FFCP PHASE1:Mm9::chr2:150434226..150434237,-: Difference between revisions
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{{FFCP|EntrezGene=71881|HGNC=|MCL_coexpression_id=3|UniProt=Q9D7N9|association_with_transcript=21bp_to_NM_027977,uc008mud.1,uc008mue.1_5end|description=CAGE_peak_3_at_2310001A20Rik_5end|id=chr2:150434226..150434237,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.40e-10!52;UBERON:0005068!6.40e-10!52;UBERON:0006241!6.40e-10!52;UBERON:0007135!6.40e-10!52;UBERON:0002346!8.52e-10!71;UBERON:0003075!8.52e-10!71;UBERON:0007284!8.52e-10!71;UBERON:0002616!8.54e-09!49;UBERON:0000955!9.82e-09!50;UBERON:0006238!9.82e-09!50;UBERON:0002020!1.06e-08!34;UBERON:0000033!2.11e-08!63;UBERON:0004121!2.49e-08!102;UBERON:0000924!2.49e-08!102;UBERON:0006601!2.49e-08!102;UBERON:0002780!3.69e-08!39;UBERON:0001890!3.69e-08!39;UBERON:0006240!3.69e-08!39;UBERON:0003056!6.55e-08!49;UBERON:0003080!9.15e-08!40;UBERON:0000073!1.73e-07!75;UBERON:0001016!1.73e-07!75;UBERON:0001017!4.29e-07!73;UBERON:0005743!4.29e-07!73;UBERON:0002791!5.09e-07!29;UBERON:0003528!5.09e-07!29;UBERON:0001893!5.09e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.33e-11,54;UBERON:0001049,5.94e-10,52;UBERON:0005068,5.94e-10,52;UBERON:0006241,5.94e-10,52;UBERON:0007135,5.94e-10,52;UBERON:0002346,3.65e-09,64;UBERON:0003075,3.65e-09,64;UBERON:0007284,3.65e-09,64;UBERON:0002020,2.67e-08,34;UBERON:0002616,1.40e-07,46;UBERON:0010371,1.66e-07,73;UBERON:0001016,1.75e-07,75;UBERON:0001017,2.62e-07,73;UBERON:0000955,2.89e-07,47;UBERON:0006238,2.89e-07,47;UBERON:0002780,2.91e-07,39;UBERON:0001890,2.91e-07,39;UBERON:0006240,2.91e-07,39;UBERON:0003080,6.39e-07,40|phase1_expression=0.80074423552397,0,0,0.30246421130683,0,0,0.700837921786577,0.516493293766305,0.703943610758334,1.17032263160997,0.513653904676515,0.319088635981346,1.19840510951844,0.611942816932982,0.333109761815663,0.202475267389826,1.39912375625629,0.157731082679119,0.822686601634433,0,1.19060606211498,1.39007331681239,1.04479915655574,0.319984845586813,0.22940928106717,0,0.86152399231815,0.430942465371778,0.380046838912748,0.504060259519861,1.10865255327652,0,0,0,0,0.664938581433969,0,15.0671387065287,9.37602413428561,10.470474879476,9.99993529652724,12.294818729252,12.1377588257788,0.503587271902309,0.304130793658544,0.917733760808408,0,0.65407546914134,1.31811709640683,1.94429899074283,0.279972843250725,0,0.335565212115473,2.17608642603403,1.00828139742739,0.257259436035947,0.286533439938757,0,0.809265843438391,1.5869729378161,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,0.518448061542388,0.540023753326763,0.210324961351382,2.28520787523043,2.42955395046775,0.979926393719632,0.670918297127655,1.83843757322004,1.10115880999389,1.40456071893706,1.38245879930619,0.923204014111357,1.09785172322892,1.04182674111352,1.3959149950069,2.25105044012672,2.13917546887534,1.76777151284201,1.13897344639282,0.745597783301202,1.4387976733305,0.831287161174641,0,0.860423876981386,1.3599426674155,1.07940638327563,1.29955283489534,1.79210754838934,0.983110940922263,0.681721290312231,0.779358013808606,1.06001872353102,0.845060518660083,1.28326477414318,0,0,0,0,0,0.68510327831436,0.258937883647172,0.445326417194474,0.520455980298408,0.608930956624282,1.15307748628029,0.452167921657868,0.823120949949934,1.50799909595611,0.741584903203122,2.02439099687876,0.884610551949874,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,1.46612694769419,0.255457055208591,1.55759661857696,1.19980546198682,2.41433431438823,0.299581278809645,0.915001205637253,1.25654352112864,0.869121600961382,2.04572365864264,1.66230435647648,1.94689515681309,0.407357455401265,0.746441823660558,1.26361379216837,2.52530227063769,0.390361328888111,0.229902104433473,0.720248519221397,0.30140963567143,0.680364991513279,0.896796041993948,1.3118241438362,1.29351685369508,0.431135