FFCP PHASE1:Hg19::chr6:32160607..32160614,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63940 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13945 | |||
|TSSclassifier=strong | |||
|UniProt=E9PIP3 | |||
|association_with_transcript=30bp_to_ENST00000487761_5end | |||
|cluster_id=chr6:32160607..32160614,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_6_at_GPSM3_5end | |||
|id=chr6:32160607..32160614,- | |||
|ontology_enrichment_celltype=CL:0000037!1.81e-38!172;CL:0000566!1.81e-38!172;CL:0000988!7.28e-35!182;CL:0000738!2.45e-34!140;CL:0002032!1.87e-33!165;CL:0000837!1.87e-33!165;CL:0002087!1.61e-31!119;CL:0002031!1.13e-26!124;CL:0000084!3.65e-26!25;CL:0000827!3.65e-26!25;CL:0000542!3.10e-23!53;CL:0000051!3.10e-23!53;CL:0000838!1.80e-22!52;CL:0000791!5.22e-22!18;CL:0000789!5.22e-22!18;CL:0002420!5.22e-22!18;CL:0002419!5.22e-22!18;CL:0000790!5.22e-22!18;CL:0000625!1.86e-13!11;CL:0000763!1.07e-12!112;CL:0000049!1.07e-12!112;CL:0000766!5.52e-11!76;CL:0002057!3.04e-10!42;CL:0000624!1.43e-09!6;CL:0000860!3.83e-09!45;CL:0000557!9.42e-09!71;CL:0002194!3.38e-08!63;CL:0000576!3.38e-08!63;CL:0000040!3.38e-08!63;CL:0000559!3.38e-08!63;CL:0000839!4.18e-08!70;CL:0000134!5.05e-08!358;CL:0002009!9.84e-08!65;CL:0002320!1.82e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.06e-38;18!CL:0000789;3.06e-38;18!CL:0002419;3.06e-38;18!CL:0000084;1.57e-31;25!CL:0000625;4.19e-22;11!CL:0000624;8.34e-21;6!CL:0000898;6.27e-16;3!CL:0000226;2.21e-15;3!CL:0000842;2.21e-15;3!CL:0000815;2.20e-11;2!CL:0000792;2.20e-11;2!CL:0002677;2.20e-11;2!CL:0000542;3.15e-08;53!CL:0000775;9.69e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.39e-38,18;CL:0000789,1.39e-38,18;CL:0002420,1.39e-38,18;CL:0002419,1.39e-38,18;CL:0000790,1.39e-38,18;CL:0000084,1.13e-31,25;CL:0000827,1.13e-31,25;CL:0000625,3.17e-22,11;CL:0000624,4.49e-21,6;CL:0000898,2.92e-16,3;CL:0000226,4.46e-15,3;CL:0000842,4.46e-15,3;CL:0000838,8.47e-14,52;CL:0000542,1.74e-13,53;CL:0000051,1.74e-13,53;CL:0000815,1.89e-11,2;CL:0000792,1.89e-11,2;CL:0002677,1.89e-11,2;CL:0000738,3.25e-10,136;CL:0002087,4.87e-10,115;CL:0000037,1.95e-08,168;CL:0000988,8.71e-08,177;CL:0000775,9.55e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.06e-38;18!CL:0000051;3.15e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!2.15e-07!51;DOID:0060083!2.15e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.04e-17!102;UBERON:0003061!1.04e-17!102;UBERON:0002193!1.41e-17!112;UBERON:0000178!4.03e-11!15;UBERON:0000179!4.03e-11!15;UBERON:0000463!4.03e-11!15;UBERON:0002405!1.96e-08!115;UBERON:0002371!1.45e-07!80;UBERON:0002384!1.73e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.60e-32;15!UBERON:0000179;9.60e-32;15!UBERON:0000463;9.60e-32;15!UBERON:0002390;7.31e-20;32!UBERON:0002193;2.86e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.09e-31,15;UBERON:0000179,1.09e-31,15;UBERON:0000463,1.09e-31,15;UBERON:0002390,3.48e-08,98;UBERON:0003061,3.48e-08,98;UBERON:0002193,3.71e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0.387336002901508,0,0.293600439334847,0,0,0.434021741431704,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0.822335776043652,0,0,0.256160706529101,0,0,0,2.70852973188684,0.376484679085209,0,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0.211255286311942,0.425208599930087,0.419317291016752