FFCP PHASE1:Mm9::chr2:127347094..127347111,-: Difference between revisions
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{{FFCP|EntrezGene=56461|HGNC=|MCL_coexpression_id=1|UniProt=A2AHT3,Q9QXT8,Q3YAB0|association_with_transcript=0bp_to_ENSMUST00000028850,ENSMUST00000103215,NM_019789,uc008mfm.1,uc008mfn.1_5end|description=CAGE_peak_2_at_Kcnip3_5end|id=chr2:127347094..127347111,-|ontology_enrichment_celltype=CL:0000540!1.27e-12!33;CL:0000047!1.27e-12!33;CL:0000031!1.27e-12!33;CL:0000404!1.27e-12!33;CL:0002319!2.18e-11!43;CL:0000117!4.06e-11!23;CL:0000337!4.06e-11!23;CL:0000221!4.27e-11!44;CL:0000133!4.27e-11!44;CL:0000393!7.50e-08!39;CL:0000211!7.50e-08!39;CL:0000055!5.45e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.94e-14,33;CL:0000047,2.94e-14,33;CL:0000031,2.94e-14,33;CL:0000404,2.94e-14,33;CL:0000117,1.60e-13,23;CL:0000337,1.60e-13,23;CL:0002319,1.76e-12,43;CL:0000221,6.78e-12,44;CL:0000133,6.78e-12,44;CL:0000393,3.02e-10,39;CL:0000211,3.02e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.64e-32!73;UBERON:0005743!2.64e-32!73;UBERON:0000073!1.79e-30!75;UBERON:0001016!1.79e-30!75;UBERON:0004121!1.74e-26!102;UBERON:0000924!1.74e-26!102;UBERON:0006601!1.74e-26!102;UBERON:0001049!2.45e-25!52;UBERON:0005068!2.45e-25!52;UBERON:0006241!2.45e-25!52;UBERON:0007135!2.45e-25!52;UBERON:0000955!1.48e-24!50;UBERON:0006238!1.48e-24!50;UBERON:0002346!2.09e-24!71;UBERON:0003075!2.09e-24!71;UBERON:0007284!2.09e-24!71;UBERON:0000033!4.64e-24!63;UBERON:0002616!7.01e-24!49;UBERON:0003056!1.13e-20!49;UBERON:0003080!5.12e-20!40;UBERON:0002780!2.19e-19!39;UBERON:0001890!2.19e-19!39;UBERON:0006240!2.19e-19!39;UBERON:0002020!1.22e-17!34;UBERON:0002791!4.53e-15!29;UBERON:0003528!4.53e-15!29;UBERON:0001893!4.53e-15!29;UBERON:0007811!3.75e-12!86;UBERON:0000956!2.17e-11!21;UBERON:0001869!2.17e-11!21;UBERON:0000203!2.17e-11!21;UBERON:0000153!1.29e-09!94;UBERON:0002619!2.90e-09!17;UBERON:0002021!5.03e-08!10;UBERON:0000411!5.03e-08!10;UBERON:0001950!5.03e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.06e-37,73;UBERON:0001016,6.88e-36,75;UBERON:0000073,8.17e-33,54;UBERON:0001049,4.34e-31,52;UBERON:0005068,4.34e-31,52;UBERON:0006241,4.34e-31,52;UBERON:0007135,4.34e-31,52;UBERON:0004121,6.23e-31,95;UBERON:0000924,6.23e-31,95;UBERON:0006601,6.23e-31,95;UBERON:0002346,7.86e-30,64;UBERON:0003075,7.86e-30,64;UBERON:0007284,7.86e-30,64;UBERON:0000955,1.17e-27,47;UBERON:0006238,1.17e-27,47;UBERON:0002616,7.91e-27,46;UBERON:0010371,4.27e-24,73;UBERON:0003080,5.69e-24,40;UBERON:0003056,6.47e-24,49;UBERON:0002780,3.47e-23,39;UBERON:0001890,3.47e-23,39;UBERON:0006240,3.47e-23,39;UBERON:0002020,5.48e-21,34;UBERON:0003528,8.87e-18,29;UBERON:0002791,8.87e-18,29;UBERON:0001893,8.87e-18,29;UBERON:0010314,1.11e-14,92;UBERON:0000956,3.54e-13,21;UBERON:0001869,3.54e-13,21;UBERON:0000203,3.54e-13,21;UBERON:0002619,1.56e-10,17;UBERON:0002021,1.18e-09,10;UBERON:0000411,1.18e-09,10;UBERON:0001950,1.18e-09,10;UBERON:0003076,1.83e-07,12;UBERON:0003057,1.83e-07,12|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0,0,0,0.837063261473815,0,1.0470474879476,0,0.683045484958446,0,0,0,0,0,3.48840250208714,1.09843091367236,0.777719596297134,0.839918529752175,1.43752564364972,0,0,0,0,0,0,5.26022798234954,7.93486468908049,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,6.2916