FFCP PHASE1:Hg19::chr6:30584283..30584306,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:30584283..30584306,- | |||
|coexpression_cluster_id=C2557 | |||
|description=CAGE_peak_at_chr6:30584283..30584306,- | |||
|id=chr6:30584283..30584306,- | |||
|ontology_enrichment_celltype=CL:0002057!4.86e-11!42;CL:0000860!2.79e-10!45;CL:0000766!6.46e-08!76;CL:0000839!9.72e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.58e-22;33!CL:0002057;8.58e-22;33!CL:0000473;2.29e-16;39!CL:0000234;2.29e-16;39!CL:0000576;3.91e-11;48!CL:0000766;6.81e-10;69!CL:0000775;2.44e-08;3!CL:0000097;9.17e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.09e-20,72;CL:0000860,1.87e-17,42;CL:0002057,1.87e-17,42;CL:0000839,2.81e-16,66;CL:0000473,4.73e-16,48;CL:0000234,4.73e-16,48;CL:0000557,6.33e-16,67;CL:0002194,9.16e-13,59;CL:0000576,9.16e-13,59;CL:0000040,9.16e-13,59;CL:0000559,9.16e-13,59;CL:0002009,3.77e-12,61;CL:0000763,8.85e-11,108;CL:0000049,8.85e-11,108;CL:0000775,2.51e-08,3;CL:0000738,2.83e-08,136;CL:0000097,7.15e-08,5;CL:0002028,7.15e-08,5;CL:0002031,3.81e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;7.81e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.92e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.58e-13,76;UBERON:0002390,2.05e-12,98;UBERON:0003061,2.05e-12,98;UBERON:0002405,2.17e-12,93;UBERON:0001474,1.10e-11,82;UBERON:0002193,1.62e-10,108;UBERON:0004765,5.01e-10,90;UBERON:0001434,2.37e-08,100 | |||
|phase1_expression=0.726713517082227,0,0.281908808191942,1.0007329835313,0,0,0,1.26343974685366,1.04474251279935,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0,0.125542639594803,0.458480434487708,0.410502947249729,0.472264687882075,0.393364276848904,0,0.464448369948228,0,0.30120591877825,0,0,0,0.587200878669695,0,0.802177789880567,0.434021741431704,0.447830948479849,0.32389366601898,1.03030227053675,2.76256653681173,1.51150377475524,1.21292030593908,2.09186133215116,1.23350366406548,0.619412741790207,1.1507695692886,0.768482119587302,0.945928919554341,3.44745680736619,1.93645405075148,2.70852973188684,3.01187743268168,3.0019676506363,2.9214052977861,5.20342617030534,3.53021929783703,5.75403413219137,0.659702600373432,1.59570926097305,0.852449501065388,2.61188314765726,0.56738522469114,3.11411124497787,0,1.0429658368404,1.52032191293582,0.605399502633369,1.10483290796269,0.949387162322653,0.422510572623884,0.850417199860174,0,0.112328631146495,0,0.32145117339416,0,0.19891667719909,0,0,0,0,0.853460445133014,0.400395987036012,0,1.32208974556972,0,1.1384259382189,0,0.764546456250458,1.32171328579026,0,0,0.196709770113833,0.786021525498329,0.411202997999018,0.167186495390678,0,0,0,0.111410456885174,0,0.443067789167242,0.541607727530031,0.384273959177026,0.260118695119756,0,0,0.289803085735052,0.296573126324121,0.267540828089713,1.04535523804977,0.113309342697566,0.383220493601921,0,0.759059076058509,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0.604820229674197,0.267440195783507,0.868946423296794,0,0,0,0,0,0.289693037921647,0.795285947051099,0.973269740605272,0.189069634328136,0.443458794925128,0,0.654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0.417989933073621,0,0,0,0,0.760272105718513,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0.337834441449967,0,0,0,1.31780417436063,0,0,0,0.633152558322899,0.662045904066094,2.86836620748814,0.354668382198357,0.560677600142307,0,0,0.933633106199299,0.404132016209064,0.326923806226917,0.302714855289863,0,0,0.624320153660641,0,0.747243402759005,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,2.37600571456411,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0.438977620880838,0.30648779579902,0.45071417671979,0.113432183160021,0.538168907066586,0.427114777637135,0.423863802319124,0.600182192168805,0.309157587715317,0.515281080091258,0.18