FFCP PHASE1:Hg19::chr6:73785930..73785949,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:73785930..73785949,- | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_at_chr6:73785930..73785949,- | |||
|id=chr6:73785930..73785949,- | |||
|ontology_enrichment_celltype=CL:0000322!3.38e-25!3;CL:0000082!1.11e-15!19;CL:0002202!4.61e-09!9;CL:0002632!4.61e-09!9;CL:0000223!1.09e-07!59;CL:0002579!2.47e-07!3;CL:0002231!3.35e-07!3;CL:0000181!6.74e-07!12;CL:0000417!6.74e-07!12;CL:0000668!6.74e-07!12;CL:0000414!6.74e-07!12;CL:0000412!6.74e-07!12;CL:0000182!6.74e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000082;1.48e-19;19!CL:0000322;1.22e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,1.58e-19,19;CL:0000322,1.22e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.01e-13;29!UBERON:0001041;1.03e-12;30 | |||
|ontology_enrichment_disease=DOID:3910!3.28e-37!2;DOID:3908!2.49e-33!5;DOID:3905!1.37e-32!9;DOID:0050615!1.68e-28!16;DOID:1325!5.66e-24!7;DOID:3904!5.66e-24!7;DOID:1324!9.42e-20!15;DOID:0050619!1.08e-19!1;DOID:1357!1.08e-19!1;DOID:4556!2.05e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.21e-40;1!DOID:1357;1.21e-40;1!DOID:3905;3.80e-40;9!DOID:0050615;4.99e-40;16!DOID:3908;1.14e-32;5!DOID:1324;1.65e-24;15!DOID:1325;1.36e-23;7!DOID:3904;1.36e-23;7!DOID:3910;3.11e-21;2!DOID:4556;1.50e-14;3!DOID:5409;3.60e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.91e-41,1;DOID:1357,9.91e-41,1;DOID:3905,4.35e-40,9;DOID:0050615,5.24e-40,16;DOID:3908,1.23e-32,5;DOID:1324,1.78e-24,15;DOID:1325,1.44e-23,7;DOID:3904,1.44e-23,7;DOID:3910,3.11e-21,2;DOID:4556,1.60e-14,3;DOID:5409,3.79e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0004903!3.28e-37!2;UBERON:0002173!3.28e-37!2;UBERON:0002186!3.28e-37!2;UBERON:0004821!3.38e-25!3;UBERON:0003215!3.38e-25!3;UBERON:0002299!3.38e-25!3;UBERON:0006524!3.38e-25!3;UBERON:0008874!3.38e-25!3;UBERON:0002169!3.38e-25!3;UBERON:0004894!3.38e-25!3;UBERON:0001764!1.08e-19!1;UBERON:0001825!1.08e-19!1;UBERON:0004802!1.11e-15!19;UBERON:0000115!1.11e-15!19;UBERON:0002048!1.35e-13!22;UBERON:0000117!1.35e-13!22;UBERON:0000171!1.35e-13!22;UBERON:0000170!1.35e-13!22;UBERON:0005597!1.35e-13!22;UBERON:0000118!1.35e-13!22;UBERON:0005153!2.52e-12!37;UBERON:0007499!6.76e-12!25;UBERON:0009856!1.88e-11!26;UBERON:0004807!9.32e-11!28;UBERON:0005911!1.85e-10!82;UBERON:0005157!5.85e-09!51;UBERON:0005178!6.52e-09!34;UBERON:0002224!6.52e-09!34;UBERON:0000466!9.98e-09!126;UBERON:0005181!1.15e-08!35;UBERON:0008947!5.29e-08!38;UBERON:0003258!5.29e-08!38;UBERON:0009569!1.66e-07!113;UBERON:0000060!5.15e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.21e-40;1!UBERON:0001825;1.21e-40;1!UBERON:0004903;3.11e-21;2!UBERON:0002173;3.11e-21;2!UBERON:0002186;3.11e-21;2!UBERON:0004802;1.48e-19;19!UBERON:0000115;1.48e-19;19!UBERON:0002048;5.13e-17;22!UBERON:0004807;5.13e-17;22!UBERON:0000117;5.13e-17;22!UBERON:0000171;5.13e-17;22!UBERON:0000170;5.13e-17;22!UBERON:0004821;1.22e-14;3!UBERON:0007499;1.22e-14;3!UBERON:0003215;1.22e-14;3!UBERON:0010368;1.22e-14;3!UBERON:0009911;1.22e-14;3!UBERON:0002299;1.22e-14;3!UBERON:0006524;1.22e-14;3!UBERON:0008874;1.22e-14;3!UBERON:0002169;1.22e-14;3!UBERON:0004894;1.22e-14;3!UBERON:0005178;1.98e-11;34!UBERON:0002224;1.98e-11;34!UBERON:0009856;2.53e-11;4!UBERON:0005181;2.12e-10;35!UBERON:0005911;9.91e-09;36