023208865,6.53171119046643,7.36196247390191,6.34527910158946,7.36137364729837,9.99778445413313,8.61387309711293,3.06226998037385,5.46319184803947,1.83843757322004,8.8092704799511,19.7915374032041,13.8245879930619,4.2203612073662,4.48289453651807,2.6045668527838,10.6089539620525,6.75315132038016,9.62628960993904,7.95497180778903,6.83384067835694,4.28718725398191,0,0.151143120213571,0,0,0,0,0,0,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,1.48439043634778,0,1.7813056687779,0.520455980298408,0.304465478312141,1.15307748628029,0.60289056221049,0.470354828542819,0.376999773989026,0,0.144599356919912,0.884610551949874,0.323533699894818,0.441683036920787,0.969750506270444,0,32.7914492652933,34.977600037847,0,3.11519323715393,1.19980546198682,4.19331749341113,12.5824137100051,27.4500361691176,3.76963056338593,41.0225395653772,42.4487659168349,22.8566849015516,24.4984307232314,1.2220723662038,1.11966273549084,3.0326731012041,2.31486041475121,0.780722657776222,0.229902104433473,0.180062129805349,2.86339153887859,3.46986145671772,3.33095672740609,4.31027932974753,6.46758426847539,0.215567992932842,0.756424320671277,0.175951124163949,0.657587197282725,0,0,0,1.19420560091096,5.61770549850588,8.23513302767089,7.95657798307659,0.414251545071004,0,0.720248245844059,0.473489471170421,0.983821158737019,0.462801338662135,0,0,0,0.16455984991348,0.492502392237286,0,0,0,0.134206418760372,21.449574753541,6.89460902941206,0,0.264450566663544,2.77274725695804,2.78684006232526,3.60828891701861,3.42861991859682,1.55664630691409,1.52180500890047,0,0.988193728344065,0.502670417600539,0.994782360205754,1.36474860983384,0,0.648414149624083,0.995706366271836,1.51734320762465,0.799739588268102,1.1270773567308,0.610953983535943,0.969762435838129,0.420814919341911,0.822074982615345,0,0,0,0,0.166845105716094,0.589676985339609,0.674586337154561,0,0,0.50925170356284,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0,0,0,0,0.184753190166605,0.757965647081939,1.30371981153621,1.01847051465113,0.234690248288502,0.670025029767263,1.42826184531608,0.390267295715598,0.157635144106191,0,0.478364305972461,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,2.20749397043786,10.5963389391943,12.3072270921813,0,0,0.631016438832513,0.780877488593277,2.58508077279359,2.86762557543062,5.79276552614225,4.81230102341015,4.45291771842384,3.50707029493574,9.88219444866309,16.3873871375122,1.84522110770749,1.06839362200353,0,4.45419332025846,0,0.242780636154981,0.604647113929502,0.565815239267694,0.590603785761546,0.307435147943927,1.03371317267288,0,0.712994756769443,1.8962205476149,2.10837217149998,0,19.4050575279659,1.44048875225048,2.19909762430683,2.14337035031592,3.3694644392032,4.63758925765383,7.0756078858912,8.52501857520878,0,0,0.220528398054962,0.16488625294148,0,0.180938774784468,0.119372344003136,0.164140899745061,0.582961673259701,9.27126510052548,0.170870880797853,0,0.370389054739423,0.376736914009382,0,0.228778173206523,0.339956859987711,0.839708713941948,1.38199973804424,0,2.05618395827738,2.43983360552218,2.26811215725783,2.50905955217362,1.31017538247707,0.809186078308924,0.826534557253359,0.26175594198403,0.518459893167171,1.86401793926078,0,0.448549638131936,0.66183396182839,1.36115831840833,0.904118764344118,0.337912250981556,0.469428954583016,1.3020438484395,1.