FFCP PHASE1:Hg19::chr7:1272522..1272537,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340260 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33194 | |||
|TSSclassifier=strong | |||
|UniProt=A6NJT0 | |||
|association_with_transcript=-5bp_to_ENST00000316333_5end | |||
|cluster_id=chr7:1272522..1272537,+ | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_2_at_UNCX_5end | |||
|id=chr7:1272522..1272537,+ | |||
|ontology_enrichment_celltype=CL:0000242!5.34e-12!2;CL:0000333!3.62e-10!41;CL:0000095!1.63e-09!17;CL:0000123!1.63e-09!17;CL:0002319!1.02e-08!25;CL:0000133!4.11e-08!59;CL:0002603!9.88e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.31e-34;2!CL:0000242;1.31e-34;2!CL:0002319;1.87e-15;25!CL:0000312;1.72e-14;5!CL:0000095;1.99e-14;17!CL:0000240;3.08e-12;6!CL:0000311;3.08e-12;6!CL:0000079;3.08e-12;6!CL:0000237;3.08e-12;6!CL:0000362;1.83e-08;9!CL:0000214;9.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.31e-34,2;CL:0002319,1.90e-15,25;CL:0000312,1.72e-14,5;CL:0000095,1.99e-14,17;CL:0000123,1.99e-14,17;CL:0000240,3.08e-12,6;CL:0000311,3.08e-12,6;CL:0000079,3.08e-12,6;CL:0000237,3.08e-12,6;CL:0000036,3.08e-12,6;CL:0000357,3.08e-12,6;CL:0000114,3.08e-12,6;CL:0000362,1.83e-08,9;CL:0000133,7.57e-07,59;CL:0000214,9.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.40e-50;3!CL:0000357;3.08e-12;6!CL:0000114;3.08e-12;6!UBERON:0003918;1.65e-07;10!UBERON:0007687;1.65e-07;10!UBERON:0006238;5.64e-07;10!UBERON:0003056;6.14e-07;3 | |||
|ontology_enrichment_disease=DOID:3095!1.36e-07!22;DOID:2994!1.36e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!1.85e-46!15;UBERON:0003057!1.85e-46!15;UBERON:0004733!5.60e-41!12;UBERON:0002028!5.60e-41!12;UBERON:0007277!5.60e-41!12;UBERON:0004732!1.10e-37!13;UBERON:0002680!9.90e-36!9;UBERON:0001895!9.90e-36!9;UBERON:0010092!9.90e-36!9;UBERON:0002037!7.25e-22!6;UBERON:0006215!7.25e-22!6;UBERON:0000073!3.39e-20!94;UBERON:0001016!3.39e-20!94;UBERON:0005743!1.89e-18!86;UBERON:0001017!1.62e-17!82;UBERON:0001049!3.10e-16!57;UBERON:0005068!3.10e-16!57;UBERON:0006241!3.10e-16!57;UBERON:0007135!3.10e-16!57;UBERON:0000988!7.72e-16!3;UBERON:0002346!1.20e-15!90;UBERON:0002298!1.48e-15!8;UBERON:0003075!1.06e-14!86;UBERON:0007284!1.06e-14!86;UBERON:0000955!7.43e-13!69;UBERON:0006238!7.43e-13!69;UBERON:0000924!1.88e-12!173;UBERON:0006601!1.88e-12!173;UBERON:0004121!1.21e-11!169;UBERON:0002616!1.63e-11!59;UBERON:0002148!5.83e-11!2;UBERON:0009662!5.83e-11!2;UBERON:0006331!1.38e-07!3;UBERON:0001896!1.48e-07!3;UBERON:0005290!1.48e-07!3;UBERON:0010096!1.48e-07!3;UBERON:0002240!1.69e-07!3;UBERON:0000033!6.70e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.60e-25;6!UBERON:0002680;2.91e-17;9!UBERON:0001895;2.91e-17;9!UBERON:0004733;4.09e-13;12!UBERON:0002028;4.09e-13;12!UBERON:0004732;3.73e-12;13!UBERON:0006915;9.12e-07;3!UBERON:0007616;9.12e-07;3!UBERON:0002217;9.12e-07;3!UBERON:0002018;9.12e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.67e-25,6;UBERON:0006215,1.67e-25,6;UBERON:0002680,2.99e-17,9;UBERON:0001895,2.99e-17,9;UBERON:0010092,2.99e-17,9;UBERON:0004733,4.18e-13,12;UBERON:0002028,4.18e-13,12;UBERON:0007277,4.18e-13,12;UBERON:0004732,3.81e-12,13;UBERON:0003076,1.31e-10,15;UBERON:0003057,1.31e-10,15;UBERON:0001017,5.69e-07,81;UBERON:0006915,9.12e-07,3;UBERON:0007616,9.12e-07,3;UBERON:0002217,9.12e-07,3;UBERON:0002018,9.12e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.725627385107593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89486746482929,0,0,0,0,6.10326945268333,11.0579259931225,9.16197618755997,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9542044523884,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,7.81573363211472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.310482014706917,2.35192679391592,0,0,0,0,13.5817122683996,37.6794674388145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.247871528518004,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.883606528698812,0,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,20.0677286900563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,3.94428905482962,0.0679914901909147,0,0,0,0,0,0,0,0.380095503034311,0,0.534434810531121,0,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@UNCX | |||
}} |
Latest revision as of 02:26, 16 September 2015
Short description: | p2@UNCX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UNCX_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | -5bp_to_ENST00000316333_5end |
EntrezGene: | UNCX |
HGNC: | 33194 |
UniProt: | A6NJT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.31e-34 | 2 |
neural cell | 1.90e-15 | 25 |
keratinocyte | 1.72e-14 | 5 |
neuron associated cell | 1.99e-14 | 17 |
neuron associated cell (sensu Vertebrata) | 1.99e-14 | 17 |
stratified squamous epithelial cell | 3.08e-12 | 6 |
keratin accumulating cell | 3.08e-12 | 6 |
stratified epithelial cell | 3.08e-12 | 6 |
keratinizing barrier epithelial cell | 3.08e-12 | 6 |
epithelial fate stem cell | 3.08e-12 | 6 |
stratified epithelial stem cell | 3.08e-12 | 6 |
surface ectodermal cell | 3.08e-12 | 6 |
epidermal cell | 1.83e-08 | 9 |
neurectodermal cell | 7.57e-07 | 59 |
synovial cell | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.67e-25 | 6 |
rhombic lip | 1.67e-25 | 6 |
regional part of metencephalon | 2.99e-17 | 9 |
metencephalon | 2.99e-17 | 9 |
future metencephalon | 2.99e-17 | 9 |
segmental subdivision of hindbrain | 4.18e-13 | 12 |
hindbrain | 4.18e-13 | 12 |
presumptive hindbrain | 4.18e-13 | 12 |
segmental subdivision of nervous system | 3.81e-12 | 13 |
posterior neural tube | 1.31e-10 | 15 |
chordal neural plate | 1.31e-10 | 15 |
central nervous system | 5.69e-07 | 81 |
stratified squamous epithelium | 9.12e-07 | 3 |
layer of synovial tissue | 9.12e-07 | 3 |
synovial joint | 9.12e-07 | 3 |
synovial membrane of synovial joint | 9.12e-07 | 3 |