FFCP PHASE1:Mm9::chr2:163223649..163223680,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=59091|HGNC=|MCL_coexpression_id=35|UniProt=Q9ET78|association_with_transcript=4bp_to_ENSMUST00000017961_5end|description=CAGE_peak_2_at_Jph2_5end|id=chr2:163223649..163223680,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!3.23e-14!23;UBERON:0001009!3.23e-14!23;UBERON:0007100!2.35e-13!18;UBERON:0000948!2.35e-13!18;UBERON:0005498!2.35e-13!18;UBERON:0004140!2.35e-13!18;UBERON:0009881!2.35e-13!18;UBERON:0004141!2.35e-13!18;UBERON:0003084!2.35e-13!18;UBERON:0007005!2.35e-13!18;UBERON:0004139!2.35e-13!18;UBERON:0004291!2.35e-13!18;UBERON:0004872!9.61e-11!33;UBERON:0003103!1.16e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.55e-16,23;UBERON:0001009,4.55e-16,23;UBERON:0007100,5.98e-16,18;UBERON:0000948,5.98e-16,18;UBERON:0005498,5.98e-16,18;UBERON:0004140,5.98e-16,18;UBERON:0009881,5.98e-16,18;UBERON:0004141,5.98e-16,18;UBERON:0003084,5.98e-16,18;UBERON:0007005,5.98e-16,18;UBERON:0004139,5.98e-16,18;UBERON:0004291,5.98e-16,18;UBERON:0004872,2.07e-09,33;UBERON:0003103,3.32e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27331726736501,1.72340783073175,3.85448179539531,0,0,0.439372365468944,0.58328969722285,0,0,0,0,0,8.7468208252222,8.88253663810146,3.09403255366465,0,0,0,0.677689064138264,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,11.5164424508037,0.170430322578058,0,0,0,1.28326477414318,0,0,0.216491041011214,0,0,2.16949371466214,0,0.593768556259299,0.346970653532272,0.608930956624282,0.691846491768175,0.753613202763113,0.823120949949934,1.0053327306374,2.22475470960936,6.50697106139602,7.07688441559899,9.54424414689714,14.575540218386,10.6672555689749,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0.162241263067758,0.81471491080253,5.72272064806428,0,1.05220927943237,0.520481771850815,0.229902104433473,0.540186389416048,1.20563854268572,0.816437989815934,0.640568601424249,1.49922759295566,1.29351685369508,0,0.567318240503458,1.23165786914764,1.97276159184817,0.834141747676794,0.696504333044333,1.02891068203972,0.199034266818493,0,0,0,19.0555710732662,14.7751417788091,19.0865785148676,14.9149183418682,16.9217239302767,18.8205877722601,20.6955210827863,26.0225199357631,21.6015883379264,27.8106146353782,31.027650710949,39.3994414392859,50.7313956365903,48.7401255946132,34.6252560401759,0,0.205809224758569,0,0.528901133327089,1.2797295032114,2.78684006232526,3.73715637834071,2.21851877085677,2.00140239460383,2.66315876557583,3.79623249235609,2.30578536613615,3.77002813200404,3.97912944082302,2.9244613067868,6.29173586057955,3.02593269824572,1.59313018603494,0.189667900953082,1.25673363870702,1.1270773567308,1.4255592949172,0.581857461502877,1.05203729835478,1.07502113111237,0.590440591918409,0,0.493588655687202,0,1.33476084572875,0,0,0,0,0,0.575392274901621,0,0,0,0.744281895337007,0.312037673114561,0.252578877947112,0.538192240565737,0,1.84753190166605,3.60033682363921,3.42226450528254,2.03694102930226,1.40814148973101,3.35012514883632,1.6663054862021,3.90267295715598,2.67979744980525,4.20782910332672,5.74037167166954,3.27726629431476,3.7990696010497,1.3018415272336,0,0,0.983528546038072,1.93155722413313,0,0,0,61.0979643834583,0,0,0,0,0,0,0,0.292255857911312,0,0,2.12910127812403,0.890328018336276,1.46598263418218,5.93892442701128,0,0,0,0,1.18120757152309,1.84461088766356,0.516856586336442,0.363533729477506,0.712994756769443,3.16036757935816,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0.643011105094777,0,0.535106452806212,0.329098041204242,1.2178597964584,0,0.42366414172764,3.30792597082443,3.62749756471256,1.45317984026315,1.02531972377865,0.954978752025092,0.984845398470368,0.582961673259701,0.370850604021019,0.170