15345278868282,0,0.864090018773596,1.58005560314089,0.202725215290164,0.410843828659309,0.51968329191118,0,0,0.240390899039938,0.295379054349154,0.100966449948148,0.533447646584999,0.302478555410522,0.0974578807397524,0.288635524920988,0.350630706544707,0.453460767230423,0,0,0,1.54551675225752,1.68914227906064,3.11357761254351,0.428736758158132,0,15.2482997506608,27.6195141904306,21.7700295106971,19.7631159695241,34.9392085083028,27.1941803060292,31.7260575108949,40.0785870869556,36.2513927187364,31.583379016861,0.415149390336707,2.39414924040619,0.853668028770671,0.486213434136588,0.419226325255965,0.735374033800057,3.11145418922261,0.618105171716683,1.28367683836726,2.02157769411038,0.25347929989024,1.13175804831646,1.40462261204824,1.60062881012173,1.60819313075717,2.38146845641537,1.39061191133827,1.54327376370964,1.64834360321323,1.32479028120958,2.05721551431249,2.12970967391205,1.43061713968393,1.0174249164263,1.88218760830661,1.4384483341585,1.28049581010941,1.57841826862706,1.62964936615034,1.68342681497322,1.30498519936592,1.0835493061312,1.63692417267876,2.01417893541756,0.964533054905707,2.99772693525535,0.935726433781634,0.859484216193193,0.765153328275374,0.220591419119515,0.927471342481686|short_description=p2@Kcnip3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56461 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=A2AHT3,Q9QXT8,Q3YAB0 | |||
|association_with_transcript=0bp_to_ENSMUST00000028850,ENSMUST00000103215,NM_019789,uc008mfm.1,uc008mfn.1_5end | |||
|cluster_id=chr2:127347094..127347111,- | |||
|description=CAGE_peak_2_at_Kcnip3_5end | |||
|id=chr2:127347094..127347111,- | |||
|ontology_enrichment_celltype=CL:0000540!1.27e-12!33;CL:0000047!1.27e-12!33;CL:0000031!1.27e-12!33;CL:0000404!1.27e-12!33;CL:0002319!2.18e-11!43;CL:0000117!4.06e-11!23;CL:0000337!4.06e-11!23;CL:0000221!4.27e-11!44;CL:0000133!4.27e-11!44;CL:0000393!7.50e-08!39;CL:0000211!7.50e-08!39;CL:0000055!5.45e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.94e-14,33;CL:0000047,2.94e-14,33;CL:0000031,2.94e-14,33;CL:0000404,2.94e-14,33;CL:0000117,1.60e-13,23;CL:0000337,1.60e-13,23;CL:0002319,1.76e-12,43;CL:0000221,6.78e-12,44;CL:0000133,6.78e-12,44;CL:0000393,3.02e-10,39;CL:0000211,3.02e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.64e-32!73;UBERON:0005743!2.64e-32!73;UBERON:0000073!1.79e-30!75;UBERON:0001016!1.79e-30!75;UBERON:0004121!1.74e-26!102;UBERON:0000924!1.74e-26!102;UBERON:0006601!1.74e-26!102;UBERON:0001049!2.45e-25!52;UBERON:0005068!2.45e-25!52;UBERON:0006241!2.45e-25!52;UBERON:0007135!2.45e-25!52;UBERON:0000955!1.48e-24!50;UBERON:0006238!1.48e-24!50;UBERON:0002346!2.09e-24!71;UBERON:0003075!2.09e-24!71;UBERON:0007284!2.09e-24!71;UBERON:0000033!4.64e-24!63;UBERON:0002616!7.01e-24!49;UBERON:0003056!1.13e-20!49;UBERON:0003080!5.12e-20!40;UBERON:0002780!2.19e-19!39;UBERON:0001890!2.19e-19!39;UBERON:0006240!2.19e-19!39;UBERON:0002020!1.22e-17!34;UBERON:0002791!4.53e-15!29;UBERON:0003528!4.53e-15!29;UBERON:0001893!4.53e-15!29;UBERON:0007811!3.75e-12!86;UBERON:0000956!2.17e-11!21;UBERON:0001869!2.17e-11!21;UBERON:0000203!2.17e-11!21;UBERON:0000153!1.29e-09!94;UBERON:0002619!2.90e-09!17;UBERON:0002021!5.03e-08!10;UBERON:0000411!5.03e-08!10;UBERON:0001950!5.03e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.06e-37,73;UBERON:0001016