FFCP PHASE1:Hg19::chr6:31553978..31554060,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7940 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14189 | |||
|TSSclassifier=strong | |||
|UniProt=Q5STB1 | |||
|association_with_transcript=0bp_to_ENST00000376096,ENST00000376099,ENST00000376110,ENST00000488959_5end | |||
|cluster_id=chr6:31553978..31554060,+ | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_1_at_LST1_5end | |||
|id=chr6:31553978..31554060,+ | |||
|ontology_enrichment_celltype=CL:0000037!7.15e-56!172;CL:0000566!7.15e-56!172;CL:0002032!1.11e-51!165;CL:0000837!1.11e-51!165;CL:0000988!7.07e-50!182;CL:0000763!1.19e-49!112;CL:0000049!1.19e-49!112;CL:0000738!6.01e-45!140;CL:0000766!6.83e-42!76;CL:0002031!1.27e-37!124;CL:0000557!5.07e-37!71;CL:0002087!1.50e-36!119;CL:0002009!2.49e-36!65;CL:0000839!5.45e-36!70;CL:0002194!6.23e-35!63;CL:0000576!6.23e-35!63;CL:0000040!6.23e-35!63;CL:0000559!6.23e-35!63;CL:0002057!7.91e-32!42;CL:0000860!4.20e-28!45;CL:0002393!1.72e-08!9;CL:0002397!1.72e-08!9;CL:0000134!4.05e-08!358;CL:0000094!6.74e-08!8;CL:0002320!3.58e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.81e-26;33!CL:0002057;3.81e-26;33!CL:0000576;4.82e-26;48!CL:0000473;9.77e-26;39!CL:0000234;9.77e-26;39!CL:0000766;6.31e-22;69!CL:0000763;4.81e-19;100!CL:0000738;2.81e-11;136!CL:0002087;5.45e-11;104!CL:0000988;1.13e-09;177!CL:0000094;5.39e-09;8!CL:0002393;9.37e-07;6!CL:0002397;9.37e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.71e-60,108;CL:0000049,3.71e-60,108;CL:0000037,8.26e-60,168;CL:0002032,5.04e-55,161;CL:0000837,5.04e-55,161;CL:0000988,4.20e-54,177;CL:0000766,2.62e-52,72;CL:0002009,5.20e-48,61;CL:0000738,2.32e-47,136;CL:0000557,1.94e-46,67;CL:0002194,2.42e-46,59;CL:0000576,2.42e-46,59;CL:0000040,2.42e-46,59;CL:0000559,2.42e-46,59;CL:0000839,3.44e-45,66;CL:0000473,9.31e-42,48;CL:0000234,9.31e-42,48;CL:0002031,6.00e-40,120;CL:0002087,1.44e-39,115;CL:0000860,4.60e-37,42;CL:0002057,4.60e-37,42;CL:0002393,1.10e-09,9;CL:0002397,1.10e-09,9;CL:0000094,5.45e-09,8;CL:0000134,1.25e-08,354;CL:0002320,8.33e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-26;42!CL:0000049;3.12e-17;108 | |||
|ontology_enrichment_disease=DOID:8692!9.52e-10!31;DOID:1240!4.22e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.68e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.72e-11,31;DOID:1240,1.63e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.95e-39!112;UBERON:0002390!3.85e-39!102;UBERON:0003061!3.85e-39!102;UBERON:0002371!4.49e-31!80;UBERON:0007023!2.06e-27!115;UBERON:0002405!5.46e-27!115;UBERON:0001474!1.28e-26!86;UBERON:0004765!1.46e-20!101;UBERON:0001434!1.46e-20!101;UBERON:0003081!1.13e-15!216;UBERON:0002204!1.33e-07!167;UBERON:0001049!2.88e-07!57;UBERON:0005068!2.88e-07!57;UBERON:0006241!2.88e-07!57;UBERON:0007135!2.88e-07!57;UBERON:0000178!3.32e-07!15;UBERON:0000179!3.32e-07!15;UBERON:0000463!3.32e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.35e-08;15!UBERON:0000179;1.35e-08;15!UBERON:0000463;1.35e-08;15!UBERON:0007023;3.72e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.45e-49,98;UBERON:0003061,5.45e-49,98;UBERON:0002193,5.03e-48,108;UBERON:0002405,8.37e-40,93;UBERON:0002371,5.39e-39,76;UBERON:0001474,4.64e-34,82;UBERON:0004765,1.42e-28,90;UBERON:0007023,8.00e-27,114;UBERON:0001434,1.66e-24,100;UBERON:0003081,1.73e-17,203;UBERON:0000178,1.36e-08,15;UBERON:0000179,1.36e-08,15;UBERON:0000463,1.36e-08,15;UBERON:0002204,6.85e-08,167;UBERON:0002384,4.94e-07,371 