FFCP PHASE1:Mm9::chr1:59820528..59820529,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:59820528..59820529,+|id=chr1:59820528..59820529,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!1.94e-07!14;UBERON:0000117!1.94e-07!14;UBERON:0000171!1.94e-07!14;UBERON:0000170!1.94e-07!14;UBERON:0005597!1.94e-07!14;UBERON:0000118!1.94e-07!14;UBERON:0005157!3.03e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.57e-10,3;UBERON:0000478,7.57e-10,3;UBERON:0000158,7.57e-10,3;UBERON:0000305,3.50e-08,1;UBERON:0002048,3.79e-08,14;UBERON:0000117,3.79e-08,14;UBERON:0000171,3.79e-08,14;UBERON:0000170,3.79e-08,14;UBERON:0005597,3.79e-08,14;UBERON:0000118,3.79e-08,14;UBERON:0002259,1.05e-07,1;UBERON:0002314,1.05e-07,1;UBERON:0004061,1.05e-07,1;UBERON:0006777,1.05e-07,1;UBERON:0005882,1.05e-07,1;UBERON:0005153,9.65e-07,17;UBERON:0005178,9.65e-07,17;UBERON:0005181,9.65e-07,17;UBERON:0002224,9.65e-07,17;UBERON:0000915,9.65e-07,17;UBERON:0008947,9.65e-07,17;UBERON:0003258,9.65e-07,17|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0.129123323441576,0.140788722151667,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0.388859798148567,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.630974884054146,0.285650984403804,0.662605622854841,0.122490799214954,0,0,0,0.255374676170375,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,1.17851434189467,0.142371680799103,0,0.151452386666368,0.0755715601067855,0.579728977403356,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0.14084341977668,0,5.09610479413291,0,0,0.253359865475099,0,0,0.517875767294343,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.452167921657868,0.705532242814229,0.251333182659351,1.23597483867187,0,0,0.647067399789637,0,0,0,1.46390398505774,0,0,0.11981512450592,0,0,1.04853447583376,0.457500602818626,0.628271760564322,0.347648640384553,0.767146371990992,0.20778804455956,0.324482526135515,0.305518091550949,0.497627882440372,0.758168275301024,0.210441855886474,0.650602214813519,0.229902104433473,0.540186389416048,0.30140963567143,0.476255494059295,0.12811372028485,0.374806898238915,0.517406741478031,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0,0.465067889500816,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0,0.268412837520744,0.841159794256509,0.617427674275707,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.189709611372772,0,0,0.370191491765402,0.592905254174298,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0.25462585178142,0,0.648540907100142,0,0,0.372140947668503,0.624075346229121,0.505157755894224,0,0.964887042726734,2.40179147216586,0.37898282354097,0.325929952884052,0.169745085775188,0.704070744865506,0.502518772325447,0.476087281772027,0.975668239288994,0.788175720530955,0.8858587585951,1.11618338060241,0.81931657357869,1.20879487306127,1.73578870297814,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0.780877488593277,0.646270193198397,0.477937595905104,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0,0.321321316421807,0.851640511249612,0.35613120733451,0.488660878060728,0.494910368917606,0,0.242780636154981,0,0,0.885905678642318,0,0,0.727067458955011,0.356497378384721,0,0,0,0,0.540183282093931,0,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,1.0591603543191,0.220528398054962,0.98931751764888,0.645857706783622,0.361877549568935,0.477489376012546,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0.509935289981566,0.139951452323658,0.414599921413271,0.954670618015114,0.316335993581135,0.203319467126849,0.216010681643603,0,0.218362563746178,0.134864346384821,0.495920734352016,0,0.129614973291793,0,0,0.747582730219894,0,0,0.387479470433193,0.506868376472335,0.234714477291508,0.39061315453185,0.419437377702843,0,0,0,0,0,0.129920822977795,0,0,0,0.295379054349154,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0.906921534460845,0.221985953374065,0.179427713218951,0.167884616364078,0.386379188064381,0.187682475451182,0.73260649706906,0.214368379079066,0,1.12950368523413,0.460325236507177,1.14579102687879,0.515559547031063,0,0,1.35004500046361,0.45032120322422,0,0.51776031175182,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0.64183841918363,0,0.50695859978048,0.188626341386076,0.187283014939765,0.512201219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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:59820528..59820529,+ | |||
|description=CAGE_peak_at_chr1:59820528..59820529,+ | |||
