FFCP PHASE1:Mm9::chr1:84692708..84692713,-: Difference between revisions
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{{FFCP|EntrezGene=227325|HGNC=|MCL_coexpression_id=30|UniProt=Q8JZM4|association_with_transcript=82bp_to_ENSMUST00000049126,NM_152915,uc007bsw.1,uc007bsx.1_5end|description=CAGE_peak_15_at_Dner_5end|id=chr1:84692708..84692713,-|ontology_enrichment_celltype=CL:0000117!9.32e-26!23;CL:0000337!9.32e-26!23;CL:0000540!8.73e-17!33;CL:0000047!8.73e-17!33;CL:0000031!8.73e-17!33;CL:0000404!8.73e-17!33;CL:0000393!1.28e-13!39;CL:0000211!1.28e-13!39;CL:0002319!5.31e-12!43;CL:0000221!1.21e-11!44;CL:0000133!1.21e-11!44;CL:0000055!8.40e-10!50;CL:0000120!6.11e-09!3;CL:0002614!9.23e-09!3;CL:0002612!9.79e-09!3|ontology_enrichment_celltype_v019_2=CL:0000120,7.15e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003076!1.01e-20!12;UBERON:0003057!1.01e-20!12;UBERON:0001017!1.21e-16!73;UBERON:0005743!1.21e-16!73;UBERON:0000073!4.80e-16!75;UBERON:0001016!4.80e-16!75;UBERON:0002240!1.69e-15!6;UBERON:0005174!1.69e-15!6;UBERON:0001137!1.69e-15!6;UBERON:0001049!2.71e-15!52;UBERON:0005068!2.71e-15!52;UBERON:0006241!2.71e-15!52;UBERON:0007135!2.71e-15!52;UBERON:0002298!3.77e-15!6;UBERON:0002346!1.03e-13!71;UBERON:0003075!1.03e-13!71;UBERON:0007284!1.03e-13!71;UBERON:0004121!1.35e-13!102;UBERON:0000924!1.35e-13!102;UBERON:0006601!1.35e-13!102;UBERON:0001948!2.67e-13!5;UBERON:0002315!2.67e-13!5;UBERON:0002950!1.32e-10!4;UBERON:0001891!1.32e-10!4;UBERON:0009616!1.32e-10!4;UBERON:0002020!4.86e-10!34;UBERON:0002616!1.27e-09!49;UBERON:0000955!2.32e-09!50;UBERON:0006238!2.32e-09!50;UBERON:0002038!9.23e-09!3;UBERON:0002308!9.23e-09!3;UBERON:0009663!9.23e-09!3;UBERON:0009661!9.23e-09!3;UBERON:0006331!9.23e-09!3;UBERON:0000125!9.23e-09!3;UBERON:0000033!9.29e-09!63;UBERON:0002257!9.79e-09!3;UBERON:0002420!3.58e-08!8;UBERON:0007245!3.58e-08!8;UBERON:0010009!3.58e-08!8;UBERON:0010011!3.58e-08!8;UBERON:0000454!3.58e-08!8;UBERON:0004733!1.57e-07!6;UBERON:0004732!1.57e-07!6;UBERON:0002028!1.57e-07!6;UBERON:0007277!1.57e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.63e-30,4;UBERON:0002680,5.63e-30,4;UBERON:0001895,5.63e-30,4;UBERON:0010092,5.63e-30,4;UBERON:0006215,5.63e-30,4;UBERON:0004733,1.98e-20,6;UBERON:0004732,1.98e-20,6;UBERON:0002028,1.98e-20,6;UBERON:0007277,1.98e-20,6;UBERON:0003076,8.07e-11,12;UBERON:0003057,8.07e-11,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.220868540951614,0.122490799214954,0,0,0,0.383062014255563,0.153606533256243,0.395658863190582,0.457438218012048,0,0.558365998002762,0.56276261003168,0.763991238884051,0.883885756421003,0.284743361598206,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,4.09893115816166,3.77004072264219,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0,0,0,0|short_description=p15@Dner}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227325 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=Q8JZM4 | |||
|association_with_transcript=82bp_to_ENSMUST00000049126,NM_152915,uc007bsw.1,uc007bsx.1_5end | |||
|cluster_id=chr1:84692708..84692713,- | |||
|description=CAGE_peak_15_at_Dner_5end | |||
|id=chr1:84692708..84692713,- | |||
