FFCP PHASE1:Mm9::chr2:162486811..162486826,-: Difference between revisions
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{{FFCP|EntrezGene=19281|HGNC=|MCL_coexpression_id=1|UniProt=B1AQN2|association_with_transcript=3bp_to_ENSMUST00000109442_5end|description=CAGE_peak_1_at_Ptprt_5end|id=chr2:162486811..162486826,-|ontology_enrichment_celltype=CL:0000540!1.04e-12!33;CL:0000047!1.04e-12!33;CL:0000031!1.04e-12!33;CL:0000404!1.04e-12!33;CL:0000117!1.35e-12!23;CL:0000337!1.35e-12!23;CL:0000221!6.54e-12!44;CL:0000133!6.54e-12!44;CL:0002319!1.85e-11!43;CL:0000393!3.79e-08!39;CL:0000211!3.79e-08!39;CL:0000055!6.30e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.97e-14,23;CL:0000337,4.97e-14,23;CL:0000540,1.13e-13,33;CL:0000047,1.13e-13,33;CL:0000031,1.13e-13,33;CL:0000404,1.13e-13,33;CL:0000221,1.69e-12,44;CL:0000133,1.69e-12,44;CL:0002319,5.35e-12,43;CL:0000393,2.02e-09,39;CL:0000211,2.02e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.50e-29!73;UBERON:0005743!2.50e-29!73;UBERON:0000073!7.78e-29!75;UBERON:0001016!7.78e-29!75;UBERON:0000033!5.85e-27!63;UBERON:0004121!8.73e-26!102;UBERON:0000924!8.73e-26!102;UBERON:0006601!8.73e-26!102;UBERON:0001049!1.78e-25!52;UBERON:0005068!1.78e-25!52;UBERON:0006241!1.78e-25!52;UBERON:0007135!1.78e-25!52;UBERON:0002346!1.73e-24!71;UBERON:0003075!1.73e-24!71;UBERON:0007284!1.73e-24!71;UBERON:0000955!7.98e-24!50;UBERON:0006238!7.98e-24!50;UBERON:0002616!4.75e-23!49;UBERON:0003056!1.02e-20!49;UBERON:0002020!4.65e-19!34;UBERON:0003080!6.07e-19!40;UBERON:0002780!2.77e-18!39;UBERON:0001890!2.77e-18!39;UBERON:0006240!2.77e-18!39;UBERON:0002791!1.07e-15!29;UBERON:0003528!1.07e-15!29;UBERON:0001893!1.07e-15!29;UBERON:0000153!4.73e-14!94;UBERON:0007811!1.47e-13!86;UBERON:0000956!1.85e-11!21;UBERON:0001869!1.85e-11!21;UBERON:0000203!1.85e-11!21;UBERON:0002619!6.22e-10!17;UBERON:0004111!3.97e-09!122;UBERON:0000025!1.02e-08!114;UBERON:0002021!5.59e-08!10;UBERON:0000411!5.59e-08!10;UBERON:0001950!5.59e-08!10;UBERON:0000468!2.50e-07!333;UBERON:0003076!4.38e-07!12;UBERON:0003057!4.38e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.76e-32,73;UBERON:0001016,2.09e-31,75;UBERON:0002346,8.28e-31,64;UBERON:0003075,8.28e-31,64;UBERON:0007284,8.28e-31,64;UBERON:0000073,6.57e-30,54;UBERON:0004121,1.12e-29,95;UBERON:0000924,1.12e-29,95;UBERON:0006601,1.12e-29,95;UBERON:0001049,1.35e-28,52;UBERON:0005068,1.35e-28,52;UBERON:0006241,1.35e-28,52;UBERON:0007135,1.35e-28,52;UBERON:0010371,2.60e-26,73;UBERON:0000955,8.58e-25,47;UBERON:0006238,8.58e-25,47;UBERON:0002616,6.24e-24,46;UBERON:0003056,3.27e-23,49;UBERON:0002020,2.46e-21,34;UBERON:0003080,3.32e-21,40;UBERON:0002780,1.85e-20,39;UBERON:0001890,1.85e-20,39;UBERON:0006240,1.85e-20,39;UBERON:0003528,1.56e-17,29;UBERON:0002791,1.56e-17,29;UBERON:0001893,1.56e-17,29;UBERON:0010314,5.14e-17,92;UBERON:0000956,9.61e-13,21;UBERON:0001869,9.61e-13,21;UBERON:0000203,9.61e-13,21;UBERON:0002619,5.08e-11,17;UBERON:0004111,7.22e-09,122;UBERON:0002021,8.16e-09,10;UBERON:0000411,8.16e-09,10;UBERON:0001950,8.16e-09,10;UBERON:0000025,3.58e-08,114;UBERON:0003076,8.33e-08,12;UBERON:0003057,8.33e-08,12|phase1_expression=5.60520964866779,0.697950815278722,0.454999239389536,0,0,1.51091344720701,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29320347117916,0,0,0,0,0,0.86152399231815,1.07735616342945,0,0,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,2.18025156380447,2.41654801007919,4.47188767870852,0.419959264876088,0,0,0,0,0,0,0.515672092277442,24.0756588422921,