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.229240217243854,0.410502947249729,0.236132343941038,490.525253230583,183.854281688565,362.424544682934,0,0,0,0.852139206383318,0.142169232487422,11.7440175733939,196.114374620285,140.98274657151,154.945761691118,34.9308139814282,19.4336199611388,32.1969459542733,169.098151700634,163.998159560943,187.032311175806,188.035090856699,159.121972664447,194.80530729302,217.495448595546,198.780708266582,286.852944854854,155.825047692952,116.187243045089,155.740459583493,188.61882422169,161.833346984303,260.005071502963,205.688375673247,195.445777489341,225.046668281263,179.109256001387,190.886720343902,201.178082251432,192.118515972123,126.526905106124,163.179429236841,202.506424196935,210.679099041761,305.584704500099,144.690481129375,195.187147073409,259.499157701525,1375.90567974968,1375.7624250738,1126.91521960752,475.59942427426,453.384039488508,277.573088225857,2672.56449806169,2355.96912474602,1961.44768312464,1.75996244461323,15.2918811153397,1.77901850772711,32.004766692488,2.00197993518006,9.77079147922622,15.2040320740518,8.58648379081828,1.70763890732835,6.45960908308033,1.14681968437569,9.25199300053181,30.2674624010029,16.5931973408299,1.37696839079683,1.57204305099666,2.46721798799411,2.34061093546949,0,0,0,1.33692548262208,0,0.443067789167242,0.270803863765016,0.512365278902701,0.390178042679635,3.28875809207352,2.76350017785848,7.53488022911136,0.593146252648242,0.802622484269139,1.04535523804977,5.77877647757588,1.14966148080576,1.03088233644789,0.759059076058509,16.2468361305289,2.60433381542567,1.90090408889675,28.0069721484657,12.542687893133,29.983374372563,41.436019107703,16.4225599384209,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.614843499851882,8.12070268085818,0,0,60.3658152197711,71.2190625554003,130.963591111082,23.1335905576182,29.1717404497865,18.9443325678078,0,0,1.04142150482278,0,1.25849830862972,0.550236083880135,0.417989933073621,0.258416759169329,0.35576626268671,0,2.81980521976403,0.760272105718513,1.70843440283719,0.735326160691737,0,0.446498641420399,0.44905874525234,0.225222960966644,0,0,0.183201743930407,1412.6860749146,1997.06836036388,0,0,0,0,0,1.77334191099179,0,0,0.98667019366864,0.311211035399766,1.21239604862719,0.980771418680752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,1.02088964844019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,27.5191620669735,8.86184860022106,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,22.6655322984886,41.2057106193184,24.3525314860286,0,0,147.237769640264,116.76812830448,141.348235336581,0.93733833986777,0,0,0,0,0,0.985326475791887,3.34584049250259,0.414656231081544,1.58531948758658,1.13618190083742,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,131.353683092486,204.920893304308,141.258739453631,0,0,0,0.144781306667579,0,0,1.2329365839288,10.4426302907021,1.2937654491571,8.72732646702289,0,0,0,2.01019518401218,0,927.270695646612,658.155210248855,814.740899415246,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,138.534577502335,193.279923933481,100.964269682058,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,3.06963827304308,6.01301537357271,0,0,0,11.8497163394881,0,0,0,0,0,0,0,0,0,0,0,1.19317278382541,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0.318203247925937,1.56989728039846,0,0,0,0.606547444719948,0,0,0,0.243713489631284,0,0,0,0,0,0,0.876901770507525,0,0,0,5.88664