!140;CL:0002009!1.77e-26!65;CL:0002087!4.72e-26!119;CL:0002057!1.13e-24!42;CL:0000557!2.22e-23!71;CL:0000839!9.01e-22!70;CL:0002031!3.14e-21!124;CL:0000860!3.25e-21!45;CL:0002032!9.15e-19!165;CL:0000837!9.15e-19!165;CL:0000037!3.32e-18!172;CL:0000566!3.32e-18!172;CL:0000988!4.33e-17!182;CL:0000763!9.66e-17!112;CL:0000049!9.66e-17!112;CL:0000134!8.31e-15!358;CL:0002320!1.40e-14!365;CL:0002371!3.50e-14!591;CL:0000723!2.77e-12!436;CL:0000219!2.92e-12!390;CL:0000048!3.28e-12!430;CL:0000034!1.21e-10!444;CL:0000144!9.93e-08!625;CL:0002393!6.66e-07!9;CL:0002397!6.66e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.73e-18;39!CL:0000234;4.73e-18;39!CL:0000576;1.24e-17;48!CL:0000860;1.37e-17;33!CL:0002057;1.37e-17;33!CL:0000766;4.85e-14;69!CL:0002087;1.82e-08;104!CL:0000738;3.19e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.29e-32,72;CL:0002194,5.28e-30,59;CL:0000576,5.28e-30,59;CL:0000040,5.28e-30,59;CL:0000559,5.28e-30,59;CL:0002009,1.83e-29,61;CL:0000473,1.47e-28,48;CL:0000234,1.47e-28,48;CL:0000738,2.83e-28,136;CL:0002087,6.85e-28,115;CL:0000557,6.74e-26,67;CL:0000860,1.13e-24,42;CL:0002057,1.13e-24,42;CL:0000839,3.82e-24,66;CL:0002031,9.75e-23,120;CL:0002032,6.66e-20,161;CL:0000837,6.66e-20,161;CL:0000037,2.84e-19,168;CL:0000763,4.13e-18,108;CL:0000049,4.13e-18,108;CL:0000988,6.20e-18,177;CL:0000134,2.00e-15,354;CL:0002320,3.47e-15,361;CL:0000723,5.03e-13,433;CL:0000048,5.96e-13,427;CL:0000219,8.63e-13,386;CL:0000034,2.52e-11,441;CL:0002393,6.66e-07,9;CL:0002397,6.66e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.47e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.54e-26!102;UBERON:0003061!5.54e-26!102;UBERON:0002193!5.84e-23!112;UBERON:0002371!2.51e-22!80;UBERON:0003081!1.02e-21!216;UBERON:0001474!1.13e-20!86;UBERON:0004765!3.25e-16!101;UBERON:0001434!3.25e-16!101;UBERON:0002384!2.42e-14!375;UBERON:0002405!1.46e-13!115;UBERON:0002204!1.44e-12!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.80e-28,98;UBERON:0003061,4.80e-28,98;UBERON:0002193,1.03e-24,108;UBERON:0002371,1.54e-24,76;UBERON:0001474,1.20e-22,82;UBERON:0003081,4.93e-21,203;UBERON:0002405,6.72e-20,93;UBERON:0004765,4.23e-19,90;UBERON:0001434,6.50e-17,100;UBERON:0002384,6.17e-15,371;UBERON:0000926,1.16e-13,315;UBERON:0004120,1.16e-13,315;UBERON:0006603,1.16e-13,315;UBERON:0002204,2.77e-13,167 | |||
|phase1_expression=9.81063248061006,11.7755288140041,5.07435854745496,17.0124607200322,15.1966772105278,12.2127393374052,35.4619829435635,9.47579810140246,10.9697963843932,13.2696325710815,53.0328887659045,12.66959958355,18.1999214977633,4.45558870656168,6.2965501388304,5.3786011716142,4.82155622419182,6.57279081348636,2.43966399395253,2.83178433576612,3.4680117511523,5.64218498660558,3.14859585844162,3.96935832711364,3.64073654824928,2.13957536094264,0.985207073399349,1.10195093839151,25.1753137183299,20.7267874972495,46.5996531181389,22.9855306119732,28.0121504463773,17.0086844676722,1.78174561334694,1.56386155736164,7.34001098337118,76.4513663773991,74.6025344588927,72.2646199483787,40.7526163116662,30.1221109397651,39.1514862803964,43.764869872649,34.0088349319929,43.1799628914313,29.9833457608333,36.1827741459207,24.4668033007132,33.9477022940138,42.2665165773016,29.5602787360732,37.922024881028,41.9565044329487,37.9194