FFCP PHASE1:Hg19::chr7:104654496..104654552,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100216545 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=35bp_to_NR_024586,uc003vck.2_5end | |||
|cluster_id=chr7:104654496..104654552,- | |||
|description=CAGE_peak_2_at_LOC100216545_5end | |||
|id=chr7:104654496..104654552,- | |||
|ontology_enrichment_celltype=CL:0000738!3.32e-18!140;CL:0000037!1.99e-17!172;CL:0000566!1.99e-17!172;CL:0000988!2.53e-16!182;CL:0002032!3.29e-16!165;CL:0000837!3.29e-16!165;CL:0002031!5.00e-15!124;CL:0002087!5.17e-15!119;CL:0000860!3.25e-13!45;CL:0002057!2.61e-12!42;CL:0000838!9.35e-10!52;CL:0000542!9.93e-10!53;CL:0000051!9.93e-10!53;CL:0000766!4.52e-08!76;CL:0000763!1.07e-07!112;CL:0000049!1.07e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-09;33!CL:0002057;1.14e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.06e-18,136;CL:0000037,2.01e-17,168;CL:0000988,1.73e-16,177;CL:0002032,3.35e-16,161;CL:0000837,3.35e-16,161;CL:0002031,4.76e-15,120;CL:0002087,5.65e-15,115;CL:0000860,2.37e-12,42;CL:0002057,2.37e-12,42;CL:0000473,7.02e-10,48;CL:0000234,7.02e-10,48;CL:0000838,8.67e-10,52;CL:0000542,9.22e-10,53;CL:0000051,9.22e-10,53;CL:0000766,4.59e-08,72;CL:0000763,1.20e-07,108;CL:0000049,1.20e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.30e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.76e-14!115;UBERON:0002390!1.77e-09!102;UBERON:0003061!1.77e-09!102;UBERON:0002193!3.83e-08!112;UBERON:0001049!3.26e-07!57;UBERON:0005068!3.26e-07!57;UBERON:0006241!3.26e-07!57;UBERON:0007135!3.26e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.30e-13,114;UBERON:0002390,2.30e-09,98;UBERON:0003061,2.30e-09,98;UBERON:0002193,5.37e-08,108;UBERON:0001049,5.05e-07,56;UBERON:0005068,5.05e-07,56;UBERON:0006241,5.05e-07,56;UBERON:0007135,5.05e-07,56 | |||
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| |||
|short_description=p2@LOC100216545 | |||
}} |
Latest revision as of 20:54, 24 September 2015
Short description: | p2@LOC100216545 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100216545_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_NR_024586, uc003vck.2_5end |
EntrezGene: | LOC100216545 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.06e-18 | 136 |
hematopoietic stem cell | 2.01e-17 | 168 |
hematopoietic cell | 1.73e-16 | 177 |
hematopoietic oligopotent progenitor cell | 3.35e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.35e-16 | 161 |
hematopoietic lineage restricted progenitor cell | 4.76e-15 | 120 |
nongranular leukocyte | 5.65e-15 | 115 |
classical monocyte | 2.37e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.37e-12 | 42 |
defensive cell | 7.02e-10 | 48 |
phagocyte | 7.02e-10 | 48 |
lymphoid lineage restricted progenitor cell | 8.67e-10 | 52 |
lymphocyte | 9.22e-10 | 53 |
common lymphoid progenitor | 9.22e-10 | 53 |
myeloid leukocyte | 4.59e-08 | 72 |
myeloid cell | 1.20e-07 | 108 |
common myeloid progenitor | 1.20e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.30e-13 | 114 |
hematopoietic system | 2.30e-09 | 98 |
blood island | 2.30e-09 | 98 |
hemolymphoid system | 5.37e-08 | 108 |
neural tube | 5.05e-07 | 56 |
neural rod | 5.05e-07 | 56 |
future spinal cord | 5.05e-07 | 56 |
neural keel | 5.05e-07 | 56 |