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FFCP PHASE1:Mm9::chr1:74379170..74379215,+: Difference between revisions

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{{FFCP|EntrezGene=56695|HGNC=|UniProt=Q69ZP3|association_with_transcript=0bp_to_ENSMUST00000087225,NM_019999,uc007blw.1_5end|description=CAGE_peak_2_at_Pnkd_5end|id=chr1:74379170..74379215,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!3.76e-15!50;UBERON:0006238!3.76e-15!50;UBERON:0004111!4.81e-15!122;UBERON:0001049!5.59e-15!52;UBERON:0005068!5.59e-15!52;UBERON:0006241!5.59e-15!52;UBERON:0007135!5.59e-15!52;UBERON:0002616!1.18e-14!49;UBERON:0000025!2.03e-14!114;UBERON:0001017!8.06e-14!73;UBERON:0005743!8.06e-14!73;UBERON:0000033!1.70e-13!63;UBERON:0000073!5.54e-13!75;UBERON:0001016!5.54e-13!75;UBERON:0003080!1.11e-11!40;UBERON:0002780!4.08e-11!39;UBERON:0001890!4.08e-11!39;UBERON:0006240!4.08e-11!39;UBERON:0002346!4.11e-11!71;UBERON:0003075!4.11e-11!71;UBERON:0007284!4.11e-11!71;UBERON:0003056!1.28e-10!49;UBERON:0004121!1.50e-10!102;UBERON:0000924!1.50e-10!102;UBERON:0006601!1.50e-10!102;UBERON:0002020!2.95e-10!34;UBERON:0002791!3.17e-09!29;UBERON:0003528!3.17e-09!29;UBERON:0001893!3.17e-09!29;UBERON:0000468!2.29e-08!333;UBERON:0000922!3.87e-07!328;UBERON:0003135!9.01e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.08e-16,54;UBERON:0001049,4.96e-15,52;UBERON:0005068,4.96e-15,52;UBERON:0006241,4.96e-15,52;UBERON:0007135,4.96e-15,52;UBERON:0004111,5.39e-15,122;UBERON:0000025,2.29e-14,114;UBERON:0001017,7.23e-14,73;UBERON:0000955,7.90e-14,47;UBERON:0006238,7.90e-14,47;UBERON:0010371,2.16e-13,73;UBERON:0002616,2.42e-13,46;UBERON:0002346,3.18e-13,64;UBERON:0003075,3.18e-13,64;UBERON:0007284,3.18e-13,64;UBERON:0001016,5.00e-13,75;UBERON:0004121,5.33e-12,95;UBERON:0000924,5.33e-12,95;UBERON:0006601,5.33e-12,95;UBERON:0003080,1.01e-11,40;UBERON:0002780,3.75e-11,39;UBERON:0001890,3.75e-11,39;UBERON:0006240,3.75e-11,39;UBERON:0010314,5.63e-11,92;UBERON:0003056,1.18e-10,49;UBERON:0002020,2.73e-10,34;UBERON:0003528,2.97e-09,29;UBERON:0002791,2.97e-09,29;UBERON:0001893,2.97e-09,29;UBERON:0003135,8.60e-07,15|phase1_expression=3.84357233051505,0.348975407639361,0.909998478779072,2.11724947914781,0.500895729946347,1.6787927191189,0.233612640595526,0.774739940649458,0.140788722151667,0,1.02730780935303,1.19658238493005,0.342401459862411,0.611942816932982,0,0,0.699561878128147,0,0.274228867211478,0.42438965179803,7.82398269389842,1.58865521921416,2.08959831311148,0.319984845586813,1.37645568640302,0.57423196411502,0.86152399231815,1.07735616342945,0.760093677825496,0.756090389279792,0,5.08024538767705,1.23012957516914,0,0.866554859253824,2.1610503896604,1.02084678131185,0,0,0,0,0,0,5.16176953699867,3.75094645512204,3.30384153891027,3.12956537739216,4.36050312760893,1.31811709640683,2.13872888981712,1.95980990275508,4.31257693094915,0.167782606057736,0,0.672187598284928,0.514518872071894,1.43266719969378,2.57836046138721,7.28339259094552,3.70293685490423,7.60597684207415,2.03306719241479,1.77858959222228,1.3498495759221,2.96659908770092,2.8419204597844,3.29560121570245,3.84218305321555,4.14758449233911,5.13022565660425,7.57169860864975,7.9982275633065,5.96345060569357,4.5321595709533,5.46319184803947,7.35375029288017,9.91042928994498,10.5980490610706,9.83081812839958,7.91317726381163,6.67859798297591,7.8137005583514,10.6089539620525,11.2552522006336,11.4598685832608,3.83017161115768,5.83723891276322,11.9295645328192,1.66597625333005,2.19157524309678,5.50742528533188,11.185510400758,4.75979933595425,30.7630819233556,46.1341256387845,25.9855594516455,9.26933172869562,0,0.519572009205738,0.70667914902068,5.63373679106722,0,0,0,0.432982082022428,0.506719730950197,1.01104889002957,9.36307813696292,4.66088190564909,2.67195850316685,2.60227990149204,2.74018930480927,2.30615497256059,2.41156