FFCP PHASE1:Mm9::chr2:136942069..136942086,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=16449|HGNC=|MCL_coexpression_id=69|UniProt=Q3UVN4|association_with_transcript=-2bp_to_uc008moz.1_5end|description=CAGE_peak_4_at_Jag1_5end|id=chr2:136942069..136942086,-|ontology_enrichment_celltype=CL:0000117!5.40e-10!23;CL:0000337!5.40e-10!23;CL:0000221!5.44e-08!44;CL:0000133!5.44e-08!44;CL:0002319!2.30e-07!43;CL:0002609!9.26e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,2.35e-27,6;CL:0000117,5.11e-22,23;CL:0000337,5.11e-22,23;CL:0000221,7.88e-21,44;CL:0000133,7.88e-21,44;CL:0002319,2.52e-18,43;CL:0000540,6.69e-18,33;CL:0000047,6.69e-18,33;CL:0000031,6.69e-18,33;CL:0000404,6.69e-18,33;CL:0002608,6.22e-15,3;CL:0000393,7.49e-15,39;CL:0000211,7.49e-15,39;CL:0000120,8.23e-14,3;CL:0002321,3.44e-12,70;CL:0000197,9.58e-11,2;CL:0002491,9.58e-11,2;CL:0000098,9.58e-11,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.71e-10!102;UBERON:0000924!1.71e-10!102;UBERON:0006601!1.71e-10!102;UBERON:0000033!3.51e-10!63;UBERON:0001017!1.22e-08!73;UBERON:0005743!1.22e-08!73;UBERON:0000073!1.96e-08!75;UBERON:0001016!1.96e-08!75;UBERON:0002616!2.21e-07!49;UBERON:0000955!4.91e-07!50;UBERON:0006238!4.91e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.76e-11,73;UBERON:0001016,4.15e-11,75;UBERON:0004766,9.58e-11,2;UBERON:0008193,9.58e-11,2;UBERON:0005913,9.58e-11,2;UBERON:0011158,9.58e-11,2;UBERON:0005744,9.58e-11,2;UBERON:0003457,9.58e-11,2;UBERON:0008001,9.58e-11,2;UBERON:0007497,9.58e-11,2;UBERON:0009955,9.58e-11,2;UBERON:0003067,9.58e-11,2;UBERON:0002546,9.58e-11,2;UBERON:0007914,9.58e-11,2;UBERON:0005253,9.58e-11,2;UBERON:0002227,9.58e-11,2;UBERON:0001846,9.58e-11,2;UBERON:0004339,9.58e-11,2;UBERON:0002105,9.58e-11,2;UBERON:0001678,9.58e-11,2;UBERON:0003128,9.58e-11,2;UBERON:0001694,9.58e-11,2;UBERON:0004681,9.58e-11,2;UBERON:0001839,9.58e-11,2;UBERON:0001690,9.58e-11,2;UBERON:0001844,9.58e-11,2;UBERON:0001849,9.58e-11,2;UBERON:0002499,9.58e-11,2;UBERON:0001855,9.58e-11,2;UBERON:0011137,9.58e-11,2;UBERON:0001703,9.58e-11,2;UBERON:0010323,9.58e-11,2;UBERON:0003129,9.58e-11,2;UBERON:0003069,9.58e-11,2;UBERON:0003051,9.58e-11,2;UBERON:0004637,9.58e-11,2;UBERON:0004761,9.58e-11,2;UBERON:0010113,9.58e-11,2;UBERON:0009123,9.58e-11,2;UBERON:0010351,9.58e-11,2;UBERON:0009617,9.58e-11,2;UBERON:0005641,9.58e-11,2;UBERON:0010349,9.58e-11,2;UBERON:0004121,1.15e-09,95;UBERON:0000924,1.15e-09,95;UBERON:0006601,1.15e-09,95;UBERON:0003528,5.55e-09,29;UBERON:0002791,5.55e-09,29;UBERON:0001893,5.55e-09,29;UBERON:0002020,1.66e-07,34;UBERON:0000956,1.78e-07,21;UBERON:0001869,1.78e-07,21;UBERON:0000203,1.78e-07,21;UBERON:0000073,7.16e-07,54|phase1_expression=33.1508113506924,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0.588231488031014,0,0.485510353031154,0.125896817975577,0.202753862439029,0,0,1.74420125104357,0,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0,0,3.64169629547276,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,2.07379224616955,2.16009501330705,1.68259969081106,0,0.220868540951614,5.87955836231779,5.46319184803947,6.43453150627015,2.20231761998777,0.255374676170375,0.614426133024974,0.131886287730194,1.00636407962651,0,0.558365998002762,0,0.30559649555362,0,0.427115042397309,0.372798891650601,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,63.2386954797295,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.898743836428936,0.457500602818626,1.63350657746724,0.347648640384553,0,