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FFCP PHASE1:Mm9::chr2:158235643..158235654,+: Difference between revisions

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{{FFCP|EntrezGene=228850|HGNC=|UniProt=|association_with_transcript=25bp_to_ENSMUST00000173137_5end|description=CAGE_peak_3_at_Ralgapb_5end|id=chr2:158235643..158235654,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.57e-15!102;UBERON:0000924!2.57e-15!102;UBERON:0006601!2.57e-15!102;UBERON:0000033!2.31e-14!63;UBERON:0002346!6.02e-14!71;UBERON:0003075!6.02e-14!71;UBERON:0007284!6.02e-14!71;UBERON:0000073!2.24e-13!75;UBERON:0001016!2.24e-13!75;UBERON:0001049!6.89e-13!52;UBERON:0005068!6.89e-13!52;UBERON:0006241!6.89e-13!52;UBERON:0007135!6.89e-13!52;UBERON:0001017!9.67e-13!73;UBERON:0005743!9.67e-13!73;UBERON:0000955!8.58e-12!50;UBERON:0006238!8.58e-12!50;UBERON:0002616!3.20e-11!49;UBERON:0003056!2.13e-10!49;UBERON:0002020!1.25e-09!34;UBERON:0003080!7.48e-09!40;UBERON:0002780!2.50e-08!39;UBERON:0001890!2.50e-08!39;UBERON:0006240!2.50e-08!39;UBERON:0002791!6.57e-08!29;UBERON:0003528!6.57e-08!29;UBERON:0001893!6.57e-08!29;UBERON:0002021!3.19e-07!10;UBERON:0000411!3.19e-07!10;UBERON:0001950!3.19e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.13e-15,95;UBERON:0000924,2.13e-15,95;UBERON:0006601,2.13e-15,95;UBERON:0002346,4.52e-14,64;UBERON:0003075,4.52e-14,64;UBERON:0007284,4.52e-14,64;UBERON:0001016,8.24e-14,75;UBERON:0000073,3.48e-13,54;UBERON:0001017,3.84e-13,73;UBERON:0001049,4.96e-13,52;UBERON:0005068,4.96e-13,52;UBERON:0006241,4.96e-13,52;UBERON:0007135,4.96e-13,52;UBERON:0010371,8.23e-13,73;UBERON:0010314,1.26e-11,92;UBERON:0000955,3.83e-11,47;UBERON:0006238,3.83e-11,47;UBERON:0002616,1.48e-10,46;UBERON:0003056,2.10e-10,49;UBERON:0002020,7.62e-10,34;UBERON:0003080,5.31e-09,40;UBERON:0002780,1.88e-08,39;UBERON:0001890,1.88e-08,39;UBERON:0006240,1.88e-08,39;UBERON:0003528,4.93e-08,29;UBERON:0002791,4.93e-08,29;UBERON:0001893,4.93e-08,29;UBERON:0002021,1.46e-07,10;UBERON:0000411,1.46e-07,10;UBERON:0001950,1.46e-07,10|phase1_expression=1.60148847104794,1.39590163055744,1.36499771816861,0.30246421130683,1.50268718983904,1.00727563147134,0.934450562382103,0.516493293766305,0.703943610758334,0.70219357896598,0.513653904676515,0.558405112967355,1.02720437958723,0.437102012094987,0,0.809901069559304,0.699561878128147,0.473193248037357,0.959801035240171,0.84877930359606,1.87095238332354,0.595745707205312,1.04479915655574,0.95995453676044,0.68822784320151,2.29692785646008,0.430761996159075,1.29282739611533,1.52018735565099,1.26015064879965,1.10865255327652,1.27006134691926,0,0,0.288851619751275,1.16364251750945,0.816677425049476,0.837063261473815,0,2.09409497589519,2.94115744015507,0,1.94204141212461,0.755380907853464,1.01376931219515,2.20256102594018,1.56478268869608,0.872100625521786,0.439372365468944,0.777719596297134,1.39986421625363,0,1.17447824240415,0.725362142011344,0.672187598284928,0.771778308107841,0.286533439938757,0.515672092277442,1.21389876515759,4.23192783417626,1.90149421051854,0,1.77858959222228,0.449949858640699,0,0,0,1.15265491596466,1.55534418462716,2.02508907497536,1.26194976810829,1.99955689082663,2.20868540951614,1.22490799214954,1.0543001812006,0.919218786610021,1.10115880999389,2.29837208553338,4.91540906419979,3.03338461779446,3.01909223887952,1.56274011167028,1.95428099300967,1.68828783009504,2.44477196442896,2.94628585473668,1.85083185038834,2.60959224155421,2.27178579999552,1.88928900266964,1.73918693221007,0,0,1.07940638327563,0.649776417447669,0,0.561777680527007,1.70430322578058,0.519572009205738,1.7666978725517,1.12674735821344,0,0,0,1.08245520505607,1.01343946190039,0.505524445014783,1.02765491747154,0.258937883647172,2.22663208597237,0.867426633830679,0.913396