646389525,0,0,0,0,0,1.47775344708365,0,0,0,0,1.34060455107157,0,11.7679750970974,0,0,0,0,547.028522752279,530.658221756808,530.341531259145,338.050889374603,440.9803567484,582.977506762253,482.788104890875,467.150728837325,0,1.92495971052672,0,0.185803175125719,0,0,0.637705090915289,16.7646672003566,98.2422548779041,95.4647858084712,7.46630462631478,8.98550969963068,25.1058146936511,44.6537702953116,55.1395849598148,46.0473635620361,109.199891070516,26.8393610564093,39.17785386751,95.4944858421026,149.626252218219,159.481064927293,171.020370254706,124.657604866502,0.556812347790485,0,23.2591883489345,5.32915148796512,1.4098700508785,0,7.3254089635947,0,0,0,0,6.83018765915069,0,2.98244294329889,5.48610724001,0,0,0,5.57894367102995,4.42054264849836,0,0,0,0,0,0,97.7103227133325,1.08507746200627,246.667585117348,0,1.93866549219044,3.4324196319885,1.99613798001194,0,0,2.89999830173917,0,0,0,0,0,0,0.885741385813839,5.78862905401958,0,0.774054819518572,0.295547618953547,1.75508317723178,0,0,2.30850775511391,0,0,0,0,4.14701507651495,0.366390373607449,5.86338253620498,18.3947936752326,26.6866435871542,10.8037593235102,0,0,0,0,3.17873157960757,0,1.30586246527318,0,0,0,3.00755719311353,0,0,0,0,5.59429403739619,0.802577647298789,4.21676002305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| |||
|short_description=p1@LST1 | |||
}} |
Latest revision as of 21:59, 17 September 2015
Short description: | p1@LST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LST1_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 0bp_to_ENST00000376096, ENST00000376099, ENST00000376110, ENST00000488959_5end |
EntrezGene: | LST1 |
HGNC: | 14189 |
UniProt: | Q5STB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.71e-60 | 108 |
common myeloid progenitor | 3.71e-60 | 108 |
hematopoietic stem cell | 8.26e-60 | 168 |
hematopoietic oligopotent progenitor cell | 5.04e-55 | 161 |
hematopoietic multipotent progenitor cell | 5.04e-55 | 161 |
hematopoietic cell | 4.20e-54 | 177 |
myeloid leukocyte | 2.62e-52 | 72 |
macrophage dendritic cell progenitor | 5.20e-48 | 61 |
leukocyte | 2.32e-47 | 136 |
granulocyte monocyte progenitor cell | 1.94e-46 | 67 |
monopoietic cell | 2.42e-46 | 59 |
monocyte | 2.42e-46 | 59 |
monoblast | 2.42e-46 | 59 |
promonocyte | 2.42e-46 | 59 |
myeloid lineage restricted progenitor cell | 3.44e-45 | 66 |
defensive cell | 9.31e-42 | 48 |
phagocyte | 9.31e-42 | 48 |
hematopoietic lineage restricted progenitor cell | 6.00e-40 | 120 |
nongranular leukocyte | 1.44e-39 | 115 |
classical monocyte | 4.60e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.60e-37 | 42 |
intermediate monocyte | 1.10e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.10e-09 | 9 |
granulocyte | 5.45e-09 | 8 |
mesenchymal cell | 1.25e-08 | 354 |
connective tissue cell | 8.33e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.45e-49 | 98 |
blood island | 5.45e-49 | 98 |
hemolymphoid system | 5.03e-48 | 108 |
immune system | 8.37e-40 | 93 |
bone marrow | 5.39e-39 | 76 |
bone element | 4.64e-34 | 82 |
skeletal element | 1.42e-28 | 90 |
adult organism | 8.00e-27 | 114 |
skeletal system | 1.66e-24 | 100 |
lateral plate mesoderm | 1.73e-17 | 203 |
blood | 1.36e-08 | 15 |
haemolymphatic fluid | 1.36e-08 | 15 |
organism substance | 1.36e-08 | 15 |
musculoskeletal system | 6.85e-08 | 167 |
connective tissue | 4.94e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.72e-11 | 31 |
leukemia | 1.63e-08 | 39 |