FFCP PHASE1:Hg19::chrX:99665262..99665280,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:99665262..99665280,-
|short_description=p1@PCDH19
|description=CAGE_peak_1_at_PCDH19_5end
|association_with_transcript=0bp_to_ENST00000255531,ENST000003730...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57526 | |EntrezGene=57526 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14270 | |HGNC=14270 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAB3,B3KU71,E9PAM6 | |UniProt=Q8TAB3,B3KU71,E9PAM6 | ||
|association_with_transcript=0bp_to_ENST00000255531,ENST00000373034,NM_001105243,NM_001184880,NM_020766,uc004efw.3,uc004efx.3,uc010nmz.2_5end | |||
|cluster_id=chrX:99665262..99665280,- | |||
|description=CAGE_peak_1_at_PCDH19_5end | |||
|id=chrX:99665262..99665280,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002321;1.65e-07;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.33e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.74e-35!115;UBERON:0001017!5.27e-32!82;UBERON:0001049!1.26e-31!57;UBERON:0005068!1.26e-31!57;UBERON:0006241!1.26e-31!57;UBERON:0007135!1.26e-31!57;UBERON:0000073!3.52e-31!94;UBERON:0001016!3.52e-31!94;UBERON:0005743!4.20e-30!86;UBERON:0002616!6.84e-29!59;UBERON:0003080!1.21e-26!42;UBERON:0000955!2.61e-26!69;UBERON:0006238!2.61e-26!69;UBERON:0002780!4.63e-26!41;UBERON:0001890!4.63e-26!41;UBERON:0006240!4.63e-26!41;UBERON:0002346!1.35e-24!90;UBERON:0003075!3.16e-24!86;UBERON:0007284!3.16e-24!86;UBERON:0002020!8.71e-24!34;UBERON:0003528!8.71e-24!34;UBERON:0000924!9.71e-24!173;UBERON:0006601!9.71e-24!173;UBERON:0001893!1.14e-23!34;UBERON:0004121!3.55e-23!169;UBERON:0002791!5.37e-23!33;UBERON:0001869!6.52e-23!32;UBERON:0003056!4.69e-19!61;UBERON:0000956!7.74e-19!25;UBERON:0000203!7.74e-19!25;UBERON:0000153!5.07e-18!129;UBERON:0007811!5.07e-18!129;UBERON:0000033!1.19e-17!123;UBERON:0002619!1.94e-17!22;UBERON:0001950!5.35e-16!20;UBERON:0000468!1.36e-14!659;UBERON:0000475!5.31e-11!365;UBERON:0000922!3.47e-10!612;UBERON:0000467!4.22e-10!625;UBERON:0000480!6.28e-10!626;UBERON:0000119!2.11e-09!312;UBERON:0000483!3.46e-09!309;UBERON:0000025!4.81e-09!194;UBERON:0004111!5.75e-09!241;UBERON:0002050!2.44e-08!605;UBERON:0005423!2.44e-08!605;UBERON:0000923!4.35e-08!604;UBERON:0005291!4.35e-08!604;UBERON:0006598!4.35e-08!604;UBERON:0002532!4.35e-08!604;UBERON:0000064!5.45e-08!219;UBERON:0000477!8.46e-08!286;UBERON:0001871!6.33e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.58e-25;32!UBERON:0003528;3.16e-25;34!UBERON:0002020;3.16e-25;34!UBERON:0002791;4.42e-25;32!UBERON:0001893;4.68e-25;34!UBERON:0002780;4.42e-23;41!UBERON:0001890;4.42e-23;41!UBERON:0000956;5.57e-23;25!UBERON:0000203;5.57e-23;25!UBERON:0002619;3.07e-21;22!UBERON:0000073;3.94e-20;53!UBERON:0002616;3.94e-20;53!UBERON:0001950;1.87e-19;20!UBERON:0001017;7.77e-15;75!UBERON:0000955;2.77e-14;68!UBERON:0001016;2.37e-13;83!UBERON:0000922;4.17e-13;49!UBERON:0007023;1.19e-11;114!UBERON:0002420;7.53e-08;9!UBERON:0007245;7.53e-08;9!UBERON:0010009;7.53e-08;9!UBERON:0010011;7.53e-08;9!UBERON:0000454;7.53e-08;9!UBERON:0000125;1.28e-07;9!UBERON:0002308;1.28e-07;9!UBERON:0001871;2.14e-07;6!UBERON:0000200;9.