31.2104677770499,23.4517619297286,1.69422266034566,1.77858959222228,0,0,0,3.89480143673926,4.2264013585371,6.947204024668,7.83034442323806,4.20649922702764,30.8503063156108,31.3633328151291,6.98197555525238,5.84657373211242,9.19218786610021,19.82085857989,20.0469120793745,20.2760623898241,21.4974649000216,20.6762074541446,12.5019208933622,17.0301629390842,25.3243174514256,17.5717984943332,54.5062883126285,45.9860528981103,33.3655008027288,1.21161909333094,0.831287161174641,0.289864488701678,3.44169550792555,0,0,0,0.448026887097336,1.12355536105401,0,0,0,12.2533775205712,0,0,0,0,0,0,1.02765491747154,0.258937883647172,0,1.04091196059682,0.913396434936424,0.922461989024234,2.41156224884196,1.76383060703557,0,0.247194967734374,0,0,0,0.441683036920787,0,0,34.5481340473626,40.0043210013699,0.510914110417183,0,0,0,33.7028938660851,27.9075367719362,21.4868942112998,45.5419718903764,37.3344567702283,19.3242881440391,30.6635987198062,0.305518091550949,1.24406970610093,1.26361379216837,1.47309299120532,3.77349284591841,1.37941262660084,1.80062129805349,3.31550599238573,10.2054748726992,8.07116437794554,9.27647073141315,8.2785078636485,1.07783996466421,4.34943984385984,4.57472922826267,2.84954452155847,3.89266148915837,1.74126083261083,1.02891068203972,0.398068533636986,0,0,0,1.24275463521301,0.469052119962192,0.540186184383045,0.946978942340841,0.590292695242212,0.154267112887378,0,0.536546802799238,0.583826711835847,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,22.5010244963616,13.1717903845484,0.330418782983798,0,0.6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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19281 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=B1AQN2 | |||
|association_with_transcript=3bp_to_ENSMUST00000109442_5end | |||
|cluster_id=chr2:162486811..162486826,- | |||
|description=CAGE_peak_1_at_Ptprt_5end | |||
|id=chr2:162486811..162486826,- | |||
|ontology_enrichment_celltype=CL:0000540!1.04e-12!33;CL:0000047!1.04e-12!33;CL:0000031!1.04e-12!33;CL:0000404!1.04e-12!33;CL:0000117!1.35e-12!23;CL:0000337!1.35e-12!23;CL:0000221!6.54e-12!44;CL:0000133!6.54e-12!44;CL:0002319!1.85e-11!43;CL:0000393!3.79e-08!39;CL:0000211!3.79e-08!39;CL:0000055!6.30e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.97e-14,23;CL:0000337,4.97e-14,23;CL:0000540,1.13e-13,33;CL:0000047,1.13e-13,33;CL:0000031,1.13e-13,33;CL:0000404,1.13e-13,33;CL:0000221,1.69e-12,44;CL:0000133,1.69e-12,44;CL:0002319,5.35e-12,43;CL:0000393,2.02e-09,39;CL:0000211,2.02e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.50e-29!73;UBERON:0005743!2.50e-29!73;UBERON:0000073!7.78e-29!75;UBERON:0001016!7.78e-29!75;UBERON:0000033!5.85e-27!63;UBERON:0004121!8.73e-26!102;UBERON:0000924!8.73e-26!102;UBERON:0006601!8.73e-26!102;UBERON:0001049!1.78e-25!52;UBERON:0005068!1.78e-25!52;UBERON:0006241!1.78e-25!52;UBERON:0007135!1.78e-25!52;UBERON:0002346!1.73e-24!71;UBERON:0003075!1.73e-24!71;UBERON:0007284!1.73e-24!71;UBERON:0000955!7.98e-24!50;UBERON:0006238!7.98e-24!50;UBERON:0002616!4.75e-23!49;UBERON:0003056!1.02e-20!49;UBERON:0002020!4.65e-19!34;UBERON:0003080!6.07e-19!40;UBERON:0002780!2.77e-18!39;UBERON:0001890!2.77e-18!39;UBERON:0006240!2.77e-18!39;UBERON:0002791!1.07e-15!29;UBERON:0003528!1.07e-15!29;UBERON:0001893!1.07e-15!29;UBERON:0000153!4.73e-14!94;UBERON:0007811!1.47e-13!86;UBERON:0000956!1.85e-11!21;UBERON:0001869!1.85e-11!21;UBERON:0000203!1.85e-11!21;UBERON:0002619!6.22e-10!17;UBERON:0004111!3.97e-09!122;UBERON:0000025!1.02e-08!114;UBERON