870880797853,0.82554747185289,0.370389054739423,0.376736914009382,0.27338845544205,0,0,0,0,2.86401185404534,0,3.25311147402958,4.75223499615926,5.43629569637619,5.45906409365444,9.44050424693745,8.26534557253359,6.80565449158477,6.09190374471426,1.24267862617385,0,0,0.165458490457098,0.583353565032143,0.129159823477731,0.337912250981556,0.352071715937262,1.43224823328345,0.524296722128554,0.241584120826006,6.62469014393091,0,0,0.308132871494482,0,0.179026695667481,0,0.120195449519969,0,0.403865799792591,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,3.62768613784338,0,0,0,17.9666322449937,4.31669693537719,4.39563898241436,2.35805216986972,6.01886524842436,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,1.02440163452481,2.43106717068294,2.93458427679175,4.04455718590031,4.4449345560323,4.12070114477788,3.85103051510178,4.04315538822076,2.78827229879264,4.33840585187975,3.55837728385553,3.71345883948242,4.7671439233159,6.19181798667996,3.47652977834566,3.8581844092741,2.88460130562315,3.38557516309114,2.05721551431249,3.01708870470874,4.05341522910446,5.0871245821315,5.27012530325851,3.29996970777538,3.84148743032822,4.20911538300549,5.43216455383447,2.80571135828869,4.03359061622192,4.23569274214923,2.86461730218783,2.94379998253335,4.05103883060397,2.74791635731741,5.84829021113521,2.79332370262788,5.54736162999646,8.6030653456611,11.1296561097802|short_description=p2@Jph2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=59091 | |||
|HGNC= | |||
|MCL_coexpression_id=35 | |||
|TSSclassifier=NA | |||
|UniProt=Q9ET78 | |||
|association_with_transcript=4bp_to_ENSMUST00000017961_5end | |||
|cluster_id=chr2:163223649..163223680,- | |||
|description=CAGE_peak_2_at_Jph2_5end | |||
|id=chr2:163223649..163223680,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.23e-14!23;UBERON:0001009!3.23e-14!23;UBERON:0007100!2.35e-13!18;UBERON:0000948!2.35e-13!18;UBERON:0005498!2.35e-13!18;UBERON:0004140!2.35e-13!18;UBERON:0009881!2.35e-13!18;UBERON:0004141!2.35e-13!18;UBERON:0003084!2.35e-13!18;UBERON:0007005!2.35e-13!18;UBERON:0004139!2.35e-13!18;UBERON:0004291!2.35e-13!18;UBERON:0004872!9.61e-11!33;UBERON:0003103!1.16e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.55e-16,23;UBERON:0001009,4.55e-16,23;UBERON:0007100,5.98e-16,18;UBERON:0000948,5.98e-16,18;UBERON:0005498,5.98e-16,18;UBERON:0004140,5.98e-16,18;UBERON:0009881,5.98e-16,18;UBERON:0004141,5.98e-16,18;UBERON:0003084,5.98e-16,18;UBERON:0007005,5.98e-16,18;UBERON:0004139,5.98e-16,18;UBERON:0004291,5.98e-16,18;UBERON:0004872,2.07e-09,33;UBERON:0003103,3.32e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27331726736501,1.72340783073175,3.85448179539531,0,0,0.439372365468944,0.58328969722285,0,0,0,0,0,8.7468208252222,8.88253663810146,3.09403255366465,0,0,0,0.677689064138264,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,11.5164424508037,0.170430322578058,0,0,0,1.28326477414318,0,0,0.216491041011214,0,0,2.16949371466214,0,0.593768556259299,0.346970653532272,0.608930956624282,0.691846491768175,0.753613202763113,0.823120949949934,1.0053327306374,2.22475470960936,6.50697106139602,7.07688441559899,9.54424414689714,14.575540218386,10.6672555689749,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0.162241263067758,0.81471491080253,5.72272064806428,0,1.05220927943237,0.520481771850815,0.229902104433473,0.540186389416048,1.20563854268572,0.816437989815934,0.640568601424249,1.49922759295566,1.29351685369508,0,0.567318240503458,1.23165786914764,1.97276159184817,0.834141747676794,0.696504333044333,1.02891068203972,0.199034266818493,0,0,0,19.0555710732662,14.7751417788091,19.0865785148676,14.9149183418682,16.9217239302767,18.8205877722601,20.6955210827863,26.0225199357631,21