|id=chr1:59820528..59820529,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.94e-07!14;UBERON:0000117!1.94e-07!14;UBERON:0000171!1.94e-07!14;UBERON:0000170!1.94e-07!14;UBERON:0005597!1.94e-07!14;UBERON:0000118!1.94e-07!14;UBERON:0005157!3.03e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.57e-10,3;UBERON:0000478,7.57e-10,3;UBERON:0000158,7.57e-10,3;UBERON:0000305,3.50e-08,1;UBERON:0002048,3.79e-08,14;UBERON:0000117,3.79e-08,14;UBERON:0000171,3.79e-08,14;UBERON:0000170,3.79e-08,14;UBERON:0005597,3.79e-08,14;UBERON:0000118,3.79e-08,14;UBERON:0002259,1.05e-07,1;UBERON:0002314,1.05e-07,1;UBERON:0004061,1.05e-07,1;UBERON:0006777,1.05e-07,1;UBERON:0005882,1.05e-07,1;UBERON:0005153,9.65e-07,17;UBERON:0005178,9.65e-07,17;UBERON:0005181,9.65e-07,17;UBERON:0002224,9.65e-07,17;UBERON:0000915,9.65e-07,17;UBERON:0008947,9.65e-07,17;UBERON:0003258,9.65e-07,17 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0.129123323441576,0.140788722151667,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.251793635951155,0,0.183546752161682,0,0,0,0.388859798148567,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.630974884054146,0.285650984403804,0.662605622854841,0.122490799214954,0,0,0,0.255374676170375,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.558365998002762,0,0.15279824777681,1.17851434189467,0.142371680799103,0,0.151452386666368,0.0755715601067855,0.579728977403356,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0.14084341977668,0,5.09610479413291,0,0,0.253359865475099,0,0,0.517875767294343,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.452167921657868,0.705532242814229,0.251333182659351,1.23597483867187,0,0,0.647067399789637,0,0,0,1.46390398505774,0,0,0.11981512450592,0,0,1.04853447583376,0.457500602818626,0.628271760564322,0.347648640384553,0.767146371990992,0.20778804455956,0.324482526135515,0.305518091550949,0.497627882440372,0.758168275301024,0.210441855886474,0.650602214813519,0.229902104433473,0.540186389416048,0.30140963567143,0.476255494059295,0.12811372028485,0.374806898238915,0.517406741478031,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0,0.465067889500816,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0,0.268412837520744,0.841159794256509,0.617427674275707,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.189709611372772,0,0,0.370191491765402,0.592905254174298,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0.25462585178142,0,0.648540907100142,0,0,0.372140947668503,0.624075346229121,0.505157755894224,0,0.964887042726734,2.40179147216586,0.37898282354097,0.325929952884052,0.169745085775188,0.704070744865506,0.502518772325447,0.476087281772027,0.975668239288994,0.788175720530955,0.8858587585951,1.11618338060241,0.81931657357869,1.20879487306127,1.73578870297814,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0.780877488593277,0.646270193198397,0.477937595905104,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0,0.321321316421807,0.851640511249612,0.35613120733451,0.488660878060728,0.494910368917606,0,0.242780636154981,0,0,0.885905678642318,0,0,0.727067458955011,0.356497378384721,0,0,0,0,0.540183282093931,0,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,1.0591603543191,0.220528398054962,0.98931751764888,0.645857706783622,0.361877549568935,0.477489376012546,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0.509935289981566,0.139951452323658,0.414599921413271,0.954670618015114,0.316335993581135,0.203319467126849,0.216010681643603,0,0.218362563746178,0.134864346384821,0.495920734352016,0,0.129614973291793,0,0,0.747582730219894,0,0,0.387479470433193,0.506868376472335,0.234714477291508,0.39061315453185,0.419437377702843,0,0,0,0,0,0.129920822977795,0,0,0,0.295379054349154,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0.906921534460845,0.221985953374065,0.179427713218951,0.167884616364078,0.386379188064381,0.187682475451182,0.73260649706906,0.214368379079066,0,1.12950368523413,0.460325236507177,1.14579102687879,0.515559547031063,0,0,1.35004500046361,0.45032120322422,0,0.51776031175182,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0.64183841918363,0,0.50695859978048,0.188626341386076,0.187283014939765,0.512201219238954,0.114870937911227,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.726732083161643,0.470546902076653,0.592302255241736,0.365855945745545,0,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0,0.309873682371932,0.385813221962283,0.499621155875892,0,0,0.191288332068843,0.441182838239031,0.463735671240843 | |||
|short_description=p@chr1:59820528..59820529,+ | |||
}} |
Latest revision as of 19:48, 5 August 2015
Short description: | p@chr1:59820528..59820529, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:59820528..59820529, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.57e-10 | 3 |
extraembryonic structure | 7.57e-10 | 3 |
membranous layer | 7.57e-10 | 3 |
amnion | 3.50e-08 | 1 |
lung | 3.79e-08 | 14 |
respiratory tube | 3.79e-08 | 14 |
respiration organ | 3.79e-08 | 14 |
pair of lungs | 3.79e-08 | 14 |
lung primordium | 3.79e-08 | 14 |
lung bud | 3.79e-08 | 14 |
corpora quadrigemina | 1.05e-07 | 1 |
midbrain tectum | 1.05e-07 | 1 |
neural tube mantle layer | 1.05e-07 | 1 |
tectal plate | 1.05e-07 | 1 |
neural tube alar plate | 1.05e-07 | 1 |
epithelial bud | 9.65e-07 | 17 |
thoracic cavity element | 9.65e-07 | 17 |
thoracic segment organ | 9.65e-07 | 17 |
thoracic cavity | 9.65e-07 | 17 |
thoracic segment of trunk | 9.65e-07 | 17 |
respiratory primordium | 9.65e-07 | 17 |
endoderm of foregut | 9.65e-07 | 17 |