FFCP PHASE1:Hg19::chr6:32636163..32636177,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100293977,3119 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4944 | |||
|TSSclassifier=strong | |||
|UniProt=Q5Y7D6 | |||
|association_with_transcript=-3bp_to_ENST00000399084_5end | |||
|cluster_id=chr6:32636163..32636177,- | |||
|coexpression_cluster_id=C4594 | |||
|description=CAGE_peak_4_at_HLA-DQB1_5end | |||
|id=chr6:32636163..32636177,- | |||
|ontology_enrichment_celltype=CL:0000738!2.51e-62!140;CL:0002087!1.50e-51!119;CL:0002031!9.67e-49!124;CL:0000037!1.46e-47!172;CL:0000566!1.46e-47!172;CL:0000988!5.23e-44!182;CL:0002032!8.33e-43!165;CL:0000837!8.33e-43!165;CL:0002057!6.79e-36!42;CL:0000860!5.94e-33!45;CL:0000766!1.60e-27!76;CL:0002009!1.92e-27!65;CL:0002194!2.39e-26!63;CL:0000576!2.39e-26!63;CL:0000040!2.39e-26!63;CL:0000559!2.39e-26!63;CL:0000557!3.68e-26!71;CL:0000839!1.33e-24!70;CL:0000838!1.19e-21!52;CL:0000542!4.16e-21!53;CL:0000051!4.16e-21!53;CL:0000763!5.05e-21!112;CL:0000049!5.05e-21!112;CL:0000236!1.35e-16!14;CL:0000134!1.73e-15!358;CL:0002320!7.25e-15!365;CL:0000945!2.71e-14!24;CL:0000826!2.71e-14!24;CL:0000451!1.62e-13!10;CL:0000219!1.11e-12!390;CL:0000034!1.92e-10!444;CL:0000048!4.34e-10!430;CL:0000723!1.01e-09!436;CL:0000990!1.53e-09!8;CL:0000784!1.44e-08!3;CL:0000453!1.61e-08!5;CL:0002393!3.50e-07!9;CL:0002397!3.50e-07!9;CL:0000084!3.66e-07!25;CL:0000827!3.66e-07!25;CL:0000625!5.35e-07!11;CL:0000791!6.38e-07!18;CL:0000789!6.38e-07!18;CL:0002420!6.38e-07!18;CL:0002419!6.38e-07!18;CL:0000790!6.38e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.15e-33;33!CL:0002057;2.15e-33;33!CL:0000236;5.98e-25;13!CL:0000473;1.22e-22;39!CL:0000234;1.22e-22;39!CL:0000576;1.33e-20;48!CL:0002087;1.41e-16;104!CL:0000766;5.77e-15;69!CL:0000451;1.45e-13;10!CL:0000784;1.76e-13;3!CL:0000945;9.50e-13;24!CL:0000738;2.40e-12;136!CL:0002393;2.83e-12;6!CL:0002397;2.83e-12;6!CL:0000453;2.23e-08;5!CL:0000542;2.55e-08;53!CL:0000988;6.05e-08;177!CL:0000990;6.27e-08;8!CL:0000219;1.56e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.04e-55,136;CL:0002087,4.42e-46,115;CL:0000037,1.99e-43,168;CL:0000860,1.80e-42,42;CL:0002057,1.80e-42,42;CL:0002031,2.29e-41,120;CL:0000988,9.13e-41,177;CL:0002032,8.78e-37,161;CL:0000837,8.78e-37,161;CL:0000473,1.77e-36,48;CL:0000234,1.77e-36,48;CL:0002009,5.75e-33,61;CL:0002194,4.40e-31,59;CL:0000576,4.40e-31,59;CL:0000040,4.40e-31,59;CL:0000559,4.40e-31,59;CL:0000766,1.01e-29,72;CL:0000557,1.55e-29,67;CL:0000839,3.04e-27,66;CL:0000763,1.86e-23,108;CL:0000049,1.86e-23,108;CL:0000236,3.18e-23,14;CL:0000134,8.79e-16,354;CL:0002320,2.71e-15,361;CL:0000451,1.42e-13,10;CL:0000219,1.43e-13,386;CL:0000784,1.80e-13,3;CL:0000945,7.58e-13,24;CL:0000826,7.58e-13,24;CL:0000838,2.08e-12,52;CL:0000542,4.07e-12,53;CL:0000051,4.07e-12,53;CL:0000034,1.32e-11,441;CL:0000048,1.83e-11,427;CL:0000723,3.57e-11,433;CL:0000453,2.15e-08,5;CL:0002393,3.51e-08,9;CL:0002397,3.51e-08,9;CL:0000990,6.05e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