224884196,2.3517741427141,3.89566433121994,0.741584903203122,8.38676270135488,0.884610551949874,2.75003644910596,1.54589062922275,2.42437626567611,5.59175283654366,20.7874365878198,14.6612694769419,2.04365644166873,0.599075622529601,0,0.254140454146129,15.1288545798871,19.2150253183823,7.03664371832041,14.4274185759589,11.2514801225345,12.0517065844545,8.27430441645564,3.36069900706044,3.73220911830279,16.6797020566225,22.3068367239662,5.72529949035896,3.21862946206862,3.42118046630164,2.41127708537144,2.4493139694478,1.66547836370305,2.62364828767241,14.4873887613849,5.6047678162539,4.9167580843633,5.80638709741031,3.28793598641362,4.17070873838397,5.2237824978325,5.14455341019859,6.96619933864726,0,0.772043721344145,0.284163499395593,4.34964122324554,3.28336483973535,4.68161359798639,5.44512891845984,3.73852040320067,3.85667782218446,4.41814495025775,3.75582761959467,3.73649095574942,5.43047504714485,5.41752631461014,8.99863785958999,6.43279944671462,3.73235195994786,7.38135303182045,28.5994330047213,10.496270462687,0.991256348951394,1.58670339998127,5.97207101498655,3.0190767341857,7.47431275668141,5.44545516483025,6.0042071838115,3.61428689613862,2.37264530772256,1.15289268306808,1.50801125280162,1.98956472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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56695
|HGNC=
|TSSclassifier=NA
|UniProt=Q69ZP3
|association_with_transcript=0bp_to_ENSMUST00000087225,NM_019999,uc007blw.1_5end
|cluster_id=chr1:74379170..74379215,+
|description=CAGE_peak_2_at_Pnkd_5end
|id=chr1:74379170..74379215,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!3.76e-15!50;UBERON:0006238!3.76e-15!50;UBERON:0004111!4.81e-15!122;UBERON:0001049!5.59e-15!52;UBERON:0005068!5.59e-15!52;UBERON:0006241!5.59e-15!52;UBERON:0007135!5.59e-15!52;UBERON:0002616!1.18e-14!49;UBERON:0000025!2.03e-14!114;UBERON:0001017!8.06e-14!73;UBERON:0005743!8.06e-14!73;UBERON:0000033!1.70e-13!63;UBERON:0000073!5.54e-13!75;UBERON:0001016!5.54e-13!75;UBERON:0003080!1.11e-11!40;UBERON:0002780!4.08e-11!39;UBERON:0001890!4.08e-11!39;UBERON:0006240!4.08e-11!39;UBERON:0002346!4.11e-11!71;UBERON:0003075!4.11e-11!71;UBERON:0007284!4.11e-11!71;UBERON:0003056!1.28e-10!49;UBERON:0004121!1.50e-10!102;UBERON:0000924!1.50e-10!102;UBERON:0006601!1.50e-10!102;UBERON:0002020!2.95e-10!34;UBERON:0002791!3.17e-09!29;UBERON:0003528!3.17e-09!29;UBERON:0001893!3.17e-09!29;UBERON:0000468!2.29e-08!333;UBERON:0000922!3.87e-07!328;UBERON:0003135!9.01e-07!15
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.08e-16,54;UBERON:0001049,4.96e-15,52;UBERON:0005068,4.96e-15,52;UBERON:0006241,4.96e-15,52;UBERON:0007135,4.96e-15,52;UBERON:0004111,5.39e-15,122;UBERON:0000025,2.29e-14,114;UBERON:0001017,7.23e-14,73;UBERON:0000955,7.90e-14,47;UBERON:0006238,7.90e-14,47;UBERON:0010371,2.16e-13,73;UBERON:0002616,2.42e-13,46;UBERON:0002346,3.18e-13,64;UBERON:0003075,3.18e-13,64;UBERON:0007284,3.18e-13,64;UBERON:0001016,5.00e-13,75;UBERON:0004121,5.33e-12,95;UBERON:0000924,5.33e-12,95;UBERON:0006601,5.33e-12,95;UBERON:0003080,1.01e-11,40;UBERON:0002780,3.75e-11,39;UBERON:0001890,3.75e-11,39;UBERON:0006240,3.75e-11,39;UBERON:0010314,5.63e-11,92;UBERON:0003056,1.18e-10,49;UBERON:0002020,2.73e-10,34;UBERON:0003528,2.97e-09,29;UBERON:0002791,2.97e-09,29;UBERON:0001893,2.97e-09,29;UBERON:0003135,8.60e-07,15