!UBERON:0000065;1.78e-08;44!UBERON:0000072;6.22e-08;37!UBERON:0001004;1.04e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,9.91e-41,1;UBERON:0001825,9.91e-41,1;UBERON:0004903,3.11e-21,2;UBERON:0002173,3.11e-21,2;UBERON:0002186,3.11e-21,2;UBERON:0004802,1.58e-19,19;UBERON:0000115,1.58e-19,19;UBERON:0002048,5.41e-17,22;UBERON:0000117,5.41e-17,22;UBERON:0000171,5.41e-17,22;UBERON:0000170,5.41e-17,22;UBERON:0005597,5.41e-17,22;UBERON:0000118,5.41e-17,22;UBERON:0004821,1.22e-14,3;UBERON:0003215,1.22e-14,3;UBERON:0010368,1.22e-14,3;UBERON:0009911,1.22e-14,3;UBERON:0002299,1.22e-14,3;UBERON:0006524,1.22e-14,3;UBERON:0008874,1.22e-14,3;UBERON:0002169,1.22e-14,3;UBERON:0004894,1.22e-14,3;UBERON:0004807,1.53e-13,28;UBERON:0005178,2.66e-11,34;UBERON:0002224,2.66e-11,34;UBERON:0005181,5.30e-11,35;UBERON:0005153,1.89e-10,37;UBERON:0008947,3.38e-10,38;UBERON:0003258,3.38e-10,38;UBERON:0001004,3.00e-09,74;UBERON:0000072,2.16e-08,47;UBERON:0005157,2.16e-08,47;UBERON:0000915,1.18e-07,52;UBERON:0000065,2.12e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1736664232553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42880773994635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66991963625398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01651473835064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:73785930..73785949,- | |||
}} |
Latest revision as of 03:03, 31 July 2015
Short description: | p@chr6:73785930..73785949, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:73785930..73785949, - |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 1.58e-19 | 19 |
pneumocyte | 1.22e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 9.91e-41 | 1 |
paranasal sinus | 9.91e-41 | 1 |
bronchoalveolar duct junction | 3.11e-21 | 2 |
alveolar duct | 3.11e-21 | 2 |
bronchiole | 3.11e-21 | 2 |
respiratory tract epithelium | 1.58e-19 | 19 |
lung epithelium | 1.58e-19 | 19 |
lung | 5.41e-17 | 22 |
respiratory tube | 5.41e-17 | 22 |
respiration organ | 5.41e-17 | 22 |
pair of lungs | 5.41e-17 | 22 |
lung primordium | 5.41e-17 | 22 |
lung bud | 5.41e-17 | 22 |
pulmonary alveolus epithelium | 1.22e-14 | 3 |
alveolus | 1.22e-14 | 3 |
pulmonary lobule | 1.22e-14 | 3 |
lobule | 1.22e-14 | 3 |
alveolus of lung | 1.22e-14 | 3 |
alveolar system | 1.22e-14 | 3 |
pulmonary acinus | 1.22e-14 | 3 |
alveolar sac | 1.22e-14 | 3 |
alveolar wall | 1.22e-14 | 3 |
respiratory system epithelium | 1.53e-13 | 28 |
thoracic cavity element | 2.66e-11 | 34 |
thoracic cavity | 2.66e-11 | 34 |
thoracic segment organ | 5.30e-11 | 35 |
epithelial bud | 1.89e-10 | 37 |
respiratory primordium | 3.38e-10 | 38 |
endoderm of foregut | 3.38e-10 | 38 |
respiratory system | 3.00e-09 | 74 |
segment of respiratory tract | 2.16e-08 | 47 |
epithelial fold | 2.16e-08 | 47 |
thoracic segment of trunk | 1.18e-07 | 52 |
respiratory tract | 2.12e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 9.91e-41 | 1 |
maxillary sinus cancer | 9.91e-41 | 1 |
lung carcinoma | 4.35e-40 | 9 |
respiratory system cancer | 5.24e-40 | 16 |
non-small cell lung carcinoma | 1.23e-32 | 5 |
lung cancer | 1.78e-24 | 15 |
bronchus cancer | 1.44e-23 | 7 |
bronchogenic carcinoma | 1.44e-23 | 7 |
lung adenocarcinoma | 3.11e-21 | 2 |
lung large cell carcinoma | 1.60e-14 | 3 |
lung small cell carcinoma | 3.79e-11 | 4 |