.47e-31;42!CL:0000051;2.55e-08;53!CL:0000049;4.07e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.80e-27!102;UBERON:0003061!7.80e-27!102;UBERON:0002193!7.79e-25!112;UBERON:0002371!9.06e-24!80;UBERON:0001474!1.79e-21!86;UBERON:0004765!6.00e-17!101;UBERON:0001434!6.00e-17!101;UBERON:0002405!6.79e-16!115;UBERON:0002384!5.11e-14!375;UBERON:0003081!5.05e-09!216;UBERON:0002204!5.48e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.17e-26,98;UBERON:0003061,3.17e-26,98;UBERON:0002371,2.16e-25,76;UBERON:0002193,3.36e-23,108;UBERON:0001474,3.93e-23,82;UBERON:0004765,1.39e-20,90;UBERON:0002405,9.66e-20,93;UBERON:0001434,5.69e-18,100;UBERON:0002384,1.26e-14,371;UBERON:0003081,2.36e-09,203;UBERON:0002204,1.40e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,10.8371286321253,0,0,0,0.0774672005803016,0,0,0,16.8457335874919,22.3521196837327,0,0.32389366601898,0,0,1.13362783106643,0.727752183563449,0,0,2.16794459626573,0,3.33008918487831,7.33094912654614,0,1.29096936716765,4.06279459783025,0,0.272906150057846,1.79778787556068,0,0.962787081228281,1.27867425159808,0,2.19410023383795,2.13112375266347,0,1.13477044938228,1.86846674698672,0,2.60741459210101,3.04064382587163,0,3.31449872388808,5.06339819905415,0,4.67729459923096,8.17668717482666,0.112328631146495,2.70318407114711,2.25015821375912,0,0,0.730656615058536,3.51992488922645,4.91524750135918,2.66852776159066,0,0.400395987036012,7.47178171940828,5.2883589822789,7.63243003628291,1.70763890732835,8.22132065119314,1.52909291250092,0,1.12101712596307,0.790152254325231,0,0.393010762749165,1.64481199199607,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0.637130828648193,0,0,0,0,1.24930726552346,1.18388626022008,1.64225599384209,0,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,7.63169997777094,3.43196946468077,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,1.41177339907723,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80428461064202,3.41528184971022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0237206860235,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,2.65729680626726,4.41626564490779,0,0,0,0.59996218756479,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p4@HLA-DQB1 | |||
}} |
Latest revision as of 03:48, 18 September 2015
Short description: | p4@HLA-DQB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HLA-DQB1_5end |
Coexpression cluster: | C4594_CD14_immature_CD19_Basophils_Dendritic_migratory_Eosinophils |
Association with transcript: | -3bp_to_ENST00000399084_5end |
EntrezGene: | 100293977,3119 |
HGNC: | 4944 |
UniProt: | Q5Y7D6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.17e-26 | 98 |
blood island | 3.17e-26 | 98 |
bone marrow | 2.16e-25 | 76 |
hemolymphoid system | 3.36e-23 | 108 |
bone element | 3.93e-23 | 82 |
skeletal element | 1.39e-20 | 90 |
immune system | 9.66e-20 | 93 |
skeletal system | 5.69e-18 | 100 |
connective tissue | 1.26e-14 | 371 |
lateral plate mesoderm | 2.36e-09 | 203 |
musculoskeletal system | 1.40e-08 | 167 |