FFCP PHASE1:Hg19::chr6:47277620..47277631,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27242 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13469 | |||
|TSSclassifier=strong | |||
|UniProt=O75509 | |||
|association_with_transcript=9bp_to_ENST00000296861_5end | |||
|cluster_id=chr6:47277620..47277631,- | |||
|coexpression_cluster_id=C4609 | |||
|description=CAGE_peak_3_at_TNFRSF21_5end | |||
|id=chr6:47277620..47277631,- | |||
|ontology_enrichment_celltype=CL:0000066!5.45e-15!254;CL:0000223!3.19e-09!59;CL:0002076!6.87e-09!43;CL:0000220!2.95e-07!246;CL:0002321!3.29e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.15e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.36e-13,253;CL:0000223,2.40e-09,58;CL:0002076,1.05e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!7.89e-30!625;UBERON:0000480!2.32e-29!626;UBERON:0000468!4.38e-28!659;UBERON:0000922!7.56e-24!612;UBERON:0002050!1.11e-23!605;UBERON:0005423!1.11e-23!605;UBERON:0000923!1.91e-23!604;UBERON:0005291!1.91e-23!604;UBERON:0006598!1.91e-23!604;UBERON:0002532!1.91e-23!604;UBERON:0004111!4.17e-23!241;UBERON:0000062!1.91e-20!511;UBERON:0000475!7.92e-19!365;UBERON:0000025!1.25e-18!194;UBERON:0000477!3.95e-18!286;UBERON:0000119!1.28e-17!312;UBERON:0000483!2.89e-17!309;UBERON:0000481!1.00e-13!347;UBERON:0000064!2.37e-11!219;UBERON:0002100!5.84e-11!216;UBERON:0004119!9.54e-11!169;UBERON:0000925!9.54e-11!169;UBERON:0006595!9.54e-11!169;UBERON:0003914!8.38e-10!118;UBERON:0000466!9.28e-10!126;UBERON:0001017!1.16e-08!82;UBERON:0001049!1.20e-08!57;UBERON:0005068!1.20e-08!57;UBERON:0006241!1.20e-08!57;UBERON:0007135!1.20e-08!57;UBERON:0001007!2.88e-08!155;UBERON:0001555!2.88e-08!155;UBERON:0007026!2.88e-08!155;UBERON:0004121!3.42e-08!169;UBERON:0005743!3.73e-08!86;UBERON:0002616!6.88e-08!59;UBERON:0000955!7.01e-08!69;UBERON:0006238!7.01e-08!69;UBERON:0004921!9.16e-08!129;UBERON:0004185!9.16e-08!129;UBERON:0003104!1.02e-07!238;UBERON:0009142!1.02e-07!238;UBERON:0000926!1.62e-07!448;UBERON:0004120!1.62e-07!448;UBERON:0006603!1.62e-07!448;UBERON:0000033!1.95e-07!123;UBERON:0009569!2.46e-07!113;UBERON:0000464!2.86e-07!104;UBERON:0005177!2.94e-07!107;UBERON:0000924!4.37e-07!173;UBERON:0006601!4.37e-07!173;UBERON:0005911!6.24e-07!82;UBERON:0000077!6.60e-07!130;UBERON:0000153!8.87e-07!129;UBERON:0007811!8.87e-07!129;UBERON:0005256!9.08e-07!143 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.31e-21,240;UBERON:0000025,9.64e-18,192;UBERON:0000922,1.19e-17,592;UBERON:0005423,2.17e-17,581;UBERON:0000119,9.38e-16,309;UBERON:0000483,2.07e-15,306;UBERON:0002050,2.60e-15,564;UBERON:0000923,2.89e-14,560;UBERON:0010316,2.89e-14,560;UBERON:0005291,2.89e-14,560;UBERON:0006598,2.89e-14,560;UBERON:0010317,2.89e-14,560;UBERON:0002532,2.89e-14,560;UBERON:0011216,3.74e-12,223;UBERON:0003914,1.00e-09,117;UBERON:0004119,1.93e-09,160;UBERON:0000925,1.93e-09,160;UBERON:0006595,1.93e-09,160;UBERON:0002100,2.67e-09,199;UBERON:0001049,2.84e-08,56;UBERON:0005068,2.84e-08,56;UBERON:0006241,2.84e-08,56;UBERON:0007135,2.84e-08,56;UBERON:0001017,5.20e-08,81;UBERON:0004921,2.35e-07,118;UBERON:0009569,2.47e-07,112;UBERON:0000955,3.47e-07,68;UBERON:0006238,3.47e-07,68;UBERON:0001007,4.15e-07,145;UBERON:0001555,4.15e-07,145;UBERON:0007026,4.15e-07,145;UBERON:0010371,4.19e-07,104;UBERON:0000073,4.37e-07,53;UBERON:0002616,4.37e-07,53;UBERON:0005911,8.70e-07,82 | |||