434936424,0.922461989024234,1.05505848386836,2.4693628498498,2.01066546127481,1.23597483867187,1.15679485535929,0.884610551949874,1.7794353494215,1.32504911076236,1.45462575940567,1.86391761218122,2.92780797011547,3.56059401582874,1.53274233125155,0.599075622529601,0,0.508280908292259,3.89455662452539,2.74500361691176,1.7591609295801,4.86708096538374,6.64860189058859,3.1168206683934,2.92034273521964,0.81471491080253,1.24406970610093,1.26361379216837,2.31486041475121,1.17108398666433,0.919608417733892,1.44049703844279,1.65775299619287,2.31324097114515,2.3060469651273,2.34254311399322,3.62184719034622,1.29340795759705,2.26927296201383,1.05570674498369,1.09597866213787,0.278047249225598,2.43776516565517,1.23469281844766,1.79130840136644,0,0.257347907114715,0.568326998791185,1.86413195281952,0.234526059981096,1.80062061461015,0.946978942340841,1.57411385397923,1.07986979021165,0.697601834251224,1.60964040839772,1.28441876603886,1.48103864922132,1.80584210487005,1.78351381000883,1.46199987425332,1.3173006917463,1.61047702512446,2.52347938276953,3.08713837137853,1.98251269790279,0.528901133327089,2.13288250535234,0.928946687441754,0.902072229254653,1.00841762311671,0.667134131534611,0,1.89811624617805,0.658795818896044,0.754005626400808,0.596869416123452,0.779856348476481,0.898819408654221,1.080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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=228850
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=25bp_to_ENSMUST00000173137_5end
|cluster_id=chr2:158235643..158235654,+
|description=CAGE_peak_3_at_Ralgapb_5end
|id=chr2:158235643..158235654,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.57e-15!102;UBERON:0000924!2.57e-15!102;UBERON:0006601!2.57e-15!102;UBERON:0000033!2.31e-14!63;UBERON:0002346!6.02e-14!71;UBERON:0003075!6.02e-14!71;UBERON:0007284!6.02e-14!71;UBERON:0000073!2.24e-13!75;UBERON:0001016!2.24e-13!75;UBERON:0001049!6.89e-13!52;UBERON:0005068!6.89e-13!52;UBERON:0006241!6.89e-13!52;UBERON:0007135!6.89e-13!52;UBERON:0001017!9.67e-13!73;UBERON:0005743!9.67e-13!73;UBERON:0000955!8.58e-12!50;UBERON:0006238!8.58e-12!50;UBERON:0002616!3.20e-11!49;UBERON:0003056!2.13e-10!49;UBERON:0002020!1.25e-09!34;UBERON:0003080!7.48e-09!40;UBERON:0002780!2.50e-08!39;UBERON:0001890!2.50e-08!39;UBERON:0006240!2.50e-08!39;UBERON:0002791!6.57e-08!29;UBERON:0003528!6.57e-08!29;UBERON:0001893!6.57e-08!29;UBERON:0002021!3.19e-07!10;UBERON:0000411!3.19e-07!10;UBERON:0001950!3.19e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.13e-15,95;UBERON:0000924,2.13e-15,95;UBERON:0006601,2.13e-15,95;UBERON:0002346,4.52e-14,64;UBERON:0003075,4.52e-14,64;UBERON:0007284,4.52e-14,64;UBERON:0001016,8.24e-14,75;UBERON:0000073,3.48e-13,54;UBERON:0001017,3.84e-13,73;UBERON:0001049,4.96e-13,52;UBERON:0005068,4.96e-13,52;UBERON:0006241,4.96e-13,52;UBERON:0007135,4.96e-13,52;UBERON:0010371,8.23e-13,73;UBERON:0010314,1.26e-11,92;UBERON:0000955,3.83e-11,47;UBERON:0006238,3.83e-11,47;UBERON:0002616,1.48e-10,46;UBERON:0003056,2.10e-10,49;UBERON:0002020,7.62e-10,34;UBERON:0003080,5.31e-09,40;UBERON:0002780,1.88e-08,39;UBERON:0001890,1.88e-08,39;UBERON:0006240,1.88e-08,39;UBERON:0003528,4.93e-08,29;UBERON:0002791,4.93e-08,29;UBERON:0001893,4.93e-08,29;UBERON:0002021,1.46e-07,10;UBERON:0000411,1.46e-07,10;UBERON:0001950,1.46e-07,10