611685633159,0.337552664482532,0.389748020644795,0.504867548488229,0.184099797284599,0,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0.243947412259191,0.132529768321485,0.464775771478074,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0.482022059766964,0.110293972732394,0,0.474541238222193,0.134831308160164,0,0,0.738155454624648,1.40241773803446,0,0,0,0,1.77236972004421,0,0.122988438543114,0,0.548751427043128,0,0,0.277765335475589,0.325808305310325,0,0,0.115930404975077,0,0.288732895522148,0.925971025153221,0.190254152234598,1.58040879591855,0,0,0,0,0,0.671928512795438,0,0,0,0,0,1.49682337822484,7.87846839054934,3.31475892859011,4.67097003677606,0.063497894292169,1.52795370223311,1.17217447210047,0,0.308482478109971,0,0.857479297891735,0.224262168690721,0,0.1466765716419,0,0,0,0.531876233169741,0,0,0,0.799266537048298,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,1.2162378064119,0,0,0.479249710983165,0,0,0,0,0,0.224170287987055,0.394061520403854,0.215627574859517,0.77005821767849,1.52456774533478,2.60279707715243,0,0.335032530668698,1.27587750330633,7.49007023947182,14.9580729602012,9.11714129559278,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.521301686808497,0.587403472388222,1.02943027143257,0,0.431428401637234,0.533637789017222,1.21251028578504,3.32870879020994,0,0.496215615637554,0.153461973288062,0.280660094433074,0.896974044789907,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0.164254312027618,0,0.348631135379878,1.69203229428271,1.00253235151642,1.93370076765382,0.574072240823034,0.364182336013434,0.655622074797121,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0,0.219259876645935,0.261435451024901,0,0.328014645699706,0.325378394664303,1.23649213977267,0.183138929636687,0.330037999682352,0.574265537996172,0.650060246036521,0,0.870036464629098,0,0,0.137836572484531,0.107420244868274,0,0.255679882248303,0.623224249527161,0.330569830721956,0.192190067365106,0.382838137483752,0.708104465988849,0,1.88887408098384,0.6970372701606,0.616067160352178,0.532306030317022,0,0.37064843820784,0.572499546967965,0.372158369359667,0,0.38126038784765,0,0,0.318203247925937,0,0,0.274537029736055,0.235624804691373,0.606547444719948,0,0,0,0.487426979262569,0,0.545999645631943,1.1312434556297,0,0.551365343546124,0.66343897524122,0,0,0,0.405820753925408,0.6196469961995,0,0,0,0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| |||
|short_description=p@chr6:30584283..30584306,- | |||
}} |
Latest revision as of 23:35, 30 July 2015
Short description: | p@chr6:30584283..30584306, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:30584283..30584306, - |
Coexpression cluster: | C2557_Neutrophils_CD14_Mast_lymph_spleen_blood_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.09e-20 | 72 |
classical monocyte | 1.87e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.87e-17 | 42 |
myeloid lineage restricted progenitor cell | 2.81e-16 | 66 |
defensive cell | 4.73e-16 | 48 |
phagocyte | 4.73e-16 | 48 |
granulocyte monocyte progenitor cell | 6.33e-16 | 67 |
monopoietic cell | 9.16e-13 | 59 |
monocyte | 9.16e-13 | 59 |
monoblast | 9.16e-13 | 59 |
promonocyte | 9.16e-13 | 59 |
macrophage dendritic cell progenitor | 3.77e-12 | 61 |
myeloid cell | 8.85e-11 | 108 |
common myeloid progenitor | 8.85e-11 | 108 |
neutrophil | 2.51e-08 | 3 |
leukocyte | 2.83e-08 | 136 |
mast cell | 7.15e-08 | 5 |
basophil mast progenitor cell | 7.15e-08 | 5 |
hematopoietic lineage restricted progenitor cell | 3.81e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.58e-13 | 76 |
hematopoietic system | 2.05e-12 | 98 |
blood island | 2.05e-12 | 98 |
immune system | 2.17e-12 | 93 |
bone element | 1.10e-11 | 82 |
hemolymphoid system | 1.62e-10 | 108 |
skeletal element | 5.01e-10 | 90 |
skeletal system | 2.37e-08 | 100 |