|phase1_expression=4.36028110249336,7.70761886007539,7.47058341708647,4.00293193412522,9.83314407740033,2.61701557230111,7.59899634504932,10.1075179748293,12.5369101535922,3.93174298402414,8.37361401566913,4.58726881473362,8.44054330331051,1.60896258848061,1.98838425436749,13.4465029290355,10.8485015044316,10.2243412654232,9.27072317701963,1.96993692922861,1.63200552995402,1.56727360739044,0.286235987131057,0.273748850145768,0.627713197974014,0.382067028739756,0.164201178899891,0.314843125254717,0.393364276848904,2.30297638858328,12.6949221119182,0.919421224478927,11.4458249135735,11.4623743151704,0.154934401160603,0.142169232487422,1.76160263600908,9.41792194504192,5.01361118675354,2.82114131930607,3.58264758783879,3.2389366601898,3.8636335145128,0.872389432677388,1.13362783106643,0.970336244751265,2.09186133215116,0.411167888021826,0,0.863077176966451,0.768482119587302,0.236482229888585,1.37898272294647,0.645484683583826,1.35426486594342,3.20011977222428,1.63743690034707,0,2.75475503133812,1.60464513538047,1.91801137739712,0.989553900560148,0.997318288108159,0,1.45104619314292,1.70215567407342,1.24564449799115,1.50749199154046,0.521482918420201,1.08594422352558,2.42159801053347,0.368277635987565,0.632924774881769,0.845021145247767,0.850417199860174,1.04829322754188,1.23561494261145,1.65194582125657,0.16072558669708,1.42506371870624,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0664806419773,2.68280343881454,1.53435074212236,0.722878304769133,0,0.579386075843295,0.795285947051099,0.486634870302636,0.189069634328136,1.10864698731282,0.966182642624386,7.40031776562076,14.5718115317017,8.15725774125745,6.81549526674835,7.48757870386849,5.05240249971688,35.2966123971906,41.1836335761692,27.1163975970582,6.16163462836786,7.74211135595512,2.08284300964557,4.52246353539208,11.7459842138774,7.42818713238182,7.10582886225156,7.49408601591054,7.47109151642091,14.7277069616455,10.0707329277287,11.4040815857777,22.9418334095279,4.04429388380456,11.3419872703446,0.625098097988558,0.44905874525234,1.0135033243499,7.66583187329416,3.79706263827252,3.29763139074733,0,0,40.5567468492557,0.496971951695318,3.41902381494365,1.19168262731897,0.573673241497627,0.709336764396714,6.16745360156538,5.33744978648525,6.66002380726332,24.2744607611818,2.82892411346345,4.25000948094993,8.32465852047123,12.67587033856,2.10889288650417,11.5499228427219,4.56377457235559,2.24173020827702,0.352303495931295,0.647491777472526,0.280901613404497,3.87892925384297,0.982674538494144,3.40975077880026,1.18800285728205,1.23633464639278,4.55080680969013,5.74894513452991,0.336672227908132,1.00094815897571,6.09541054065202,1.31693286264251,0.919463387397059,0.901428353439581,2.60894021268048,1.79389635688862,2.13557388818567,3.81477422087211,2.10063767259082,0.721367704669072,0,1.67505170698431,1.5189869901714,0.292311015483596,1.26216887122057,2.02509777013059,0.484938170456436,1.77504796258307,1.30977727695932,0.508681776931463,7.92369497969517,14.4555443913142,12.9062067925052,1.58565817968474,2.12047629314376,0.929551542956147,2.38420426535352,1.26160425437814,0.36497735907583,23.4674298494724,6.43240938192885,12.4321429217232,1.39310378409594,0.721879481669586,1.30137480043828,1.34867752062481,1.92808823906786,0.992645754591546,1.52515610864684,1.18635309555548,0.943819157121151,0.784885860501384,0.38474715694639,2.95262181849859,8.41450642820675,8.231480