,0.336985893439485,0.300353785683013,0,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0.587237189370939,0,0,0.560508562981536,0,1.7703879310245,0.393010762749165,1.02800749499755,0.668745981562712,4.23698946623668,1.89379122293893,5.84480185223734,0.334231370655521,1.47302953737419,0.221533894583621,0.812411591295047,0.25618263945135,0.260118695119756,0.164437904603676,0.552700035571697,1.15921234294021,2.37258501059297,2.94294910898684,5.22677619024884,1.0197840842781,1.91610246800961,1.71813722741315,2.27717722817553,3.18565414324097,2.60433381542567,0.950452044448374,3.16207750063323,2.55973222308837,1.24930726552346,1.4206635122641,1.64225599384209,0.80642697289893,0,0.579297615531196,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,0,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0.646882724578552,0.385029108839245,0,0,0,0,0,1.49801404789436,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.2942852049117,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,3.0585488285695,0.569647187174163,2.62054953003568,1.23408681925858,1.29694662238543,1.62009431171434,3.17250070517708,0,0,0,0.185803175125719,0.144269212976445,0.497992903438899,0.318852545457645,0.399158742865633,0.5745161103971,0.211673582723883,0,0,0,0,0,0.169291777801603,0.321176150207399,0,0,0,0,0,0,0.19538809540204,0,0,0,0.66614393599564,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0.19606253431774,0.335643173951685,0,0.317873157960757,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0.19998739585493,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0.850299680406731,0,1.11728983594649,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0.230467975111559,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.452122368852043,1.61394257169231,0,0,0,0,0,0.336760265072938,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p6@GPSM3 | |||
}} |
Latest revision as of 02:24, 18 September 2015
Short description: | p6@GPSM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPSM3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 30bp_to_ENST00000487761_5end |
EntrezGene: | GPSM3 |
HGNC: | 13945 |
UniProt: | E9PIP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.39e-38 | 18 |
alpha-beta T cell | 1.39e-38 | 18 |
immature T cell | 1.39e-38 | 18 |
mature T cell | 1.39e-38 | 18 |
immature alpha-beta T cell | 1.39e-38 | 18 |
T cell | 1.13e-31 | 25 |
pro-T cell | 1.13e-31 | 25 |
CD8-positive, alpha-beta T cell | 3.17e-22 | 11 |
CD4-positive, alpha-beta T cell | 4.49e-21 | 6 |
naive T cell | 2.92e-16 | 3 |
single nucleate cell | 4.46e-15 | 3 |
mononuclear cell | 4.46e-15 | 3 |
lymphoid lineage restricted progenitor cell | 8.47e-14 | 52 |
lymphocyte | 1.74e-13 | 53 |
common lymphoid progenitor | 1.74e-13 | 53 |
regulatory T cell | 1.89e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.89e-11 | 2 |
naive regulatory T cell | 1.89e-11 | 2 |
leukocyte | 3.25e-10 | 136 |
nongranular leukocyte | 4.87e-10 | 115 |
hematopoietic stem cell | 1.95e-08 | 168 |
hematopoietic cell | 8.71e-08 | 177 |
neutrophil | 9.55e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.09e-31 | 15 |
haemolymphatic fluid | 1.09e-31 | 15 |
organism substance | 1.09e-31 | 15 |
hematopoietic system | 3.48e-08 | 98 |
blood island | 3.48e-08 | 98 |
hemolymphoid system | 3.71e-07 | 108 |