:0002021!5.59e-08!10;UBERON:0000411!5.59e-08!10;UBERON:0001950!5.59e-08!10;UBERON:0000468!2.50e-07!333;UBERON:0003076!4.38e-07!12;UBERON:0003057!4.38e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.76e-32,73;UBERON:0001016,2.09e-31,75;UBERON:0002346,8.28e-31,64;UBERON:0003075,8.28e-31,64;UBERON:0007284,8.28e-31,64;UBERON:0000073,6.57e-30,54;UBERON:0004121,1.12e-29,95;UBERON:0000924,1.12e-29,95;UBERON:0006601,1.12e-29,95;UBERON:0001049,1.35e-28,52;UBERON:0005068,1.35e-28,52;UBERON:0006241,1.35e-28,52;UBERON:0007135,1.35e-28,52;UBERON:0010371,2.60e-26,73;UBERON:0000955,8.58e-25,47;UBERON:0006238,8.58e-25,47;UBERON:0002616,6.24e-24,46;UBERON:0003056,3.27e-23,49;UBERON:0002020,2.46e-21,34;UBERON:0003080,3.32e-21,40;UBERON:0002780,1.85e-20,39;UBERON:0001890,1.85e-20,39;UBERON:0006240,1.85e-20,39;UBERON:0003528,1.56e-17,29;UBERON:0002791,1.56e-17,29;UBERON:0001893,1.56e-17,29;UBERON:0010314,5.14e-17,92;UBERON:0000956,9.61e-13,21;UBERON:0001869,9.61e-13,21;UBERON:0000203,9.61e-13,21;UBERON:0002619,5.08e-11,17;UBERON:0004111,7.22e-09,122;UBERON:0002021,8.16e-09,10;UBERON:0000411,8.16e-09,10;UBERON:0001950,8.16e-09,10;UBERON:0000025,3.58e-08,114;UBERON:0003076,8.33e-08,12;UBERON:0003057,8.33e-08,12 | |||
|phase1_expression=5.60520964866779,0.697950815278722,0.454999239389536,0,0,1.51091344720701,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29320347117916,0,0,0,0,0,0.86152399231815,1.07735616342945,0,0,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,2.18025156380447,2.41654801007919,4.47188767870852,0.419959264876088,0,0,0,0,0,0,0.515672092277442,24.0756588422921,31.2104677770499,23.4517619297286,1.69422266034566,1.77858959222228,0,0,0,3.89480143673926,4.2264013585371,6.947204024668,7.83034442323806,4.20649922702764,30.8503063156108,31.3633328151291,6.98197555525238,5.84657373211242,9.19218786610021,19.82085857989,20.0469120793745,20.2760623898241,21.4974649000216,20.6762074541446,12.5019208933622,17.0301629390842,25.3243174514256,17.5717984943332,54.5062883126285,45.9860528981103,33.3655008027288,1.21161909333094,0.831287161174641,0.289864488701678,3.44169550792555,0,0,0,0.448026887097336,1.12355536105401,0,0,0,12.2533775205712,0,0,0,0,0,0,1.02765491747154,0.258937883647172,0,1.04091196059682,0.913396434936424,0.922461989024234,2.41156224884196,1.76383060703557,0,0.247194967734374,0,0,0,0.441683036920787,0,0,34.5481340473626,40.0043210013699,0.510914110417183,0,0,0,33.7028938660851,27.9075367719362,21.4868942112998,45.5419718903764,37.3344567702283,19.3242881440391,30.6635987198062,0.305518091550949,1.24406970610093,1.26361379216837,1.47309299120532,3.77349284591841,1.37941262660084,1.80062129805349,3.31550599238573,10.2054748726992,8.07116437794554,9.27647073141315,8.2785078636485,1.07783996466421,4.34943984385984,4.57472922826267,2.84954452155847,3.89266148915837,1.74126083261083,1.02891068203972,0.398068533636986,0,0,0,1.24275463521301,0.469052119962192,0.540186184383045,0.946978942340841,0.590292695242212,0.154267112887378,0,0.536546802799238,0.583826711835847,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,22.5010244963616,13.1717903845484,0.330418782983798,0,0.639864751605702,1.16118335930219,0.902072229254653,0.80673409849337,0.889512175379481,0.380451252225118,0.474529061544512,0.329397909448022,1.00534083520108,0.994782360205754,0.779856348476481,0,0.648414149624083,0,2.84501851429623,3.77020091612105,4.50830942692322,2.8511185898344,2.13347735884388,2.73529697572242,0.189709611372772,0,0.156998727841375,