226628,8.82052268313252,0,0,0.590789906681404,0,7.99424850530238,1.3725424823882,12.4017822511747,3.37205259772859,2.81481122752566,26.2025299798639,0.651616610620649,0,1.44331342025273,0.463721619900307,4.93116515790451,6.49649014924832,4.1668696131895,5.32711626256875,3.1608175918371,1.71697232418975,4.92434012174795,17.5503198854428,7.72882043901387,7.49870671894216,9.23901705093727,6.80520466763455,8.50805965677059,8.4283842169049,11.1180976957911,1.97065295158377,4.57851856868775,44.7828729568068,53.0361428574418,37.872730027914,0.317489471460845,0,0,1.71072446022705,0.411309970813294,0,0,5.7186853016134,3.05172048183296,3.0802080044799,1.16344544182,0,0,2.12750493267896,2.08014873822732,0.514414748524284,0,1.0656887160644,6.57698770827479,31.4720531127037,1.64648067356154,0.65147236858747,8.17401482107855,0.791951872933429,42.5029521654016,24.4029368408082,45.1877920142898,4.86495122564762,6.02708509718552,2.10833939483032,0,0,0,0.868687840005475,1.64381058040307,2.50685348535854,0,0.197030760201927,0.215627574859517,0.641715181398742,1.27047312111232,5.20559415430487,1.54657762555539,1.50764638800914,1.91381625495949,0,0,0,0.981531933753119,1.00034104211935,0.542530047399471,1.66376689224646,0.178428988797162,1.41932173530541,0.585707074963566,0.601892199455438,0,0,0.664225598535437,0.921845842708516,2.08520674723399,8.81105208582333,8.5785855952714,1.03384013061444,0.862856803274467,1.60091336705167,0.606255142892519,11.6504807657348,8.16453791990137,4.96215615637554,2.455391572609,2.80660094433074,5.38184426873944,1.53512174720011,6.11244900345709,7.42090332224955,1.54209693802656,2.13074070375753,0.821271560138091,4.67328986265259,0.116210378459959,6.5264102779476,15.8400111539595,17.9557928424998,1.83703117063371,1.45672934405374,1.70461739447251,13.5359883872224,5.62211960862228,7.84349769176855,8.76835347919564,8.44413031143006,2.27466768141793,2.72149928442425,2.80690690932781,3.08454505380579,2.43851793789468,3.01013864312912,6.37190682612596,8.31076008928724,4.70136984916574,0,0,0.512900250232778,2.62411716559765,1.62689197332152,2.88514832613622,5.4941678891006,4.95056999523528,18.3764972158775,12.3511446746939,1.6068392984416,0.870036464629098,1.54048617114644,2.76306614507033,0.275673144969061,0.859361958946189,0.870100163485371,1.10794615640931,1.24644849905432,6.94196644516108,5.57351195358808,6.76347376221296,9.71114696213279,0.464845549297286,0.94443704049192,6.2733354314454,2.7723022215848,2.66153015158511,6.08953094452551,7.59829298326072,1.43124886741991,2.97726695487734,0.632758849437452,4.00323407240032,2.55897791311334,2.1396949401696,3.18203247925937,1.56989728039846,2.15846949099978,4.11805544604082,3.06312246098785,3.841467149893,4.75530963519025,1.68503382495592,1.46290121726877,4.38684281336312,0,1.36499911407986,2.2624869112594,5.65040583101214,6.06501877900737,7.96126770289464,9.64591947558278,5.20897980840019,5.24715801637306,8.11641507850816,3.0982349809975,0.845086807596724,1.00387946542836,2.25972794330179,8.56010523555001,0.709522128141196,0,0,1.13841952129715,0.699869440489966,8.17887958166853,10.0545341330368,7.62236894029258,1.60044461320525,24.5388062422601,23.5860065934676,45.2298756607409,20.6751060186264,0,0,0,0,0,0,0,0,0.534120355637366,0,3.92064345569651,0,0.28853842595289,1.70740424036194,0,0,0,0,0.324621940274555,0.280797178113459,0,0,0,0,0,0,0,0,0,0.894704