FFCP PHASE1:Mm9::chr10:124826487..124826609,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:124826487..124826609,-
|short_description=p@chr10:124826487..124826609,-
|description=CAGE_peak_at_chr10:124826487..124826609,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1011 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:124826487..124826609,- | |||
|description=CAGE_peak_at_chr10:124826487..124826609,- | |||
|id=chr10:124826487..124826609,- | |||
|ontology_enrichment_celltype=CL:0000117!1.21e-09!23;CL:0000337!1.21e-09!23;CL:0000540!8.47e-07!33;CL:0000047!8.47e-07!33;CL:0000031!8.47e-07!33;CL:0000404!8.47e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.48e-10,23;CL:0000337,9.48e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.40e-18!52;UBERON:0005068!9.40e-18!52;UBERON:0006241!9.40e-18!52;UBERON:0007135!9.40e-18!52;UBERON:0000955!1.39e-16!50;UBERON:0006238!1.39e-16!50;UBERON:0001017!3.38e-16!73;UBERON:0005743!3.38e-16!73;UBERON:0002616!5.29e-16!49;UBERON:0000033!2.27e-15!63;UBERON:0002020!2.45e-15!34;UBERON:0000073!5.00e-15!75;UBERON:0001016!5.00e-15!75;UBERON:0003080!6.63e-14!40;UBERON:0002780!2.41e-13!39;UBERON:0001890!2.41e-13!39;UBERON:0006240!2.41e-13!39;UBERON:0003056!1.54e-12!49;UBERON:0002791!1.66e-12!29;UBERON:0003528!1.66e-12!29;UBERON:0001893!1.66e-12!29;UBERON:0002346!4.12e-12!71;UBERON:0003075!4.12e-12!71;UBERON:0007284!4.12e-12!71;UBERON:0004121!1.15e-11!102;UBERON:0000924!1.15e-11!102;UBERON:0006601!1.15e-11!102;UBERON:0000956!2.31e-09!21;UBERON:0001869!2.31e-09!21;UBERON:0000203!2.31e-09!21;UBERON:0002021!5.95e-08!10;UBERON:0000411!5.95e-08!10;UBERON:0001950!5.95e-08!10;UBERON:0002619!7.56e-08!17;UBERON:0000153!1.27e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.08e-19,54;UBERON:0001049,1.15e-17,52;UBERON:0005068,1.15e-17,52;UBERON:0006241,1.15e-17,52;UBERON:0007135,1.15e-17,52;UBERON:0001017,7.40e-16,73;UBERON:0002020,1.61e-15,34;UBERON:0000955,6.76e-15,47;UBERON:0006238,6.76e-15,47;UBERON:0002346,1.05e-14,64;UBERON:0003075,1.05e-14,64;UBERON:0007284,1.05e-14,64;UBERON:0001016,1.12e-14,75;UBERON:0002616,2.52e-14,46;UBERON:0010371,5.71e-14,73;UBERON:0003080,6.16e-14,40;UBERON:0004121,1.82e-13,95;UBERON:0000924,1.82e-13,95;UBERON:0006601,1.82e-13,95;UBERON:0002780,2.27e-13,39;UBERON:0001890,2.27e-13,39;UBERON:0006240,2.27e-13,39;UBERON:0003528,1.19e-12,29;UBERON:0002791,1.19e-12,29;UBERON:0001893,1.19e-12,29;UBERON:0003056,1.43e-12,49;UBERON:0010314,2.26e-10,92;UBERON:0000956,1.83e-09,21;UBERON:0001869,1.83e-09,21;UBERON:0000203,1.83e-09,21;UBERON:0002021,4.90e-08,10;UBERON:0000411,4.90e-08,10;UBERON:0001950,4.90e-08,10;UBERON:0002619,6.25e-08,17 | |||
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| ||
|short_description=p@chr10:124826487..124826609,- | |||
}} | }} |
Latest revision as of 00:16, 4 August 2015
Short description: | p@chr10:124826487..124826609, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:124826487..124826609, - |
Coexpression cluster: | MCL_coexpression_mm9:1011 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.48e-10 | 23 |
neuroblast (sensu Vertebrata) | 9.48e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 8.08e-19 | 54 |
neural tube | 1.15e-17 | 52 |
neural rod | 1.15e-17 | 52 |
future spinal cord | 1.15e-17 | 52 |
neural keel | 1.15e-17 | 52 |
central nervous system | 7.40e-16 | 73 |
gray matter | 1.61e-15 | 34 |
brain | 6.76e-15 | 47 |
future brain | 6.76e-15 | 47 |
neurectoderm | 1.05e-14 | 64 |
neural plate | 1.05e-14 | 64 |
presumptive neural plate | 1.05e-14 | 64 |
nervous system | 1.12e-14 | 75 |
regional part of brain | 2.52e-14 | 46 |
ecto-epithelium | 5.71e-14 | 73 |
anterior neural tube | 6.16e-14 | 40 |
ectoderm-derived structure | 1.82e-13 | 95 |
ectoderm | 1.82e-13 | 95 |
presumptive ectoderm | 1.82e-13 | 95 |
regional part of forebrain | 2.27e-13 | 39 |
forebrain | 2.27e-13 | 39 |
future forebrain | 2.27e-13 | 39 |
brain grey matter | 1.19e-12 | 29 |
regional part of telencephalon | 1.19e-12 | 29 |
telencephalon | 1.19e-12 | 29 |
pre-chordal neural plate | 1.43e-12 | 49 |
structure with developmental contribution from neural crest | 2.26e-10 | 92 |
cerebral cortex | 1.83e-09 | 21 |
cerebral hemisphere | 1.83e-09 | 21 |
pallium | 1.83e-09 | 21 |
occipital lobe | 4.90e-08 | 10 |
visual cortex | 4.90e-08 | 10 |
neocortex | 4.90e-08 | 10 |
regional part of cerebral cortex | 6.25e-08 | 17 |