|ontology_enrichment_celltype=CL:0000117!9.32e-26!23;CL:0000337!9.32e-26!23;CL:0000540!8.73e-17!33;CL:0000047!8.73e-17!33;CL:0000031!8.73e-17!33;CL:0000404!8.73e-17!33;CL:0000393!1.28e-13!39;CL:0000211!1.28e-13!39;CL:0002319!5.31e-12!43;CL:0000221!1.21e-11!44;CL:0000133!1.21e-11!44;CL:0000055!8.40e-10!50;CL:0000120!6.11e-09!3;CL:0002614!9.23e-09!3;CL:0002612!9.79e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,7.15e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!1.01e-20!12;UBERON:0003057!1.01e-20!12;UBERON:0001017!1.21e-16!73;UBERON:0005743!1.21e-16!73;UBERON:0000073!4.80e-16!75;UBERON:0001016!4.80e-16!75;UBERON:0002240!1.69e-15!6;UBERON:0005174!1.69e-15!6;UBERON:0001137!1.69e-15!6;UBERON:0001049!2.71e-15!52;UBERON:0005068!2.71e-15!52;UBERON:0006241!2.71e-15!52;UBERON:0007135!2.71e-15!52;UBERON:0002298!3.77e-15!6;UBERON:0002346!1.03e-13!71;UBERON:0003075!1.03e-13!71;UBERON:0007284!1.03e-13!71;UBERON:0004121!1.35e-13!102;UBERON:0000924!1.35e-13!102;UBERON:0006601!1.35e-13!102;UBERON:0001948!2.67e-13!5;UBERON:0002315!2.67e-13!5;UBERON:0002950!1.32e-10!4;UBERON:0001891!1.32e-10!4;UBERON:0009616!1.32e-10!4;UBERON:0002020!4.86e-10!34;UBERON:0002616!1.27e-09!49;UBERON:0000955!2.32e-09!50;UBERON:0006238!2.32e-09!50;UBERON:0002038!9.23e-09!3;UBERON:0002308!9.23e-09!3;UBERON:0009663!9.23e-09!3;UBERON:0009661!9.23e-09!3;UBERON:0006331!9.23e-09!3;UBERON:0000125!9.23e-09!3;UBERON:0000033!9.29e-09!63;UBERON:0002257!9.79e-09!3;UBERON:0002420!3.58e-08!8;UBERON:0007245!3.58e-08!8;UBERON:0010009!3.58e-08!8;UBERON:0010011!3.58e-08!8;UBERON:0000454!3.58e-08!8;UBERON:0004733!1.57e-07!6;UBERON:0004732!1.57e-07!6;UBERON:0002028!1.57e-07!6;UBERON:0007277!1.57e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.63e-30,4;UBERON:0002680,5.63e-30,4;UBERON:0001895,5.63e-30,4;UBERON:0010092,5.63e-30,4;UBERON:0006215,5.63e-30,4;UBERON:0004733,1.98e-20,6;UBERON:0004732,1.98e-20,6;UBERON:0002028,1.98e-20,6;UBERON:0007277,1.98e-20,6;UBERON:0003076,8.07e-11,12;UBERON:0003057,8.07e-11,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.220868540951614,0.122490799214954,0,0,0,0.383062014255563,0.153606533256243,0.395658863190582,0.457438218012048,0,0.558365998002762,0.56276261003168,0.763991238884051,0.883885756421003,0.284743361598206,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,4.09893115816166,3.77004072264219,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p15@Dner | |||
}} |
Latest revision as of 16:52, 1 October 2015
Short description: | p15@Dner |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Dner_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 82bp_to_ENSMUST00000049126, NM_152915, uc007bsw.1, uc007bsx.1_5end |
EntrezGene: | Dner |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 7.15e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.63e-30 | 4 |
regional part of metencephalon | 5.63e-30 | 4 |
metencephalon | 5.63e-30 | 4 |
future metencephalon | 5.63e-30 | 4 |
rhombic lip | 5.63e-30 | 4 |
segmental subdivision of hindbrain | 1.98e-20 | 6 |
segmental subdivision of nervous system | 1.98e-20 | 6 |
hindbrain | 1.98e-20 | 6 |
presumptive hindbrain | 1.98e-20 | 6 |
posterior neural tube | 8.07e-11 | 12 |
chordal neural plate | 8.07e-11 | 12 |