431569664,0.500547425135725,0.781552381608161,0,0,0.270455678475983,0,0,6.36277837387947,3.80921266106924,0.121360521749513,0,0.568272293612826,15.0409025384745,7.7210817016486,11.6721066797708,0.994147647766298,3.65740482667333,4.67496561096205,0,0,3.18796781201712,1.38141957765574,0.755798243562828,0.409074730008619,1.96935688737711,1.24415835064723,26.2415585350194,12.8895245766439,1.02314474045374,8.68061969605016,2.3948309234694,4.44547960578548,9.69332746095218,8.90573742353772,5.98841394003583,1.04171104434093,0.699679999969566,3.62499787717397,8.42071517312698,14.4924580666877,7.56440581657396,2.06846023944879,0.291604613383254,0.173624994933292,2.65722415744152,2.41192877250816,6.10326945268333,4.86548743697388,5.02430952221031,3.72955175161753,0.871507708151921,5.85579725970134,2.00070672109872,6.03892895989106,4.6112780877612,5.56497395340587,4.78048436456836,5.74202087517455,5.49585560411174,5.33034776018635,0,0,0,0,0,0.167821586975843,0.189753732724185,0.158936578980379,1.26598838716816,5.54991547741102,3.95788600015034,0.216388639742091,7.96209544862804,3.62676014463691,3.66618086960175,0.593042257361244,0.247127877893006,0.313265848516366,15.7718651174784,1.60515529459758,12.8845445148937,0,5.86993856796269,0,0.789168805698781,4.83962864194656,0.91821828489147,5.49723242767845,1.80388103297391,4.45859223008163,3.32326936353593,2.31694369112849,4.70899377610838,1.19472429772959,27.0379068728303,2.4961441142365,5.55391162672419,32.0435139545015,2.96001302373369,2.62090002363045,0,2.03188295707079,1.75414361006845,4.10577285266046,3.78257164304836,0,4.06765333404958,7.40026393092455,1.78843150532691,8.9268222297789,5.67099009930929,12.5047759592393,5.76323085796252,28.5727741702446,28.9621738479753,0,2.74551996579143,2.88109595976299,6.21262677827163,1.88555227693436,1.76675467895698,1.569042694685,4.18192692308919,3.75635766871975,3.60252173225874,5.20240439789574,3.83239764200917,8.16554338697919,0.788662062837943,3.90995361781156,1.3749625440701,0,2.39614800598789,0.429226048136571,1.11585728720936,1.5452198671947,3.60299883542404,2.32991899054908,10.0842473353246,9.31299199707181,11.0541811920863,17.224809265081,1.18542664892098,3.18091875923721,3.40508515278939,2.41129722697529,2.75078873194468,1.66176135211674,0.2249738915515,0,8.32268926214938,11.7402140659743,8.03818214451821,5.5601863423098,8.44802692155252,0.537862017998534,5.18171032762502,0,1.32418394073086,0.25426853765475,3.80099721227599,3.45688596480507,6.20515984207877,2.39460383124975,1.64185041498678,0.511164065356265,2.26624183040251,1.61207457045891,1.32506888912221,12.5404467670704,10.9753059446433,3.93499727133958,21.8492656918168,4.0579216775724,1.41483874589699,1.24271716604159,6.45015828355536,0,0,5.10673006216145,13.0564272808674,23.0634702500884,11.6411319170115,9.83617892129413,3.76929831000562,6.2024772597689,5.36915565568638,5.50840095108599,12.0415931094915,8.76339507141133,19.0635957030047,0.830091809617385,7.87376570161272,1.97143852804142,1.99825733481477,15.9980757394757,0,0,1.34329322598187,0.934853239388898,0.554805861502613,0.189403005275089,0.251567901752575,0,0.686520205190771,3.17584939902802,1.70980920641059,2.51353754982378,2.70804504178294,4.49803112163605,2.01841843939137,3.7323558705677,1.59505028734797,5.21745061811734,7.81339566785536,4.95046775819434,2.44122439922797,15.4571360322176,4.51124339578