|phase1_expression=1.60148847104794,1.39590163055744,1.36499771816861,0.30246421130683,1.50268718983904,1.00727563147134,0.934450562382103,0.516493293766305,0.703943610758334,0.70219357896598,0.513653904676515,0.558405112967355,1.02720437958723,0.437102012094987,0,0.809901069559304,0.699561878128147,0.473193248037357,0.959801035240171,0.84877930359606,1.87095238332354,0.595745707205312,1.04479915655574,0.95995453676044,0.68822784320151,2.29692785646008,0.430761996159075,1.29282739611533,1.52018735565099,1.26015064879965,1.10865255327652,1.27006134691926,0,0,0.288851619751275,1.16364251750945,0.816677425049476,0.837063261473815,0,2.09409497589519,2.94115744015507,0,1.94204141212461,0.755380907853464,1.01376931219515,2.20256102594018,1.56478268869608,0.872100625521786,0.439372365468944,0.777719596297134,1.39986421625363,0,1.17447824240415,0.725362142011344,0.672187598284928,0.771778308107841,0.286533439938757,0.515672092277442,1.21389876515759,4.23192783417626,1.90149421051854,0,1.77858959222228,0.449949858640699,0,0,0,1.15265491596466,1.55534418462716,2.02508907497536,1.26194976810829,1.99955689082663,2.20868540951614,1.22490799214954,1.0543001812006,0.919218786610021,1.10115880999389,2.29837208553338,4.91540906419979,3.03338461779446,3.01909223887952,1.56274011167028,1.95428099300967,1.68828783009504,2.44477196442896,2.94628585473668,1.85083185038834,2.60959224155421,2.27178579999552,1.88928900266964,1.73918693221007,0,0,1.07940638327563,0.649776417447669,0,0.561777680527007,1.70430322578058,0.519572009205738,1.7666978725517,1.12674735821344,0,0,0,1.08245520505607,1.01343946190039,0.505524445014783,1.02765491747154,0.258937883647172,2.22663208597237,0.867426633830679,0.913396434936424,0.922461989024234,1.05505848386836,2.4693628498498,2.01066546127481,1.23597483867187,1.15679485535929,0.884610551949874,1.7794353494215,1.32504911076236,1.45462575940567,1.86391761218122,2.92780797011547,3.56059401582874,1.53274233125155,0.599075622529601,0,0.508280908292259,3.89455662452539,2.74500361691176,1.7591609295801,4.86708096538374,6.64860189058859,3.1168206683934,2.92034273521964,0.81471491080253,1.24406970610093,1.26361379216837,2.31486041475121,1.17108398666433,0.919608417733892,1.44049703844279,1.65775299619287,2.31324097114515,2.3060469651273,2.34254311399322,3.62184719034622,1.29340795759705,2.26927296201383,1.05570674498369,1.09597866213787,0.278047249225598,2.43776516565517,1.23469281844766,1.79130840136644,0,0.257347907114715,0.568326998791185,1.86413195281952,0.234526059981096,1.80062061461015,0.946978942340841,1.57411385397923,1.07986979021165,0.697601834251224,1.60964040839772,1.28441876603886,1.48103864922132,1.80584210487005,1.78351381000883,1.46199987425332,1.3173006917463,1.61047702512446,2.52347938276953,3.08713837137853,1.98251269790279,0.528901133327089,2.13288250535234,0.928946687441754,0.902072229254653,1.00841762311671,0.667134131534611,0,1.89811624617805,0.658795818896044,0.754005626400808,0.596869416123452,0.779856348476481,0.898819408654221,1.08069024937347,0.995706366271836,0.569003702859245,1.14248512609729,2.25415471346161,2.24016460629846,1.93952487167626,1.68325967736765,1.70738650235495,1.62371162777562,1.8839847340965,2.59134044235781,0.296452627087149,0.333690211432188,0.589676985339609,0.449724224769707,0.202860121388503,0.482354319504834,0.50925170356284,0.575392274901621,0.972811360650212,1.64736847912849,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,1.4351793081753,0.964887042726734,2.58654466233247,1.13694847062291,1.30371981153621,1.86719594352707,2.58159273117352,1.84256883185997,1.6663054862021,2.53673742215138,2.04925687338048,1.55025282754142,1.91345722388985,1.80249646187312,1.72684981865896,0.723245292907558,3.01582567878545,0,1.47529281905711,1.37968373152366,3.85321415970701,3.6335622843583,1.47541450839008,1.51482556322624,1.26203287766503,1.95219372148319,0.861693590931196,1.91175038362042,1.55959071857676,2.26461224631066,2.02405350837447,0.584511715822624,0.790575555893047,4.17717711348349,1.70328102249922,0.534196811001766,1.14020871547503,1.31976098378028,2.65490276679926,0.485561272309963,1.209294227859,0.565815239267694,0.590603785761546,0.614870295