FFCP PHASE1:Mm9::chr10:105933922..105933926,+: Difference between revisions
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|id=chr10:105933922..105933926,+
|short_description=p@chr10:105933922..105933926,+
|description=CAGE_peak_at_chr10:105933922..105933926,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=408 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:105933922..105933926,+ | |||
|description=CAGE_peak_at_chr10:105933922..105933926,+ | |||
|id=chr10:105933922..105933926,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.88e-19!71;UBERON:0003075!6.88e-19!71;UBERON:0007284!6.88e-19!71;UBERON:0000033!3.51e-17!63;UBERON:0003056!4.87e-16!49;UBERON:0001049!1.94e-15!52;UBERON:0005068!1.94e-15!52;UBERON:0006241!1.94e-15!52;UBERON:0007135!1.94e-15!52;UBERON:0000955!6.13e-14!50;UBERON:0006238!6.13e-14!50;UBERON:0002616!3.00e-13!49;UBERON:0004121!4.01e-13!102;UBERON:0000924!4.01e-13!102;UBERON:0006601!4.01e-13!102;UBERON:0001017!4.35e-13!73;UBERON:0005743!4.35e-13!73;UBERON:0000073!2.05e-12!75;UBERON:0001016!2.05e-12!75;UBERON:0003080!2.60e-12!40;UBERON:0002780!1.03e-11!39;UBERON:0001890!1.03e-11!39;UBERON:0006240!1.03e-11!39;UBERON:0002020!4.81e-11!34;UBERON:0002791!2.72e-09!29;UBERON:0003528!2.72e-09!29;UBERON:0001893!2.72e-09!29;UBERON:0007811!2.47e-08!86;UBERON:0002021!3.08e-08!10;UBERON:0000411!3.08e-08!10;UBERON:0001950!3.08e-08!10;UBERON:0000956!4.37e-08!21;UBERON:0001869!4.37e-08!21;UBERON:0000203!4.37e-08!21;UBERON:0002619!3.08e-07!17;UBERON:0000153!6.99e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.15e-20,64;UBERON:0003075,6.15e-20,64;UBERON:0007284,6.15e-20,64;UBERON:0003056,1.86e-17,49;UBERON:0000073,4.09e-17,54;UBERON:0000955,5.42e-17,47;UBERON:0006238,5.42e-17,47;UBERON:0001049,6.05e-17,52;UBERON:0005068,6.05e-17,52;UBERON:0006241,6.05e-17,52;UBERON:0007135,6.05e-17,52;UBERON:0010371,3.77e-16,73;UBERON:0002616,7.90e-16,46;UBERON:0002021,1.18e-14,10;UBERON:0000411,1.18e-14,10;UBERON:0001950,1.18e-14,10;UBERON:0003080,2.51e-14,40;UBERON:0002780,2.48e-13,39;UBERON:0001890,2.48e-13,39;UBERON:0006240,2.48e-13,39;UBERON:0001017,2.89e-13,73;UBERON:0001016,1.18e-12,75;UBERON:0004121,1.20e-12,95;UBERON:0000924,1.20e-12,95;UBERON:0006601,1.20e-12,95;UBERON:0010314,2.03e-11,92;UBERON:0002020,2.31e-11,34;UBERON:0003528,3.32e-11,29;UBERON:0002791,3.32e-11,29;UBERON:0001893,3.32e-11,29;UBERON:0002619,3.59e-11,17;UBERON:0000956,5.68e-10,21;UBERON:0001869,5.68e-10,21;UBERON:0000203,5.68e-10,21 | |||
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| ||
|short_description=p@chr10:105933922..105933926,+ | |||
}} | }} |
Latest revision as of 19:57, 3 August 2015
Short description: | p@chr10:105933922..105933926, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:105933922..105933926, + |
Coexpression cluster: | MCL_coexpression_mm9:408 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 6.15e-20 | 64 |
neural plate | 6.15e-20 | 64 |
presumptive neural plate | 6.15e-20 | 64 |
pre-chordal neural plate | 1.86e-17 | 49 |
regional part of nervous system | 4.09e-17 | 54 |
brain | 5.42e-17 | 47 |
future brain | 5.42e-17 | 47 |
neural tube | 6.05e-17 | 52 |
neural rod | 6.05e-17 | 52 |
future spinal cord | 6.05e-17 | 52 |
neural keel | 6.05e-17 | 52 |
ecto-epithelium | 3.77e-16 | 73 |
regional part of brain | 7.90e-16 | 46 |
occipital lobe | 1.18e-14 | 10 |
visual cortex | 1.18e-14 | 10 |
neocortex | 1.18e-14 | 10 |
anterior neural tube | 2.51e-14 | 40 |
regional part of forebrain | 2.48e-13 | 39 |
forebrain | 2.48e-13 | 39 |
future forebrain | 2.48e-13 | 39 |
central nervous system | 2.89e-13 | 73 |
nervous system | 1.18e-12 | 75 |
ectoderm-derived structure | 1.20e-12 | 95 |
ectoderm | 1.20e-12 | 95 |
presumptive ectoderm | 1.20e-12 | 95 |
structure with developmental contribution from neural crest | 2.03e-11 | 92 |
gray matter | 2.31e-11 | 34 |
brain grey matter | 3.32e-11 | 29 |
regional part of telencephalon | 3.32e-11 | 29 |
telencephalon | 3.32e-11 | 29 |
regional part of cerebral cortex | 3.59e-11 | 17 |
cerebral cortex | 5.68e-10 | 21 |
cerebral hemisphere | 5.68e-10 | 21 |
pallium | 5.68e-10 | 21 |