FFCP PHASE1:Mm9::chr2:152223469..152223512,-: Difference between revisions
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{{FFCP|EntrezGene=20667|HGNC=|UniProt=Q04890|association_with_transcript=269bp_to_ENSMUST00000063332,NM_011438,uc008nfi.1_5end|description=CAGE_peak_1_at_Sox12_5end|id=chr2:152223469..152223512,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!9.48e-09!333;UBERON:0000922!2.61e-08!328;UBERON:0000991!1.46e-07!18;UBERON:0005564!1.46e-07!18;UBERON:0004176!4.90e-07!17;UBERON:0009196!4.90e-07!17;UBERON:0009117!4.90e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000991,1.32e-07,18;UBERON:0005564,1.32e-07,18;UBERON:0004176,4.48e-07,17;UBERON:0009196,4.48e-07,17;UBERON:0009117,4.48e-07,17|phase1_expression=4.96461426024861,0,0,0,0,0.503637815735669,0.233612640595526,0.387369970324729,0.281577444303333,0.468129052643987,2.22583358693156,5.74359544766422,0,0.262261207256992,3.66420737997229,2.22722794128809,4.19737126876888,0.157731082679119,0.274228867211478,0.42438965179803,2.29616883407888,0.297872853602656,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0,6.35030673459631,8.61090702618398,0,0,1.66234645358492,1.42918549383658,0.418531630736908,0,0,0.588231488031014,0,0,3.39921408534059,3.14268486780495,3.12029478674859,10.1710874765245,3.48840250208714,3.07560655828261,1.36100929351998,2.79972843250725,0,0.335565212115473,0,0,2.31533492432352,2.86533439938757,1.54701627683233,10.3181395038395,5.28990979272033,13.9442908771359,5.76035704517525,3.55717918444456,0,0,0,5.09320187881288,5.76327457982332,15.3460626216547,14.0406175864958,12.8298226424343,7.9982275633065,6.62605622854841,12.4940615199253,11.5973019932066,10.1114066527102,2.20231761998777,2.17068474744819,1.84327839907492,13.1886287730194,11.618930737506,11.9810075228055,1.3959149950069,1.12552522006336,1.06958773443767,8.2496003932627,7.54569908235246,9.69277118291563,1.28734528666413,1.88928900266964,2.02905142091174,0,0.679971333707751,0.539703191637817,1.94932925234301,0.448026887097336,0.561777680527007,0,0,0,4.3661460130771,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,1.1418387971906,1.55362730188303,2.3750742250372,11.7970022200972,6.08930956624282,8.07154240396205,6.17962826265753,10.2302175208063,6.03199638382442,1.23597483867187,1.73519228303894,2.65383165584962,5.50007289821191,1.98757366614354,0.969750506270444,0,2.04946557908083,1.04723353406728,1.02182822083437,2.63593273913025,0.599902730993408,1.27070227073065,3.2953940669061,2.74500361691176,15.7067940141081,2.08589184230732,3.3243009452943,1.45451631191692,3.24482526135515,13.0354385728405,2.23932547098167,3.28539585963777,0.420883711772948,12.2313216384941,6.43725892413724,9.54329287968351,6.32960234910003,6.73561341598146,6.27757229395764,6.65282244374075,3.62184719034622,14.0119195406347,12.4810012910761,12.3165786914764,9.86380795924087,9.45360647367033,4.179025998266,5.35033554660653,12.7381930763836,0.702213187313235,1.80143534980301,0.568326998791185,12.2204205795946,14.3060896588469,9.7233513188948,10.4167683657493,9.64144735562279,10.6444307892291,8.8362899005155,8.58474884478781,9.80828875884224,10.8609500942897,5.25335885053105,5.51267904911819,2.33919979880532,4.17145219052996,3.08674763148855,2.52347938276953,13.5834088340655,0.330418782983798,0.528901133327089,13.650448034255,12.0763069367428,7.86091514064769,6.6555563125703,5.55945109612176,4.75564065281398,1.89811624617805,2.79988223030818,4.02136334080431,5.76973768919337,2.9244613067868,1.79763881730844,1.51296634912286,0.796565093017469,14.4147604724342,8.56863844572966,11.270773567308,10.1825663922657,9.89157684554891,9.32806404541237,6.00747102680444,3.24742325555125,3.29697328466887,2.71473760627961,2.96452627087149,7.84171996865642,5.30709286805648,4.27238013531222,4.46292267054706,5.788251