887855,2.06742634534577,2.18120237686503,1.06949213515416,2.21225730555071,1.05418608574999,1.03135543248187,1.70219802876894,2.88097750450096,1.16422815404479,1.28602221018955,2.30542303734956,0.891844088010353,1.64549020602121,0.304464949114599,1.17335854031855,1.69465656691056,2.42581237860458,1.15420377059036,1.45317984026315,0.603129249281559,0.954978752025092,1.80554989719567,1.1659233465194,4.07935664423121,0.683483523191411,1.23832120777933,0.740778109478847,0.941842285023455,0.683471138605126,0.686334519619568,0.339956859987711,0.279902904647316,0.690999869022119,1.90934123603023,1.26534397432454,1.21991680276109,0.86404272657441,1.46361807210128,0.87345025498471,0.809186078308924,1.23980183588004,2.6175594198403,1.55537967950151,3.10669656543463,1.69107881605257,0.747582730219894,1.15820943319968,2.52786544847262,1.80823752868824,0.844780627453891,1.5256441023948,3.1249052362548,3.25063967719704,3.62376181239009,3.16833006883652,0.316011120628178,0.608175645870493,0.924398614483445,0.649604114888975,1.43221356533985,1.19208812868759,0.480781798079875,0.443068581523732,0.706765149637033,0.685861259894999,0.504130925684203,0.779663045918019,0.577271049841977,0.818138315270983,3.40095575422817,0.221985953374065,0.986852422704233,1.17519231454855,0.772758376128762,0.750729901804728,1.64836461840539,1.50057865355346,1.50471631210609,5.0827665835536,3.68260189205742,2.86447756719698,3.60891682921744,2.05524755931193,5.2877572817279,2.70009000092722,4.95353323546643,4.07828168085784,7.24864436452548,1.45302286617847,2.79317411380722,1.53660245178721,1.21553358534147,1.04806581313991,1.10306105070008,2.00022055021454,0.824140228955577,0.64183841918363,1.01078884705519,1.2673964994512,0.943131706930381,1.77918864192777,0.89635213366817,1.03383844120104,1.90517476513229,0.811190281613988,1.92909220463705,1.64834360321323,1.61918812147837,1.37147700954166,0.532427418478012,0.238436189947321,0.290692833264657,0.470546902076653,1.26921911837515,0.73171189149109,1.05227884575137,0.679020569229309,1.68342681497322,1.42362021749009,1.57607171800902,0.409231043169689,1.23949472948773,2.12197272079256,0.999242311751784,1.87145286756327,1.28922632428979,1.53030665655075,0.882365676478062,1.39120701372253
|short_description=p3@Ralgapb
}}

Latest revision as of 01:14, 26 September 2015

Short description:p3@Ralgapb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ralgapb_5end
Coexpression cluster:NA
Association with transcript: 25bp_to_ENSMUST00000173137_5end
EntrezGene:Ralgapb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ralgapb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D92.27
Mouse Schwann, donor2.CNhs12573.11746-123F91.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G11.78
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H12.59
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.13e-1595
ectoderm2.13e-1595
presumptive ectoderm2.13e-1595
neurectoderm4.52e-1464
neural plate4.52e-1464
presumptive neural plate4.52e-1464
nervous system8.24e-1475
regional part of nervous system3.48e-1354
central nervous system3.84e-1373
neural tube4.96e-1352
neural rod4.96e-1352
future spinal cord4.96e-1352
neural keel4.96e-1352
ecto-epithelium8.23e-1373
structure with developmental contribution from neural crest1.26e-1192
brain3.83e-1147
future brain3.83e-1147
regional part of brain1.48e-1046
pre-chordal neural plate2.10e-1049
gray matter7.62e-1034
anterior neural tube5.31e-0940
regional part of forebrain1.88e-0839
forebrain1.88e-0839
future forebrain1.88e-0839
brain grey matter4.93e-0829
regional part of telencephalon4.93e-0829
telencephalon4.93e-0829
occipital lobe1.46e-0710
visual cortex1.46e-0710
neocortex1.46e-0710
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