0,0.592905254174298,0,0.196558995113203,0,0.202860121388503,0.241177159752417,1.2731292589071,0.863088412352432,0.972811360650212,1.92192989231657,4.31304619582064,2.60498663367952,2.49630138491648,1.76805214562978,0.538192240565737,0.964887042726734,0.554259570499814,3.22135400009824,1.30371981153621,2.03694102930226,1.64283173801951,1.17254380209271,0.476087281772027,1.56106918286239,1.26108115284953,2.6575762757853,5.58091690301205,1.96635977658886,0.863424909329478,1.15719246865209,0,0,0,1.10374698521893,21.6743296483519,26.4898411698379,0,0.252470927204373,1.26203287766503,2.73307121007647,2.80050417052639,2.15071918157297,2.00518806674155,0.849229592366497,1.21443210502468,7.89090816360542,6.32460444714438,51.7327319439109,1.13552068166615,0.35613120733451,0.488660878060728,2.3095817216155,0,0.728341908464944,0.604647113929502,0.565815239267694,0.885905678642318,1.84461088766356,2.06742634534577,4.36240475373007,0.712994756769443,1.8962205476149,0,1.03135543248187,1.02131881726136,3.96134406868882,4.01011919726539,4.07240366560025,5.49754724291048,6.95638388648075,6.91105886528908,7.30715877875038,0.23467170806371,0,2.8668691747145,0,0.484393280087717,0.361877549568935,0.596861720015682,0.492422699235184,0.291480836629851,20.3967832211561,0,1.857481811669,0.740778109478847,0.565105371014073,0,0,0,0,0,0,0.632671987162271,0.813277868507395,1.08005340821801,0.627264888043406,0.655087691238533,0.674321731924103,2.56225712748541,1.83229159388821,0.388844919875379,3.10669656543463,0.56369293868419,0.448549638131936,0.165458490457098,0,0.258319646955462,0.506868376472335,0.234714477291508,1.0416350787516,1.46803082195995,1.20792060413003,0,0,0.608175645870493,0.924398614483445,1.42912905275575,0.716106782669926,0.993406773906324,1.08175904567972,0.443068581523732,0,0.304827226619999,0.100826185136841,0.194915761479505,0.0962118416403295,0.467507608726276,3.62768613784338,0.443971906748129,0.538283139656854,0.671538465456314,1.9318959403219,0,0,0,0,37.2736216127264,42.8102469951675,42.3942679945154,51.5559547031063,39.0497036269266,48.3452094329408,48.60162001669,33.7740902418165,33.0793958558469,33.1366599521165,0.726511433089237,3.19219898720825,4.95127456686989,5.34834777550247,2.72497111416377,4.96377472815038,6.22290837844523,3.91466608753899,4.1719497246936,6.31743029409494,5.32306529769503,8.48818536237343,5.3375659257833,7.10679191694049,7.00712721258482,6.19181798667996,7.18482820858104,7.5234595980845,3.29668720642645,4.85756436443511,5.82877729055206,5.50174999093946,5.00715998889374,6.54058874845478,7.71696919405711,6.34609559187574,6.21955107767427,5.26139422875686,6.11118512306378,5.05028044491965,8.66035632306471,7.38783617816726,6.956927733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| |||
|short_description=p1@Ptprt | |||
}} |
Latest revision as of 01:38, 26 September 2015
Short description: | p1@Ptprt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ptprt_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 3bp_to_ENSMUST00000109442_5end |
EntrezGene: | Ptprt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.97e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.97e-14 | 23 |
neuron | 1.13e-13 | 33 |
neuronal stem cell | 1.13e-13 | 33 |
neuroblast | 1.13e-13 | 33 |
electrically signaling cell | 1.13e-13 | 33 |
ectodermal cell | 1.69e-12 | 44 |
neurectodermal cell | 1.69e-12 | 44 |
neural cell | 5.35e-12 | 43 |
electrically responsive cell | 2.02e-09 | 39 |
electrically active cell | 2.02e-09 | 39 |