162464157,35.0130751549245,26.1989904055532,17.9778787556068,29.9962214523485,28.8836124368484,20.4587880255693,39.9120073225927,45.2782502801104,40.4913513006059,35.1153178740587,38.0148100543064,24.912889959823,42.4610244283896,47.9764284946585,32.5783267057675,27.848377121135,29.4622108790052,24.684066220389,42.8848231213242,43.3712771928689,41.3027531651501,60.3204749256679,63.0742949934327,43.8780851683029,33.6315037614673,34.2136684782435,38.907464751867,10.5597746676794,17.4764355603882,13.3426388079533,15.3622880123943,16.4162354684765,13.2193061189531,16.5261218196216,12.4026988089597,17.0763890732835,24.6639619535794,22.9363936875137,5.28685314316103,6.72610275577843,4.74091352595139,10.622327586147,14.1483874589699,15.6257139239627,18.0561415021932,10.4295125322749,11.3627473376336,13.6378709885538,13.7034861968763,11.4896303915187,9.74749136167933,10.2905468230706,20.110337196931,20.0291395242213,19.4036727432338,19.6208512627952,13.0411388580774,9.49034004237187,14.7147455449342,19.8617495229456,14.8435238933812,17.2449222120865,12.7142154828573,12.1449452169361,17.2025323735012,13.0216690771284,18.0585888445191,15.9609626222439,15.4863799496846,16.240994451805,18.7054029114773,22.9915839137893,12.2980113367087,20.3254548795466,15.4962112154595,21.9426179682566,10.7312137552582,7.41602858692476,6.50590474292219,4.51204119572301,7.82171202388448,2.3858578411533,7.78615792484217,1.89069634328136,1.77383517970051,3.33772185633879,5.43563163315507,21.49342200926,18.5392221392215,35.7002133020152,29.2537958662769,42.1476734844803,4.05434061319081,2.28797964312051,1.48583000531826,4.17401055470081,13.763753521698,10.4142150482278,5.6530794192401,7.55098985177831,8.80377734208216,2.50793959844173,2.06733407335463,5.69226020298736,4.68608857870538,7.65375702507379,4.56163263431108,8.7862340717341,4.04429388380456,12.9622711661082,2.67899184852239,3.59246996201872,5.18012810223282,13.7984973719295,10.4419222552494,7.69447324507711,102.788725600129,143.47869773488,13.9550096685611,6.46063537203914,4.55869841992487,2.25095607382472,9.75244510545967,9.22137793715728,4.48542080113846,13.8773694448616,11.3467072271894,4.97937656639626,8.75619368452972,8.17309515567294,4.8434376846378,9.21881479167998,6.09235722767871,7.49184184392769,11.9799082524334,7.47243402759005,4.57994544710683,9.55050371771976,7.44389275521917,6.73708765141148,9.5810767503179,9.19599452464312,7.12801714369232,6.42894016124248,12.7422590671324,26.5888712472008,7.23845290002485,7.88246675193374,6.64953877162039,10.5354629011401,7.35570709917647,6.61047459189026,6.01190570748112,6.45802688479903,5.97960688691989,7.41761654058466,5.10154863343484,6.18315175430633,6.69865404118636,9.86419338557426,4.55696097051419,7.98983442321829,6.05841058185875,6.99579229681475,5.65761198865842,5.68015348026583,5.54136540252021,8.98671139245584,11.5956511897978,10.0916064618609,11.1853792201711,1.34171076742555,2.51806559810822,1.51052125730374,1.65857688024593,2.77552935963191,3.28479623168247,1.56449532329816,4.5026865673502,17.9575397758225,11.1448302727675,9.38443326170461,2.12952240071719,3.20310911148393,1.92808823906786,3.41911315470421,2.39667388501647,2.60997681022206,3.23595139584395,1.37355025587742,0.38474715694639,11.8104872739944,23.8411