|phase1_expression=3.84357233051505,0.348975407639361,0.909998478779072,2.11724947914781,0.500895729946347,1.6787927191189,0.233612640595526,0.774739940649458,0.140788722151667,0,1.02730780935303,1.19658238493005,0.342401459862411,0.611942816932982,0,0,0.699561878128147,0,0.274228867211478,0.42438965179803,7.82398269389842,1.58865521921416,2.08959831311148,0.319984845586813,1.37645568640302,0.57423196411502,0.86152399231815,1.07735616342945,0.760093677825496,0.756090389279792,0,5.08024538767705,1.23012957516914,0,0.866554859253824,2.1610503896604,1.02084678131185,0,0,0,0,0,0,5.16176953699867,3.75094645512204,3.30384153891027,3.12956537739216,4.36050312760893,1.31811709640683,2.13872888981712,1.95980990275508,4.31257693094915,0.167782606057736,0,0.672187598284928,0.514518872071894,1.43266719969378,2.57836046138721,7.28339259094552,3.70293685490423,7.60597684207415,2.03306719241479,1.77858959222228,1.3498495759221,2.96659908770092,2.8419204597844,3.29560121570245,3.84218305321555,4.14758449233911,5.13022565660425,7.57169860864975,7.9982275633065,5.96345060569357,4.5321595709533,5.46319184803947,7.35375029288017,9.91042928994498,10.5980490610706,9.83081812839958,7.91317726381163,6.67859798297591,7.8137005583514,10.6089539620525,11.2552522006336,11.4598685832608,3.83017161115768,5.83723891276322,11.9295645328192,1.66597625333005,2.19157524309678,5.50742528533188,11.185510400758,4.75979933595425,30.7630819233556,46.1341256387845,25.9855594516455,9.26933172869562,0,0.519572009205738,0.70667914902068,5.63373679106722,0,0,0,0.432982082022428,0.506719730950197,1.01104889002957,9.36307813696292,4.66088190564909,2.67195850316685,2.60227990149204,2.74018930480927,2.30615497256059,2.41156224884196,2.3517741427141,3.89566433121994,0.741584903203122,8.38676270135488,0.884610551949874,2.75003644910596,1.54589062922275,2.42437626567611,5.59175283654366,20.7874365878198,14.6612694769419,2.04365644166873,0.599075622529601,0,0.254140454146129,15.1288545798871,19.2150253183823,7.03664371832041,14.4274185759589,11.2514801225345,12.0517065844545,8.27430441645564,3.36069900706044,3.73220911830279,16.6797020566225,22.3068367239662,5.72529949035896,3.21862946206862,3.42118046630164,2.41127708537144,2.4493139694478,1.66547836370305,2.62364828767241,14.4873887613849,5.6047678162539,4.9167580843633,5.80638709741031,3.28793598641362,4.17070873838397,5.2237824978325,5.14455341019859,6.96619933864726,0,0.772043721344145,0.284163499395593,4.34964122324554,3.28336483973535,4.68161359798639,5.44512891845984,3.73852040320067,3.85667782218446,4.41814495025775,3.75582761959467,3.73649095574942,5.43047504714485,5.41752631461014,8.99863785958999,6.43279944671462,3.73235195994786,7.38135303182045,28.5994330047213,10.496270462687,0.991256348951394,1.58670339998127,5.97207101498655,3.0190767341857,7.47431275668141,5.44545516483025,6.0042071838115,3.61428689613862,2.37264530772256,1.15289268306808,1.50801125280162,1.98956472041151,0.779856348476481,4.49409704327111,2.37751854862164,2.98711909881551,3.79335801906163,4.91268604221834,14.6520056375005,5.29493452397817,5.62462212786115,3.57692681440625,4.86921335856781,6.4948465111025,7.06494275286187,7.89741849099523,14.2297261001831,1.50160595144485,1.17935397067922,2.24862112384854,1.21716072833102,0.964708639009667,1.01850340712568,2.01387296215567,0.324270453550071,3.56929837144506,7.18841032636773,6.32639611036456,10.9213185590096,34.6033062787543,34.0855085691633,29.9114983245288,2.77129785249907,3.41084541186873,4.88894929326078,3.22515662972857,3.28566347603903,4.18765643604539,5.47500374037832,3.12213836572478,3.31033802623001,1.7717175171902,2.87018583583477,3.60499292374624,3.62638461918381,2.02508682014116,4.52373851817817,2.71952841909355,1.47529281905711,3.31124095565679,8.66973185934077,9.61135830056066,1.3114795630134,3.28212205365685,3.15508219416257,2.73307121007647,3.66219776145758,3.34556317133573,2.45078541490634,3.67999490025482,2.42886421004937,3.79932615284705,1.97643888973262,10.9249247583414,7.2389443456217,5.34196811001766,4.39794790254655,6.76377504187395,2.65490276679926,3.64170954232472,6.65111825322452,6.22396763194464,10.335566250827,7.99331384654211,3.10113951801865,3.99887102425256,3.92147116223193,2.84433082142234,5.27093042874994,4.12542172992747,12.5962654128902,2.88097750450096,4.52755393239641,5