985865684,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0,0.199034266818493,2.1066395619397,1.80143534980301,2.55747149456033,0.207125772535502,0,0.180062061461015,0.473489471170421,0,0.308534225774757,0,0.536546802799238,0.467061369468678,0.658239399653922,0.492502392237286,0.648550476366846,0.730999937126662,0.878200461164203,1.47627060636409,1.47202963994889,0.720332286654991,0.660837565967596,0,0.426576501070468,0.232236671860439,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.397912944082302,0.779856348476481,1.79763881730844,0,0.398282546508734,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.701358198903186,1.3279672796094,2.06654207171443,2.98297582898612,2.96153193412321,0,0,0.196558995113203,0.449724224769707,0,1.20588579876208,0.50925170356284,0.575392274901621,1.78348749452539,1.64736847912849,0,0.744281895337007,0.936113019343682,0,0.179397413521912,0.964887042726734,0.739012760666419,0.568474235311454,0.325929952884052,0,0,0.335012514883631,0,0.585400943573396,0.630540576424764,0.44292937929755,0.637819074629948,0.98317988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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71881 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D7N9 | |||
|association_with_transcript=21bp_to_NM_027977,uc008mud.1,uc008mue.1_5end | |||
|cluster_id=chr2:150434226..150434237,- | |||
|description=CAGE_peak_3_at_2310001A20Rik_5end | |||
|id=chr2:150434226..150434237,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.40e-10!52;UBERON:0005068!6.40e-10!52;UBERON:0006241!6.40e-10!52;UBERON:0007135!6.40e-10!52;UBERON:0002346!8.52e-10!71;UBERON:0003075!8.52e-10!71;UBERON:0007284!8.52e-10!71;UBERON:0002616!8.54e-09!49;UBERON:0000955!9.82e-09!50;UBERON:0006238!9.82e-09!50;UBERON:0002020!1.06e-08!34;UBERON:0000033!2.11e-08!63;UBERON:0004121!2.49e-08!102;UBERON:0000924!2.49e-08!102;UBERON:0006601!2.49e-08!102;UBERON:0002780!3.69e-08!39;UBERON:0001890!3.69e-08!39;UBERON:0006240!3.69e-08!39;UBERON:0003056!6.55e-08!49;UBERON:0003080!9.15e-08!40;UBERON:0000073!1.73e-07!75;UBERON:0001016!1.73e-07!75;UBERON:0001017!4.29e-07!73;UBERON:0005743!4.29e-07!73;UBERON:0002791!5.09e-07!29;UBERON:0003528!5.09e-07!29;UBERON:0001893!5.09e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.33e-11,54;UBERON:0001049,5.94e-10,52;UBERON:0005068,5.94e-10,52;UBERON:0006241,5.94e-10,52;UBERON:0007135,5.94e-10,52;UBERON:0002346,3.65e-09,64;UBERON:0003075,3.65e-09,64;UBERON:0007284,3.65e-09,64;UBERON:0002020,2.67e-08,34;UBERON:0002616,1.40e-07,46;UBERON:0010371,1.66e-07,73;UBERON:0001016,1.75e-07,75;UBERON:0001017,2.62e-07,73;UBERON:0000955,2.89e-07,47;UBERON:0006238,2.89e-07,47;UBERON:0002780,2.91e-07,39;UBERON:0001890,2.91e-07,39;UBERON:0006240,2.91e-07,39;UBERON:0003080,6.39e-07,40 | |||
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| |||
|short_description=p3@2310001A20Rik | |||
}} |
Latest revision as of 21:27, 25 September 2015
Short description: | p3@2310001A20Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_2310001A20Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 21bp_to_NM_027977, uc008mud.1, uc008mue.1_5end |
EntrezGene: | 2310001A20Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 9.33e-11 | 54 |
neural tube | 5.94e-10 | 52 |
neural rod | 5.94e-10 | 52 |
future spinal cord | 5.94e-10 | 52 |
neural keel | 5.94e-10 | 52 |
neurectoderm | 3.65e-09 | 64 |
neural plate | 3.65e-09 | 64 |
presumptive neural plate | 3.65e-09 | 64 |
gray matter | 2.67e-08 | 34 |
regional part of brain | 1.40e-07 | 46 |
ecto-epithelium | 1.66e-07 | 73 |
nervous system | 1.75e-07 | 75 |
central nervous system | 2.62e-07 | 73 |
brain | 2.89e-07 | 47 |
future brain | 2.89e-07 | 47 |
regional part of forebrain | 2.91e-07 | 39 |
forebrain | 2.91e-07 | 39 |
future forebrain | 2.91e-07 | 39 |
anterior neural tube | 6.39e-07 | 40 |