015465858,15.6398124305932,24.9914809355421,2.53510069643662,5.89696330006576,2.95394953340702,0.882926198829301,5.90344505006945,6.34800898104545,7.57276969319516,12.3641928583382,10.6560710756329,9.16625607069443,7.49359102213747,19.758760920312,4.3299402607582,3.36198174427723,2.46558257895225,2.7429625074604,2.31492756288305,1.90254152234598,14.223679163267,18.8866955660872,42.3493250470323,39.0787122782527,44.292086362041,2.81201501960331,3.35964256397719,5.95455408418023,3.22410681730254,3.77824120068151,15.7186898457737,2.46331618947972,5.28290604079356,5.59785911960085,5.90891809009542,9.84690980725764,13.3345578013555,27.1211782146377,18.7547915536075,23.9501424431787,17.5835012522683,19.2219557020107,12.2905366031149,3.02753927732474,2.1798003441664,1.6134422880609,6.2050423563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| |||
|short_description=p2@IMPDH1 | |||
}} |
Latest revision as of 03:31, 16 September 2015
Short description: | p2@IMPDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IMPDH1_5end |
Coexpression cluster: | C3790_Neutrophils_Eosinophils_Mesenchymal_Whole_Alveolar_blood_CD14 |
Association with transcript: | 0bp_to_ENST00000343214, ENST00000348127, ENST00000354269, ENST00000473463, ENST00000491376, ENST00000497868, NM_000883, NM_001102605, NM_001142576, NM_183243, uc003vmu.2, uc003vmv.2, uc003vmw.2, uc003vmx.2, uc003vmy.2, uc011kon.1_5end |
EntrezGene: | IMPDH1 |
HGNC: | 6052 |
UniProt: | P20839F8WDE9C9K0R9A4D0Z6B3KRZ3B3KVM8C9JV30Q6ZNB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.29e-32 | 72 |
monopoietic cell | 5.28e-30 | 59 |
monocyte | 5.28e-30 | 59 |
monoblast | 5.28e-30 | 59 |
promonocyte | 5.28e-30 | 59 |
macrophage dendritic cell progenitor | 1.83e-29 | 61 |
defensive cell | 1.47e-28 | 48 |
phagocyte | 1.47e-28 | 48 |
leukocyte | 2.83e-28 | 136 |
nongranular leukocyte | 6.85e-28 | 115 |
granulocyte monocyte progenitor cell | 6.74e-26 | 67 |
classical monocyte | 1.13e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-24 | 42 |
myeloid lineage restricted progenitor cell | 3.82e-24 | 66 |
hematopoietic lineage restricted progenitor cell | 9.75e-23 | 120 |
hematopoietic oligopotent progenitor cell | 6.66e-20 | 161 |
hematopoietic multipotent progenitor cell | 6.66e-20 | 161 |
hematopoietic stem cell | 2.84e-19 | 168 |
myeloid cell | 4.13e-18 | 108 |
common myeloid progenitor | 4.13e-18 | 108 |
hematopoietic cell | 6.20e-18 | 177 |
mesenchymal cell | 2.00e-15 | 354 |
connective tissue cell | 3.47e-15 | 361 |
somatic stem cell | 5.03e-13 | 433 |
multi fate stem cell | 5.96e-13 | 427 |
motile cell | 8.63e-13 | 386 |
stem cell | 2.52e-11 | 441 |
intermediate monocyte | 6.66e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.66e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.80e-28 | 98 |
blood island | 4.80e-28 | 98 |
hemolymphoid system | 1.03e-24 | 108 |
bone marrow | 1.54e-24 | 76 |
bone element | 1.20e-22 | 82 |
lateral plate mesoderm | 4.93e-21 | 203 |
immune system | 6.72e-20 | 93 |
skeletal element | 4.23e-19 | 90 |
skeletal system | 6.50e-17 | 100 |
connective tissue | 6.17e-15 | 371 |
mesoderm | 1.16e-13 | 315 |
mesoderm-derived structure | 1.16e-13 | 315 |
presumptive mesoderm | 1.16e-13 | 315 |
musculoskeletal system | 2.77e-13 | 167 |