.35842587578981,5.32020700926821,7.13475270408282,7.89835298890181,6.08929898229199,0.704015124191131,1.0591603543191,3.96951116498931,8.244312647074,3.87514624070173,4.22190474497091,5.13301079213487,6.56563598980245,1.45740418314925,12.7943458387252,1.02522528478712,2.68302928352189,0.740778109478847,0,0.683471138605126,0.457556346413045,1.01987057996313,1.11961161858926,0.829199842826543,15.2747298882418,9.96458379780576,6.91286188231286,4.32021363287205,6.06356058441959,3.27543845619266,5.39457385539283,7.19085064810423,8.11443420150492,0.648074866458964,3.10669656543463,9.01908701894705,13.3069725979141,10.092967917883,8.36140109879405,7.23295011475294,7.7719817725758,8.44972118249428,12.7600297147071,20.0281347853108,19.5683137869065,14.1134703066354,1.26404448251271,0.608175645870493,1.23253148597793,2.33857481360031,1.43221356533985,1.19208812868759,1.32214994471966,1.62458479892035,1.11063094942962,1.5241361331,1.31074040677893,1.07203668813728,1.44317762460494,1.28564592399726,2.72076460338254,1.33191572024439,1.52513556236109,2.01461539636894,8.113962949352,1.31377732815827,3.29672923681077,3.00115730710692,17.0534515372024,12.9892923801925,14.2700823317225,9.73922372846974,10.4830441229649,10.9613203163303,7.55393897389701,12.8254275044043,13.9599572999508,4.98456649882625,10.3552062350364,0.93408612825759,6.78342284781753,2.90247129782028,3.40349403895612,2.51535795153579,1.47074806760011,5.778414922842,3.29656091582231,3.85103051510178,5.55933865880354,5.32306529769503,2.82939512079114,5.52484894072306,5.18603734479441,4.70970845436029,2.38146845641537,3.82418275618023,6.17309505483856,2.88460130562315,3.23837624295674,2.74295401908332,5.32427418478012,3.57654284920981,3.63366041580821,3.57615645578256,3.80765735512544,3.84148743032822,3.6829759601298,3.80251518768413,5.05028044491965,3.79632057997357,4.53120618927592,3.6830793885272,3.09873682371932,5.40138510747196,8.24374907195222,3.97683734357194,2.79332370262788,2.86932498103265,3.30887128679273,3.94175320554716
|short_description=p2@Pnkd
}}

Latest revision as of 14:28, 1 October 2015

Short description:p2@Pnkd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pnkd_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000087225, NM_019999, uc007blw.1_5end
EntrezGene:Pnkd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pnkd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.16
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.75
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C37.28
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.91
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.93
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F92.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C830.76
Mouse hepatocyte, donor6.CNhs13090.11822-124F446.13
Mouse hepatocyte, donor8.CNhs13091.11824-124F625.99
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.36
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I33.90
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H18.39
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B220.79
cerebellum, neonate N30.CNhs11135.1395-42I214.66
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A415.13
corpus striatum, adult.CNhs10487.19-21D819.22
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D514.43
cortex, neonate N30.CNhs11107.1392-42F211.25
diencephalon, adult.CNhs10482.20-12F212.05
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.36
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.73
epididymis, adult.CNhs10490.58-23B216.68
eyeball, adult.CNhs10484.31-12G422.31
eyeball, embryo E12.CNhs11016.345-16C65.73
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A214.49
forelimb, embryo E11.CNhs10596.335-25E25.60
forelimb, embryo E12.CNhs10600.359-14H24.92
forelimb, embryo E13.CNhs10589.384-1E25.81