452,0,3.98095888698616,0,0.343395705182793,0.336749488765919,0,0.192619830407303,7.5054556981224,4.95889154733902,1.13352962756136,0.926089897295336,0.734210113519403,2.32815493405934,0.308801447160972,0.219284049578707,0.706756583783524,0.964570191354574,1.35153952522458,1.28120759293973,3.10887307558079,1.51929978088691,4.28601152070365,0,0,0,9.17307576769955,9.33937053264133,29.1610730234905,0.19998739585493,0.426766918776564,2.41100971525142,0,0.368211900503681,6.99397538597222,11.1973906805935,0.895260599125562,0.862598491173454,0.943595651135378,4.04075661310451,0,0,0.743614585554013,0,0.954013051960256,0.552032215008773,4.00285374142735,1.05802783107205,2.1437183414724,7.19367321080347,2.8339315265117,6.06608664417175,10.050701847797,5.04143392443436,10.0278016073116,5.16722066021924,24.2708014440562,11.1888399091169,1.29766695682514,0.733714394086716,2.88814165375846,0.381382095467167,2.0710797781803,0.994581110581374,1.5794168953344,2.21875575573872,8.59665412356402,2.3571602503328,1.96526301012116,6.94923605220113,9.38772426195686,4.68646859168308,5.58054350553197,12.6831620387814,2.7348740450911,0.548257766857182,2.97726707033577,0,13.9261046127159,8.0355275381743,3.02655349996942,0,0.91064876540519,3.81420191699347,0.230467975111559,7.20249639637158,16.7885240452774,9.99746158155306,2.12748913591143,16.6847102838104,3.9246546425257,3.45654297815204,5.60544326627578,1.82631744101899,1.07963795609311,0.9555033757741,1.92986669276972,0.632054446930906,0,2.26015753993353,4.81026818838152,27.3525336695209,20.8276542054619,3.45629830907046,1.72090943528111,0,0.0852134047591577,0.423387050190929,7.56052666195365,0.93061915699296,0.955538938977433,2.9082412267426,6.87051635306701,11.5822028733156,0.647428837187895,1.64260490969995,1.1598144313382,2.4285549652957,16.8436413692716,3.18321240258189,0.118920090777569,0.33883824611688,1.8689887846723,1.20770274853339,3.16414048242573,3.27839340755936,4.23285566725371,2.69663153929296,7.07029641304878,13.7415926980462,14.5552736160272,11.8343603723352,0.679708458751268,6.20293858667034,5.41446258978048,0.0999411559249289,4.82095634235275,3.52894871715692,17.8135834049954,10.2247094354512,1.37618785021362,14.1906187319937,1.26217249754548,8.15897882290976,3.9271562130634,2.1161073620616,1.11598505450025,0,0.432626562123789,10.9764789606519,2.513108155165,2.66066852124018,6.1193297845189,0.801652215796681,2.20547758883628,0,1.36401656792831,0.267964130156178,6.63335551567024,7.55060869791835,2.13233981900981,1.66645102024618,2.45437857376823,4.46937942930177,3.25182401483779,0.827413057616144,0.606351566874658,5.660635445321,3.42233301085281,6.4657970894004,8.39149803094313,5.98788641782824,8.9543595472072,1.28072815053259,0,14.2822071349473,0,1.833621662743,4.06896178315738,3.32878387092756,2.81783311027437,0 | |||
|short_description=p3@TNFRSF21 | |||
}} |
Latest revision as of 03:54, 19 September 2015
Short description: | p3@TNFRSF21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TNFRSF21_5end |
Coexpression cluster: | C4609_Esophageal_Urothelial_Mesothelial_bile_epidermoid_Mesenchymal_gastric |
Association with transcript: | 9bp_to_ENST00000296861_5end |
EntrezGene: | TNFRSF21 |
HGNC: | 13469 |
UniProt: | O75509 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.36e-13 | 253 |
endodermal cell | 2.40e-09 | 58 |
endo-epithelial cell | 1.05e-08 | 42 |