,6.88e-36,75;UBERON:0000073,8.17e-33,54;UBERON:0001049,4.34e-31,52;UBERON:0005068,4.34e-31,52;UBERON:0006241,4.34e-31,52;UBERON:0007135,4.34e-31,52;UBERON:0004121,6.23e-31,95;UBERON:0000924,6.23e-31,95;UBERON:0006601,6.23e-31,95;UBERON:0002346,7.86e-30,64;UBERON:0003075,7.86e-30,64;UBERON:0007284,7.86e-30,64;UBERON:0000955,1.17e-27,47;UBERON:0006238,1.17e-27,47;UBERON:0002616,7.91e-27,46;UBERON:0010371,4.27e-24,73;UBERON:0003080,5.69e-24,40;UBERON:0003056,6.47e-24,49;UBERON:0002780,3.47e-23,39;UBERON:0001890,3.47e-23,39;UBERON:0006240,3.47e-23,39;UBERON:0002020,5.48e-21,34;UBERON:0003528,8.87e-18,29;UBERON:0002791,8.87e-18,29;UBERON:0001893,8.87e-18,29;UBERON:0010314,1.11e-14,92;UBERON:0000956,3.54e-13,21;UBERON:0001869,3.54e-13,21;UBERON:0000203,3.54e-13,21;UBERON:0002619,1.56e-10,17;UBERON:0002021,1.18e-09,10;UBERON:0000411,1.18e-09,10;UBERON:0001950,1.18e-09,10;UBERON:0003076,1.83e-07,12;UBERON:0003057,1.83e-07,12 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0.61506478758457,0,0,0,0,0.837063261473815,0,1.0470474879476,0,0.683045484958446,0,0,0,0,0,3.48840250208714,1.09843091367236,0.777719596297134,0.839918529752175,1.43752564364972,0,0,0,0,0,0,5.26022798234954,7.93486468908049,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,6.2916023208865,6.53171119046643,7.36196247390191,6.34527910158946,7.36137364729837,9.99778445413313,8.61387309711293,3.06226998037385,5.46319184803947,1.83843757322004,8.8092704799511,19.7915374032041,13.8245879930619,4.2203612073662,4.48289453651807,2.6045668527838,10.6089539620525,6.75315132038016,9.62628960993904,7.95497180778903,6.83384067835694,4.28718725398191,0,0.151143120213571,0,0,0,0,0,0,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,1.48439043634778,0,1.7813056687779,0.520455980298408,0.304465478312141,1.15307748628029,0.60289056221049,0.470354828542819,0.376999773989026,0,0.144599356919912,0.884610551949874,0.323533699894818,0.441683036920787,0.969750506270444,0,32.7914492652933,34.977600037847,0,3.11519323715393,1.19980546198682,4.19331749341113,12.5824137100051,27.4500361691176,3.76963056338593,41.0225395653772,42.4487659168349,22.8566849015516,24.4984307232314,1.2220723662038,1.11966273549084,3.0326731012041,2.31486041475121,0.780722657776222,0.229902104433473,0.180062129805349,2.86339153887859,3.46986145671772,3.33095672740609,4.31027932974753,6.46758426847539,0.215567992932842,0.756424320671277,0.175951124163949,0.657587197282725,0,0,0,1.19420560091096,5.61770549850588,8.23513302767089,7.95657798307659,0.414251545071004,0,0.720248245844059,0.473489471170421,0.983821158737019,0.462801338662135,0,0,0,0.16455984991348,0.492502392237286,0,0,0,0.134206418760372,21.449574753541,6.89460902941206,0,0.264450566663544,2.77274725695804,2.78684006232526,3.60828891701861,3.42861991859682,1.55664630691409,1.52180500890047,0,0.988193728344065,0.502670417600539,0.994782360205754,1.36474860983384,0,0.648414149624083,0.995706366271836,1.51734320762465,0.799739588268102,1.1270773567308,0.610953983535943,0.969762435838129,0.420814919341911,0.822074982615345,0,0,0,0,0.166845105716094,0.589676985339609,0.674586337154561,0,0,0.50925170356284,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0,0,0,0,0.184753190166605,0.757965647081939,1.30371981153621,1.01847051465113,0.234690248288502,0.670025029767263