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.97e-41,114;UBERON:0001049,2.05e-37,56;UBERON:0005068,2.05e-37,56;UBERON:0006241,2.05e-37,56;UBERON:0007135,2.05e-37,56;UBERON:0000073,2.90e-35,53;UBERON:0002616,2.90e-35,53;UBERON:0001017,3.28e-35,81;UBERON:0001016,4.21e-35,89;UBERON:0002780,6.78e-32,41;UBERON:0001890,6.78e-32,41;UBERON:0003080,6.78e-32,41;UBERON:0006240,6.78e-32,41;UBERON:0002346,2.17e-30,86;UBERON:0000955,7.78e-30,68;UBERON:0006238,7.78e-30,68;UBERON:0003075,9.31e-30,82;UBERON:0007284,9.31e-30,82;UBERON:0003528,4.47e-29,34;UBERON:0002020,4.47e-29,34;UBERON:0001893,6.27e-29,34;UBERON:0001869,5.43e-28,32;UBERON:0002791,1.80e-27,32;UBERON:0003056,1.07e-24,61;UBERON:0010371,1.96e-24,104;UBERON:0004121,1.37e-23,171;UBERON:0000924,1.37e-23,171;UBERON:0006601,1.37e-23,171;UBERON:0000956,6.09e-23,25;UBERON:0000203,6.09e-23,25;UBERON:0002619,3.29e-21,22;UBERON:0001950,2.01e-19,20;UBERON:0010314,1.26e-16,132;UBERON:0011216,5.18e-14,223;UBERON:0000025,3.56e-11,192;UBERON:0004111,1.04e-10,240;UBERON:0000922,2.24e-09,592;UBERON:0000483,3.57e-08,306;UBERON:0000119,4.72e-08,309;UBERON:0002420,8.09e-08,9;UBERON:0007245,8.09e-08,9;UBERON:0010009,8.09e-08,9;UBERON:0010011,8.09e-08,9;UBERON:0000454,8.09e-08,9;UBERON:0000125,1.37e-07,9;UBERON:0002308,1.37e-07,9;UBERON:0001871,2.27e-07,6;UBERON:0002050,2.71e-07,564;UBERON:0003076,3.83e-07,15;UBERON:0003057,3.83e-07,15;UBERON:0005423,4.88e-07,581;UBERON:0000923,5.16e-07,560;UBERON:0010316,5.16e-07,560;UBERON:0005291,5.16e-07,560;UBERON:0006598,5.16e-07,560;UBERON:0010317,5.16e-07,560;UBERON:0002532,5.16e-07,560;UBERON:0000200,9.61e-07,6 | |||
|phase1_expression=0.726713517082227,2.35510576280081,0.986680828671798,1.0007329835313,1.78784437770915,0,0,0,0,0,0.697801167972428,0.436882744260345,0.527533956456907,0.247532705920093,0,1.34465029290355,0,0,0,0.738726348460727,0,2.5076377718247,8.5870796139317,8.07559107930017,16.8227137057036,0,0,0,0,0,2.47705797305722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3151470469198,1.94653948121054,21.3648686790793,19.7339163741682,18.3574702098633,12.1155644835384,0,0,0,0,0,0,0,0,2.98143611050058,2.58070378531837,5.55424802572151,6.21838736116411,2.93649605346934,1.92582629358047,4.38889429727302,1.29208379584664,3.20189636418039,4.01664735317604,4.02829317109147,0,1.70843440283719,3.30896772311282,3.24056779152704,2.94689103337463,5.16417557040191,1.35133776579987,9.19899824795299,5.69559395740877,3.48083313467774,0,0,0.436094052142534,0.993943903390637,0,0,0,1.06400514659507,0,0,0,0.311211035399766,0.134710672069688,0,5.60022482286246,2.88087962239999,0,0,0.570471821544449,0.298897361103602,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.516628905878827,0,0.247266929278557,0,0,0,0.375355559615893,0,0.438977620880838,0,0.150238058906597,0,3.58779271377724,1.70845911054854,0.423863802319124,2.10063767259082,1.33968288009971,1.03056216018252,0.930584281657949,0.843881661206331,0,0,0.0920498986422993,0.323292113637624,1.42003837006646,0.201504196455281,0,1.93260853163297,3.54569956768085,4.01526433544605,5.00092195131341,3.18071443971565,6.85544262930159,13.0612929319367,6.30802127189071,8.02950189966826,3.12899064659632,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0.982827216677626,0,16.7755977777567,0,1.02940686179115,0.439001141634502,0,0,0.185176890317059,0,0,1.44331342025273,46.0243707751055,0.587043471179108,0.288732895522148,0,0.761016608938393,0.790204397959275,0.858486162094873,0,0,0,0,7.39121364074982,0.567100388969546,0.626909658919938,0,0.766