834058,3.05551022137704,3.74004978686054,6.16113861745134,2.74561413188081,2.87536413054709,4.83783231969054,2.18426371180192,1.01031551178845,1.25578189465339,3.37710464954357,1.10851914099963,9.47457058852424,13.3631280682461,10.5241953180617,7.51008794523207,8.71032538697442,6.9032655856944,5.65887578787617,6.9359463406724,9.08005227559977,7.65382889555938,1.14704320301017,2.41758974612254,1.59113964439663,0,0,0,1.10374698521893,2.0871576698413,2.34423373184406,9.83609672260053,1.26235463602186,5.04813151066011,4.68526493155966,8.61693590931196,6.93009514062401,8.24355094104858,8.49229592366497,7.69140333182299,4.38383786866968,4.34816555741176,3.85585579706168,9.9358059645788,14.4233138970477,12.5422958702254,5.60898418106621,5.30980553359851,4.37005145078967,9.67435382287203,4.71512699389745,7.67784921490009,5.84126781093462,3.6179961043551,7.63420831902762,6.41695281092498,5.37262488490887,4.21674434299995,4.12542172992747,1.36175842301515,12.784337676223,12.6771510107099,8.3591443662321,7.09360934569094,6.0645397984704,6.41741180348272,5.48036908406279,1.64270195644597,0.21183207086382,5.29268155331909,2.14352128823924,3.87514624070173,5.06628569396509,2.98430860007841,1.96969079694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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20667 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q04890 | |||
|association_with_transcript=269bp_to_ENSMUST00000063332,NM_011438,uc008nfi.1_5end | |||
|cluster_id=chr2:152223469..152223512,- | |||
|description=CAGE_peak_1_at_Sox12_5end | |||
|id=chr2:152223469..152223512,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!9.48e-09!333;UBERON:0000922!2.61e-08!328;UBERON:0000991!1.46e-07!18;UBERON:0005564!1.46e-07!18;UBERON:0004176!4.90e-07!17;UBERON:0009196!4.90e-07!17;UBERON:0009117!4.90e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,1.32e-07,18;UBERON:0005564,1.32e-07,18;UBERON:0004176,4.48e-07,17;UBERON:0009196,4.48e-07,17;UBERON:0009117,4.48e-07,17 | |||
|phase1_expression=4.96461426024861,0,0,0,0,0.503637815735669,0.233612640595526,0.387369970324729,0.281577444303333,0.468129052643987,2.22583358693156,5.74359544766422,0,0.262261207256992,3.66420737997229,2.22722794128809,4.19737126876888,0.157731082679119,0.274228867211478,0.42438965179803,2.29616883407888,0.297872853602656,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0,6.35030673459631,8.61090702618398,0,0,1.66234645358492,1.42918549383658,0.418531630736908,0,0,0.588231488031014,0,0,3.39921408534059,3.14268486780495,3.12029478674859,10.1710874765245,3.48840250208714,3.07560655828261,1.36100929351998,2.79972843250725,0,0.335565212115473,0,0,2.31533492432352,2.86533439938757,1.54701627683233,10.3181395038395,5.28990979272033,13.9442908771359,5.76035704517525,3.55717918444456,0,0,0,5.09320187881288,5.76327457982332,15.3460626216547,14.0406175864958,12.8298226424343,7.9982275633065,6.62605622854841,12.4940615199253,11.5973019932066,10.1114066527102,2.20231761998777,2.17068474744819,1.84327839907492,13.1886287730194,11.618930737506,11.9810075228055,1.3959149950069,1.12552522006336,1.06958773443767,8.2496003932627,7.54569908235246,9.69277118291563,1.28734528666413,1.88928900266964,2.02905142091174,0,0.679971333707751,0.539703191637817,1.94932925234301,0.448026887097336,0.561777680527007,0,0,0,4.3661460130771,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,1.1418387971906,1.55362730188303,2.3750742250372,11.7970022200972,6.08930956624282,8.07154240396205,6.17962826265753,10.2302175208063,6.03199638382442,1.23597483867187,1.73519228303894,2.65383165584962,5.50007289821191,1.98757366614354,0.969750506270444,0,2.04946557908083,1.04723353406728,1.02182822083437,2.63593273913025,0.599902730993408,1.27070227073065,3.2953940669061,2.74500361691176,15.7067940141081,2.08