.6015883379264,27.8106146353782,31.027650710949,39.3994414392859,50.7313956365903,48.7401255946132,34.6252560401759,0,0.205809224758569,0,0.528901133327089,1.2797295032114,2.78684006232526,3.73715637834071,2.21851877085677,2.00140239460383,2.66315876557583,3.79623249235609,2.30578536613615,3.77002813200404,3.97912944082302,2.9244613067868,6.29173586057955,3.02593269824572,1.59313018603494,0.189667900953082,1.25673363870702,1.1270773567308,1.4255592949172,0.581857461502877,1.05203729835478,1.07502113111237,0.590440591918409,0,0.493588655687202,0,1.33476084572875,0,0,0,0,0,0.575392274901621,0,0,0,0.744281895337007,0.312037673114561,0.252578877947112,0.538192240565737,0,1.84753190166605,3.60033682363921,3.42226450528254,2.03694102930226,1.40814148973101,3.35012514883632,1.6663054862021,3.90267295715598,2.67979744980525,4.20782910332672,5.74037167166954,3.27726629431476,3.7990696010497,1.3018415272336,0,0,0.983528546038072,1.93155722413313,0,0,0,61.0979643834583,0,0,0,0,0,0,0,0.292255857911312,0,0,2.12910127812403,0.890328018336276,1.46598263418218,5.93892442701128,0,0,0,0,1.18120757152309,1.84461088766356,0.516856586336442,0.363533729477506,0.712994756769443,3.16036757935816,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0.643011105094777,0,0.535106452806212,0.329098041204242,1.2178597964584,0,0.42366414172764,3.30792597082443,3.62749756471256,1.45317984026315,1.02531972377865,0.954978752025092,0.984845398470368,0.582961673259701,0.370850604021019,0.170870880797853,0.82554747185289,0.370389054739423,0.376736914009382,0.27338845544205,0,0,0,0,2.86401185404534,0,3.25311147402958,4.75223499615926,5.43629569637619,5.45906409365444,9.44050424693745,8.26534557253359,6.80565449158477,6.09190374471426,1.24267862617385,0,0,0.165458490457098,0.583353565032143,0.129159823477731,0.337912250981556,0.352071715937262,1.43224823328345,0.524296722128554,0.241584120826006,6.62469014393091,0,0,0.308132871494482,0,0.179026695667481,0,0.120195449519969,0,0.403865799792591,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,3.62768613784338,0,0,0,17.9666322449937,4.31669693537719,4.39563898241436,2.35805216986972,6.01886524842436,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,1.02440163452481,2.43106717068294,2.93458427679175,4.04455718590031,4.4449345560323,4.12070114477788,3.85103051510178,4.04315538822076,2.78827229879264,4.33840585187975,3.55837728385553,3.71345883948242,4.7671439233159,6.19181798667996,3.47652977834566,3.8581844092741,2.88460130562315,3.38557516309114,2.05721551431249,3.01708870470874,4.05341522910446,5.0871245821315,5.27012530325851,3.29996970777538,3.84148743032822,4.20911538300549,5.43216455383447,2.80571135828869,4.03359061622192,4.23569274214923,2.86461730218783,2.94379998253335,4.05103883060397,2.74791635731741,5.84829021113521,2.79332370262788,5.54736162999646,8.6030653456611,11.1296561097802 | |||
|short_description=p2@Jph2 | |||
}} |
Latest revision as of 01:59, 26 September 2015
Short description: | p2@Jph2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Jph2_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | 4bp_to_ENSMUST00000017961_5end |
EntrezGene: | Jph2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 4.55e-16 | 23 |
circulatory system | 4.55e-16 | 23 |
primary circulatory organ | 5.98e-16 | 18 |
heart | 5.98e-16 | 18 |
primitive heart tube | 5.98e-16 | 18 |
primary heart field | 5.98e-16 | 18 |
anterior lateral plate mesoderm | 5.98e-16 | 18 |
heart tube | 5.98e-16 | 18 |
heart primordium | 5.98e-16 | 18 |
cardiac mesoderm | 5.98e-16 | 18 |
cardiogenic plate | 5.98e-16 | 18 |
heart rudiment | 5.98e-16 | 18 |
splanchnic layer of lateral plate mesoderm | 2.07e-09 | 33 |
compound organ | 3.32e-07 | 43 |