765358330422,0.492663237895943,0,0.621984346622316,0.432359860250884,0.25248486685276,0,0.381988425558278,0,5.13217338068116,0.205654985406647,0,0,0.448524337381443,1.74384027533312,0.51336800074665,9.95392211334889,0,0,6.38251479803689,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,7.13184525203592,5.64647096003559,1.84928690295345,7.34149949283572,0,0.394061520403854,0.215627574859517,0,101.12966044054,46.8503473887438,3.86644406388848,8.87836206272048,13.3967137847164,0,0,0,0.36807447515742,1.50051156317903,0,0,0.178428988797162,0,0,4.21324539618807,0,2.0694614258501,0.664225598535437,1.65932251687533,0,2.34961388955289,8.23544217146054,0,0,0,2.12189300012382,0,0.30239029332968,0.992431231275107,0.767309866440312,0.561320188866147,0.128139149255701,2.55853624533352,0.160853921143607,0,0.308419387605311,0.177561725313127,0,0,0,0.241718899183244,0.601519410909855,0,0.114814448164607,0,0,0,0.385076685522074,0,0,0.316654886678627,2.27466768141793,0,0.431831832204279,0,0,0,0,0.831076008928724,0,0,0,0,0,0,1.03041011647722,0.0915694648183434,0.082509499920588,0.574265537996172,0,0,1.25671933779759,0.616194468458578,0.460511024178389,0.275673144969061,1.6113036730241,1.30515024522806,0.596586391912706,11.3961005627824,0.330569830721956,2.69066094311149,1.65896526242959,0.4046311234222,0,0,0,0,0,1.73986598415015,1.29726953372744,0,0.744316738719335,0.316379424718726,0,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,1.65409603063837,3.98063385144732,3.06915619677634,0,0,0.405820753925408,0.92947049429925,0.281695602532241,1.29070216983646,0,0.35667105148125,0,0,0,0,0,0,0.670302275535787,0,0.659006605437454,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,2.35012956480441,0.962479855263359,1.71528151186722,0,0,0,21.0442680002045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6504620158648,1.4098700508785,0,20.6576532773371,0.242721043499027,0,0,1.19372242368845,1.48482340416319,2.15012491469462,161.05191893814,91.7164594996543,3.89580467580171,0,32.513312851711,5.97743964753209,5.24939439509181,0,0.102268682502155,0,0,0,0,0,6.31317796076375,0,0,40.7119753359992,55.9391631915963,181.648556181087,4.94812746061943,1.57427999993152,17.399989810435,1.93448862085349,3.81380475439149,0.236387681767936,1.72371686620732,0.874813840149763,1.90987494426621,13.2861207872076,18.0894657938112,4.5774520895125,3.75969483766164,4.43321428430321,51.1167975368756,0,2.23077990845765,12.0811905850961,0,0.69169171316418,0,0.217294743844016,0.957003479195758,3.48070854927077,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,1.46909527343233,0.848118428603645,87.2046218160627,7.96209544862804,4.5113357896703,3.66618086960175,7.70954934569617,10.9971905662388,13.6792753852147,11.7951982716185,7.2231988256891,9.37057782901357,0,40.6982407378747,0,3.94584402849391,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| ||
|short_description=p1@PCDH19 | |||
}} | }} |
Latest revision as of 15:48, 16 September 2015
Short description: | p1@PCDH19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDH19_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000255531, ENST00000373034, NM_001105243, NM_001184880, NM_020766, uc004efw.3, uc004efx.3, uc010nmz.2_5end |
EntrezGene: | PCDH19 |
HGNC: | 14270 |
UniProt: | Q8TAB3B3KU71E9PAM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data