589184230732,3.3243009452943,1.45451631191692,3.24482526135515,13.0354385728405,2.23932547098167,3.28539585963777,0.420883711772948,12.2313216384941,6.43725892413724,9.54329287968351,6.32960234910003,6.73561341598146,6.27757229395764,6.65282244374075,3.62184719034622,14.0119195406347,12.4810012910761,12.3165786914764,9.86380795924087,9.45360647367033,4.179025998266,5.35033554660653,12.7381930763836,0.702213187313235,1.80143534980301,0.568326998791185,12.2204205795946,14.3060896588469,9.7233513188948,10.4167683657493,9.64144735562279,10.6444307892291,8.8362899005155,8.58474884478781,9.80828875884224,10.8609500942897,5.25335885053105,5.51267904911819,2.33919979880532,4.17145219052996,3.08674763148855,2.52347938276953,13.5834088340655,0.330418782983798,0.528901133327089,13.650448034255,12.0763069367428,7.86091514064769,6.6555563125703,5.55945109612176,4.75564065281398,1.89811624617805,2.79988223030818,4.02136334080431,5.76973768919337,2.9244613067868,1.79763881730844,1.51296634912286,0.796565093017469,14.4147604724342,8.56863844572966,11.270773567308,10.1825663922657,9.89157684554891,9.32806404541237,6.00747102680444,3.24742325555125,3.29697328466887,2.71473760627961,2.96452627087149,7.84171996865642,5.30709286805648,4.27238013531222,4.46292267054706,5.788251834058,3.05551022137704,3.74004978686054,6.16113861745134,2.74561413188081,2.87536413054709,4.83783231969054,2.18426371180192,1.01031551178845,1.25578189465339,3.37710464954357,1.10851914099963,9.47457058852424,13.3631280682461,10.5241953180617,7.51008794523207,8.71032538697442,6.9032655856944,5.65887578787617,6.9359463406724,9.08005227559977,7.65382889555938,1.14704320301017,2.41758974612254,1.59113964439663,0,0,0,1.10374698521893,2.0871576698413,2.34423373184406,9.83609672260053,1.26235463602186,5.04813151066011,4.68526493155966,8.61693590931196,6.93009514062401,8.24355094104858,8.49229592366497,7.69140333182299,4.38383786866968,4.34816555741176,3.85585579706168,9.9358059645788,14.4233138970477,12.5422958702254,5.60898418106621,5.30980553359851,4.37005145078967,9.67435382287203,4.71512699389745,7.67784921490009,5.84126781093462,3.6179961043551,7.63420831902762,6.41695281092498,5.37262488490887,4.21674434299995,4.12542172992747,1.36175842301515,12.784337676223,12.6771510107099,8.3591443662321,7.09360934569094,6.0645397984704,6.41741180348272,5.48036908406279,1.64270195644597,0.21183207086382,5.29268155331909,2.14352128823924,3.87514624070173,5.06628569396509,2.98430860007841,1.96969079694074,0.582961673259701,2.59595422814714,1.19609616558497,12.7959858137198,4.8150577116125,3.39063222608444,2.87057878214153,1.60144721244566,1.18984900995699,1.25956307091292,1.52019971184866,5.72802370809068,17.556647643753,8.74273708645449,5.72428306355547,6.06356058441959,5.45906409365444,6.33862428008657,7.10819719237889,2.87931536182433,1.42576470620972,0,4.50954350947352,13.755522236046,11.4166358415397,16.7228021975881,10.4619457016962,15.7129196706424,17.0167996036343,15.754730566118,15.5191829750052,6.52277126230216,3.45636007509439,0.316011120628178,6.08175645870493,4.82741498674688,1.55904987573354,1.9692936523423,1.39076948346885,1.20195449519969,1.47689527174577,0.504832249740738,0.83827487320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| |||
|short_description=p1@Sox12 | |||
}} |
Latest revision as of 22:03, 25 September 2015
Short description: | p1@Sox12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sox12_5end |
Coexpression cluster: | NA |
Association with transcript: | 269bp_to_ENSMUST00000063332, NM_011438, uc008nfi.1_5end |
EntrezGene: | Sox12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 1.32e-07 | 18 |
gonad primordium | 1.32e-07 | 18 |
external genitalia | 4.48e-07 | 17 |
indifferent external genitalia | 4.48e-07 | 17 |
indifferent gonad | 4.48e-07 | 17 |