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I94.68
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E33.74
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G15.42
heart, neonate N16.CNhs11209.782-15G19.00
heart, neonate N20.CNhs11127.821-26I66.43
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D27.38
hippocampus, adult.CNhs10478.13-16E828.60
hippocampus, neonate N00.CNhs11228.627-43G110.50
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I55.97
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D87.47
intestine, embryo E16.CNhs10585.463-22H45.45
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F84.91
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C75.62
kidney, neonate N00.CNhs11214.646-21G73.58
kidney, neonate N10.CNhs11206.758-6D54.87
kidney, neonate N20.CNhs11113.832-19I16.49
kidney, neonate N25.CNhs11122.1353-25F37.06
kidney, neonate N30.CNhs11203.1385-42H17.90
liver, adult pregnant day01.CNhs10466.508-5B214.23
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B910.92
liver, neonate N20.CNhs11220.823-25A334.60
liver, neonate N25.CNhs11198.1368-26H134.09
liver, neonate N30.CNhs11106.1382-42D129.91
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C28.67
medulla oblongata, neonate N30.CNhs11200.1396-42A39.61
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I77.24
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G66.76
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E56.22
pancreas, embryo E17.CNhs10599.1558-45G310.34
pancreas, embryo E18.CNhs10580.1535-43I77.99
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G812.60
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C74.53
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F67.13
pituitary gland, embryo E17.CNhs11039.1265-44F57.90
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C38.24
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H34.22
skin, neonate N06.CNhs11097.693-20I55.13
skin, neonate N10.CNhs11108.762-6C46.57
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C912.79
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E39.96
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D44.32
stomach, embryo E17.CNhs11006.1035-18D56.06
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B85.39
stomach, neonate N07.CNhs11210.718-18A97.19
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F513.31
testis, embryo E15.CNhs11034.443-27C510.09
testis, embryo E16.CNhs11033.470-26G58.36
testis, embryo E17.CNhs11029.486-18I57.23
testis, embryo E18.CNhs11027.503-18G57.77
testis, neonate N00.CNhs11189.1300-22B78.45
testis, neonate N07.CNhs11222.726-26I412.76
testis, neonate N10.CNhs11204.763-44D920.03
testis, neonate N20.CNhs11110.839-18H319.57
testis, neonate N30.CNhs11130.1391-42E214.11
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E48.11
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F817.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.08e-1654
neural tube4.96e-1552
neural rod4.96e-1552
future spinal cord4.96e-1552
neural keel4.96e-1552
anatomical conduit5.39e-15122
tube2.29e-14114
central nervous system7.23e-1473
brain7.90e-1447
future brain7.90e-1447
ecto-epithelium2.16e-1373
regional part of brain2.42e-1346
neurectoderm3.18e-1364
neural plate3.18e-1364
presumptive neural plate3.18e-1364
nervous system5.00e-1375
ectoderm-derived structure5.33e-1295
ectoderm5.33e-1295
presumptive ectoderm5.33e-1295
anterior neural tube1.01e-1140
regional part of forebrain3.75e-1139
forebrain3.75e-1139
future forebrain3.75e-1139
structure with developmental contribution from neural crest5.63e-1192
pre-chordal neural plate1.18e-1049
gray matter2.73e-1034
brain grey matter2.97e-0929
regional part of telencephalon2.97e-0929
telencephalon2.97e-0929
male reproductive organ8.60e-0715
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