,1.42826184531608,0.390267295715598,0.157635144106191,0,0.478364305972461,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,2.20749397043786,10.5963389391943,12.3072270921813,0,0,0.631016438832513,0.780877488593277,2.58508077279359,2.86762557543062,5.79276552614225,4.81230102341015,4.45291771842384,3.50707029493574,9.88219444866309,16.3873871375122,1.84522110770749,1.06839362200353,0,4.45419332025846,0,0.242780636154981,0.604647113929502,0.565815239267694,0.590603785761546,0.307435147943927,1.03371317267288,0,0.712994756769443,1.8962205476149,2.10837217149998,0,19.4050575279659,1.44048875225048,2.19909762430683,2.14337035031592,3.3694644392032,4.63758925765383,7.0756078858912,8.52501857520878,0,0,0.220528398054962,0.16488625294148,0,0.180938774784468,0.119372344003136,0.164140899745061,0.582961673259701,9.27126510052548,0.170870880797853,0,0.370389054739423,0.376736914009382,0,0.228778173206523,0.339956859987711,0.839708713941948,1.38199973804424,0,2.05618395827738,2.43983360552218,2.26811215725783,2.50905955217362,1.31017538247707,0.809186078308924,0.826534557253359,0.26175594198403,0.518459893167171,1.86401793926078,0,0.448549638131936,0.66183396182839,1.36115831840833,0.904118764344118,0.337912250981556,0.469428954583016,1.3020438484395,1.15345278868282,0,0.864090018773596,1.58005560314089,0.202725215290164,0.410843828659309,0.51968329191118,0,0,0.240390899039938,0.295379054349154,0.100966449948148,0.533447646584999,0.302478555410522,0.0974578807397524,0.288635524920988,0.350630706544707,0.453460767230423,0,0,0,1.54551675225752,1.68914227906064,3.11357761254351,0.428736758158132,0,15.2482997506608,27.6195141904306,21.7700295106971,19.7631159695241,34.9392085083028,27.1941803060292,31.7260575108949,40.0785870869556,36.2513927187364,31.583379016861,0.415149390336707,2.39414924040619,0.853668028770671,0.486213434136588,0.419226325255965,0.735374033800057,3.11145418922261,0.618105171716683,1.28367683836726,2.02157769411038,0.25347929989024,1.13175804831646,1.40462261204824,1.60062881012173,1.60819313075717,2.38146845641537,1.39061191133827,1.54327376370964,1.64834360321323,1.32479028120958,2.05721551431249,2.12970967391205,1.43061713968393,1.0174249164263,1.88218760830661,1.4384483341585,1.28049581010941,1.57841826862706,1.62964936615034,1.68342681497322,1.30498519936592,1.0835493061312,1.63692417267876,2.01417893541756,0.964533054905707,2.99772693525535,0.935726433781634,0.859484216193193,0.765153328275374,0.220591419119515,0.927471342481686 | |||
|short_description=p2@Kcnip3 | |||
}} |
Latest revision as of 16:34, 25 September 2015
Short description: | p2@Kcnip3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kcnip3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000028850, ENSMUST00000103215, NM_019789, uc008mfm.1, uc008mfn.1_5end |
EntrezGene: | Kcnip3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.94e-14 | 33 |
neuronal stem cell | 2.94e-14 | 33 |
neuroblast | 2.94e-14 | 33 |
electrically signaling cell | 2.94e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.60e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.60e-13 | 23 |
neural cell | 1.76e-12 | 43 |
ectodermal cell | 6.78e-12 | 44 |
neurectodermal cell | 6.78e-12 | 44 |
electrically responsive cell | 3.02e-10 | 39 |
electrically active cell | 3.02e-10 | 39 |