0.41557608911912,0.324482526135515,0.203678727700633,0,0,0,0.390361328888111,0.459804208866946,0.540186389416048,0.60281927134286,0.204109497453984,0.2562274405697,0.0937017245597288,0,0.431135985865684,0,0,0,0.556094498451196,0.696504333044333,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.617427674275707,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0.398282546508734,0,0.228497025219458,0,0,0,0.280543279561274,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0.339490171550376,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,1.50791283939272,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0.900305470156551,0.129358683782755,0,0,0,0,0,0,0.21183207086382,0,0,0.322928853391811,0.603129249281559,0.477489376012546,0.328281799490123,0,0.18542530201051,0,0.412773735926445,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,1.24544817101012,2.39414924040619,1.02440163452481,0.729320151204882,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0.114870937911227,0,0.231768651889711,0,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0,0,0,0.220591419119515,0|short_description=p4@Jag1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16449 | |||
|HGNC= | |||
|MCL_coexpression_id=69 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UVN4 | |||
|association_with_transcript=-2bp_to_uc008moz.1_5end | |||
|cluster_id=chr2:136942069..136942086,- | |||
|description=CAGE_peak_4_at_Jag1_5end | |||
|id=chr2:136942069..136942086,- | |||
|ontology_enrichment_celltype=CL:0000117!5.40e-10!23;CL:0000337!5.40e-10!23;CL:0000221!5.44e-08!44;CL:0000133!5.44e-08!44;CL:0002319!2.30e-07!43;CL:0002609!9.26e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.35e-27,6;CL:0000117,5.11e-22,23;CL:0000337,5.11e-22,23;CL:0000221,7.88e-21,44;CL:0000133,7.88e-21,44;CL:0002319,2.52e-18,43;CL:0000540,6.69e-18,33;CL:0000047,6.69e-18,33;CL:0000031,6.69e-18,33;CL:0000404,6.69e-18,33;CL:0002608,6.22e-15,3;CL:0000393,7.49e-15,39;CL:0000211,7.49e-15,39;CL:0000120,8.23e-14,3;CL:0002321,3.44e-12,70;CL:0000197,9.58e-11,2;CL:0002491,9.58e-11,2;CL:0000098,9.58e-11,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.71e-10!102;UBERON:0000924!1.71e-10!102;UBERON:0006601!1.71e-10!102;UBERON:0000033!3.51e-10!63;UBERON:0001017!1.22e-08!73;UBERON:0005743!1.22e-08!73;UBERON:0000073!1.96e-08!75;UBERON:0001016!1.96e-08!75;UBERON:0002616!2.21e-07!49;UBERON:0000955!4.91e-07!50;UBERON:0006238!4.91e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.76e-11,73;UBERON:0001016,4.15e-11,75;UBERON:0004766,9.58e-11,2;UBERON:0008193,9.58e-11,2;UBERON:0005913,9.58e-11,2;UBERON:0011158,9.58e-11,2;UBERON:0005744,9.58e-11,2;UBERON:0003457,9.58e-11,2;UBERON:0008001,9.58e-11,2;UBERON:0007497,9.58e-11,2;UBERON:0009955,9.58e-11,2;UBERON:0003067,9.58e-11,2;UBERON:0002546,9.58e-11,2;UBERON:0007914,9.58e-11,2;UBERON:0005253,9.58e-11,2;UBERON:0002227,9.58e-11,2;UBERON:0001846,9.58e-11,2;UBERON:0004339,9.58e-11,2;UBERON:0002105,9.58e-11,2;UBERON:0001678,9.58e-11,2;UBERON:0003128,9.58e-11,2;UBERON:0001694,9.58e-11,2;UBERON:0004681,9.58e-11,2;UBERON:0001839,9.58e-11,2;UBERON:0001690,9.58e-11,2;UBERON:0001844,9.58e-11,2;UBERON:0001849,9.58e-11,2;UBERON:0002499,9.58e-11,2;UBERON:0001855,9.58e-11,2;UBERON:0011137,9.58e-11,2;UBERON:0001703,9.58e-11,2;UBERON:0010323,9.58e-11,2;UBERON:0003129,9.58e-11,2;UBERON:0003069,9.58e-11,2;UBERON:0003051,9.58e-11,2;UBERON:0004637,9.58e-11,2;UBERON:0004761,9.58e-11,2;UBERON:0010113,9.58e-11,2;UBERON:0009123,9.58e-11,2;UBERON:0010351,9.58e-11,2;UBERON:0009617,9.58e-11,2;UBERON:0005641,9.58e-11,2;UBERON:0010349,9.58e-11,2;UBERON:0004121,1.15e-09,95;UBERON:0000924,1.15e-09,95;UBERON:0006601,1.15e-09,95;UBERON:0003528,5.55e-09,29;UBERON:0002791,5.55e-09,29;UBERON:0001893,5.55e-09,29;UBERON:0002020,1.66e-07,34;UBERON:0000956,1.78e-07,21;UBERON:0001869,1.78e-07,21;UBERON:0000203,1.78e-07,21;UBERON:0000073,7.16e-07,54 | |||
|phase1_expression=33.1508113506924,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0.588231488031014,0,0.485510353031154,0.125896817975577,0.202753862439029,0,0,1.74420125104357,0,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0,0,3.64169629547276,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,2.07379224616955,2.16009501330705,1.68259969081106,0,0.220868540951614,5.87955836231779,5.46319184803947,6.43453150627015,2.20231761998777,0.255374676170375,0.614426133024974,0.131886287730194,1.00636407962651,0,0.558365998002762,0,0.30559649555362,0,0.427115042397309,0.372798891650601,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,63.2386954797295,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.898743836428936,0.457500602818626,1.63350657746724,0.347648640384553,0,0.41557608911912,0.324482526135515,0.203678727700633,0,0,0,0.390361328888111,0.459804208866946,0.540186389416048,0.60281927134286,0.204109497453984,0.2562274405697,0.0937017245597288,0,0.431135985865684,0,0,0,0.556094498451196,0.696504333044333,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.617427674275707,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0.398282546508734,0,0.228497025219458,0,0,0,0.280543279561274,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0.339490171550376,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,1.50791283939272,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.659880491890142,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0.900305470156551,0.129358683782755,0,0,0,0,0,0,0.21183207086382,0,0,0.322928853391811,0.603129249281559,0.477489376012546,0.328281799490123,0,0.18542530201051,0,0.412773735926445,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,1.24544817101012,2.39414924040619,1.02440163452481,0.729320151204882,0.209613162627982,0.183843508450014,0.44449345560323,0,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0.114870937911227,0,0.231768651889711,0,0,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0,0,0,0.220591419119515,0 | |||
|short_description=p4@Jag1 | |||
}} |
Latest revision as of 19:39, 25 September 2015
Short description: | p4@Jag1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Jag1_5end |
Coexpression cluster: | MCL_coexpression_mm9:69 |
Association with transcript: | -2bp_to_uc008moz.1_5end |
EntrezGene: | Jag1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.35e-27 | 6 |
CNS neuron (sensu Vertebrata) | 5.11e-22 | 23 |
neuroblast (sensu Vertebrata) | 5.11e-22 | 23 |
ectodermal cell | 7.88e-21 | 44 |
neurectodermal cell | 7.88e-21 | 44 |
neural cell | 2.52e-18 | 43 |
neuron | 6.69e-18 | 33 |
neuronal stem cell | 6.69e-18 | 33 |
neuroblast | 6.69e-18 | 33 |
electrically signaling cell | 6.69e-18 | 33 |
hippocampal neuron | 6.22e-15 | 3 |
electrically responsive cell | 7.49e-15 | 39 |
electrically active cell | 7.49e-15 | 39 |
granule cell | 8.23e-14 | 3 |
embryonic cell | 3.44e-12 | 70 |
receptor cell | 9.58e-11 | 2 |
auditory epithelial cell | 9.58e-11 | 2 |
sensory epithelial cell | 9.58e-11 | 2 |